Xiphophorus couchianus (Monterrey platyfish): 114143054
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Entry
114143054 CDS
T05908
Symbol
znf536
Name
(RefSeq) zinc finger protein 536
KO
K27242
zinc finger protein 536
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114143054 (znf536)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114143054 (znf536)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_assoc
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-H2C2_5
zf-C2H2_15
zf-Di19
zf-C2HE
zf-C2H2_7th_ZNF462
zf-C2H2_16
DUF7838
zf-C2H2_6
zf-C2H2_11
DUF7410
XRN_N
Motif
Other DBs
NCBI-GeneID:
114143054
NCBI-ProteinID:
XP_027870573
LinkDB
All DBs
Position
4:complement(32427162..32659610)
Genome browser
AA seq
1453 aa
AA seq
DB search
MEDSSLCLGVSSAVPDTDAHLSSAVLNGRYPISQKLHQLTAQLGHAFPDLHRPQQIPEEK
AVTPLDEKTHHAALASQPISSQMALLANQLNRDIDAGALSGLNGRVDLQQFLNGQNVGIM
SQMNDIEDDARKNRKYPCPLCGKRFRFNSILSLHMRTHTGEKPFKCPYCDHRAAQKGNLK
IHLRTHKLGNLGKGRGRVREENRLLHELEERAILRDKQMRGSGSLLQTAQTPHLVLNSSS
NTHQQQMPSACGPPPLSGLATPDTVSQPSSSPKPTNQDEQSVNPANGYRCTFCKGKFKKR
EELDRHIRILHKPYKCTLCEFAASHEEELISHVEKAHITAETTQGQGASGAGGMQMATEF
RCDVCGQVFSQAWFLKGHMRKHKDSFEHCCQICGRRFKEPWFLKNHMKVHLNKLAIKSKP
PQPSEQDMAAVNSMSNLAQEAHANLYSRYISCLQGGFLSPDKQGLSEQHQMLAKAGIAMK
EKEMLGKLLGPMAGGMAHGLGENEKRSLLGCLNLVPPLKSSCMERLQAAAKVAEMDSLNS
YQAWQIMARGMAMDRAFMPKEQQHQPHITPGQEDEISGAVALASYSKDKQDYSMIASSDS
SKQKQLSEGIQGSKASSGAMIPMKEDGRGFESHLISHHGGAEATGVLSGLGAPNIDYNLS
TLKEKPSECPDCGRVFRTYHQMIVHSRIHSKDRRGLDEALHQGVDERRGSASDPESQSIS
RSTTPGSSNVTEESGAGGGQSQTGSIQDDSPHPSSPSSDAGEDLAKAAVSLQPPPSQVRE
RSIGSSSKDCPYCGKSFRTSHHLKVHLRIHTGEKPYRCPHCDYAGTQSASLKYHLERHHR
ERQNGSNTSGSSSGHNTSSDHKDDPGKAGSGIFARPDVLRNVFKGMPANLDFRAGPLLPH
QWASAGIIAPHERDRDRGDRRFDSIHSAENLKTPDGQSPIVSAADGAASFSDLSRAYQSM
IGNGVHFQGSLQAFMDNFVLSSMKKDVADNHNPVQLPVQRYHDNGEPKVKRVVSSDQEKD
DKPEAKKHSETGKPGSQYEPLDLSVSVRPECGPGSLPGSSITVHDNVAWHGCLFCSFSTS
SLELMALHLQANHLGKAQMQRADAGKEIQQEGIPTNSTIHSSNIKSSALGLDREGDRDGE
KIQGVWNNHIDQPYNPFQSDFFRRFGGLYDGSSRVTPGLQGYIAEQGLELHNQVIGGTPL
AVDDQIGDRGSCGETEYDRIGSDEEITKAGEHSTCGTPSNTPKRPQLQNNSEEEDDDGRV
AEEEEERDDDEQMDLEKEEEGSPASDHSQSHAKQLQDDSSLTLMGNAGLAASSTTMKPLS
LVPQAQNQTLMLDKQWQQGLGLLSSEGASGLLKADPQAHLEQQMTMLSVLRAYSNDSTLT
FNGLGGGSGGSIMGGVKRSDGTAHLWLGEEDQPMIHDPALTLESNQLNNDLNHPNNHNLG
EPKGLDAHAGNKD
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggaggactccagtttatgtcttggtgtatcatcagcggtgcctgacaccgacgcccat
ctcagtagtgcagttttaaatggccgctaccccatcagtcaaaagcttcaccagctcact
gcccaactaggacacgcctttcctgacctgcaccgcccacaacagatccctgaggagaag
gctgtcacacctttggatgagaagacgcaccacgcagccctggccagtcaacctatcagc
agtcagatggccctgttagccaatcagctcaaccgagacattgatgcaggtgcgctaagt
gggctaaatggccgggttgatcttcagcaatttctcaatggccaaaatgtgggcatcatg
tcgcagatgaatgatatcgaagatgatgctcggaagaatagaaagtatccctgtccgctg
tgtggcaaacgtttccgttttaacagtatactttcactccacatgcgtacgcacacaggc
gagaaaccattcaagtgcccctactgcgaccacagagcagctcagaagggaaatttaaag
atccatcttcgcactcataaacttggaaatctgggtaaaggccgtggccgtgtcagagag
gaaaacaggctgcttcatgagcttgaggagagggccatcttgagagataagcagatgcga
gggagtggaagtcttctccagactgctcaaacaccccatcttgtcctcaacagcagctcc
aacacccatcagcagcaaatgccatcagcctgtggcccacctccactttctggcctcgca
actccagacacagtttctcagccatcttcttcaccgaagccaacgaaccaggatgaacag
tctgtgaacccagctaatggttaccgttgtacattctgcaaagggaaattcaagaagcgc
gaagaattagaccgccacattcgcattctccacaagccctacaaatgtactctatgtgaa
tttgctgcctcccatgaagaagaactgataagtcatgtggagaaagctcacatcacagct
gaaaccacacaaggacagggtgccagtggagctggtggcatgcaaatggccactgaattc
cgatgtgatgtctgtggccaggtattcagccaagcgtggtttcttaagggtcacatgcga
aagcacaaggattcctttgagcactgctgtcaaatctgtggccgtcgctttaaggagccc
tggtttctgaagaaccatatgaaggttcacctaaacaagctagccattaagagcaagcca
ccacagcccagtgagcaagacatggccgctgttaatagcatgagcaatctagctcaagaa
gctcatgccaatctctattcccgttacatctcatgtcttcaaggagggttcctttcacca
gacaaacaaggccttagtgaacaacaccagatgttggctaaagcagggattgccatgaag
gaaaaggagatgttaggaaaactgctgggaccaatggcagggggtatggcacatgggctt
ggtgaaaatgaaaagcgctcactccttgggtgtctcaatcttgtgccgccactcaagtcc
agttgcatggagcgccttcaagcagctgcaaaagtggcagaaatggattctctcaacagc
tatcaagcctggcagatcatggcacgtggtatggccatggacagggctttcatgcccaag
gagcagcagcaccagccacacataaccccagggcaggaagatgagataagtggtgctgtg
gccctggcttcctactcaaaggacaaacaagactattccatgattgcttctagtgatagc
tccaagcagaagcagctctctgagggcatccagggatctaaggcttccagcggagccatg
attcccatgaaggaggatggcagaggctttgaaagtcatctaatctctcaccatggtggt
gctgaagccactggagttctgtctggtttaggagccccaaacattgactacaatctttcc
accctgaaggaaaagccttcagagtgccctgactgtggccgcgtcttcagaacctaccat
caaatgattgtccactcccgaatacacagcaaagacaggagaggccttgatgaagctctt
catcaaggtgtagatgaacgtcgtggctctgccagtgaccctgagtcccagtccatcagc
cgttccacgactcccggttcatctaacgtgactgaagagagcggtgccggaggcggacag
tcccagacggggagcattcaagatgacagtccacatccctcatcaccttcctcagatgct
ggggaagacttggcgaaggcagcggtgagcctgcagccgcctccatcccaggtcagggag
cggagcatcggatcatcctctaaggactgcccctactgcgggaagtccttccgcacctcc
catcatctcaaagtccacctgcggatacacacaggagagaaaccctaccgatgccctcat
tgtgactatgctggcacccagtctgccagtctgaagtaccacctcgagcgccaccatcgt
gaacgtcaaaatggctccaacacatcaggctcgtcctctggccacaacacatcttcagac
cataaagacgatcctgggaaagcaggtagtgggatcttcgcccgaccagatgtactccgt
aatgttttcaagggcatgccagccaatctggacttcagagctggtccgctgctgcctcat
cagtgggcatcggctggtatcatagcgccacacgaacgagatcgcgatcgtggggatcgg
cgttttgattcgatccattcagctgagaacctgaagactccagatggccaatcccccatt
gtttcagcagctgacggtgctgccagcttctccgacctgagcagggcttaccaaagtatg
atagggaacggagtccacttccaaggttctctccaagctttcatggacaattttgtcctc
agctctatgaagaaagatgttgctgacaaccacaaccctgtccagctcccagttcagcgt
taccatgataatggtgagcccaaagtcaaacgtgttgtctcaagtgaccaagagaaagat
gacaaaccagaagccaagaagcattcagagactggaaagcctgggtcccagtatgaacct
cttgatctttctgtatcagtacgtcctgagtgtggacccggatccctgcctggctcctcg
atcactgttcacgataacgtggcttggcacggctgcctcttctgctctttctctacttcc
tctttggagctcatggctctacatcttcaagctaaccatctgggtaaagcccaaatgcag
cgggctgatgctggcaaggagattcagcaagagggtattcccaccaactctaccattcat
tcttccaatatcaagagctctgctttggggctggacagagaaggagacagagatggtgag
aaaatccagggagtttggaacaaccacattgaccaaccttacaaccccttccagagtgat
ttcttcaggaggttcggtggtctgtatgatggctcttcaagagttaccccaggccttcaa
ggttatatagcagagcagggactggaactgcacaatcaggtcattggaggaacaccatta
gctgtggatgaccagattggtgacaggggttcctgtggagaaactgagtatgaccgcatt
ggatcagatgaagaaatcacaaaagctggggagcacagcacatgcgggaccccttcaaac
accccaaagagaccacagctacagaataactctgaggaagaggatgatgatggtagagtg
gccgaagaagaggaggaaagagatgatgatgaacaaatggacttggagaaagaggaagaa
ggcagtcctgcttctgaccacagccagtctcatgctaaacagctgcaagatgactcttct
cttactctaatgggcaatgctggtttagcagcatcctccaccaccatgaagccactgtct
ctggttccccaagcccagaaccaaaccctgatgctggacaagcagtggcagcagggcctg
ggcctcctgtcctcggaaggtgcatcgggacttttgaaggctgatccgcaggcccacctg
gagcagcaaatgaccatgctgtctgtcctccgcgcctacagtaatgactccacccttacg
ttcaacggcctgggaggcggaagtggcggatcaatcatgggcggcgtgaagaggtctgat
ggaaccgcacatctgtggctaggagaggaggaccagcccatgattcatgaccccgcgttg
accctcgagtccaaccagcttaacaacgatcttaaccaccctaacaaccataacctgggt
gagcctaaggggctggacgcccatgctggaaacaaagactaa
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integrated database retrieval system
