Xiphophorus couchianus (Monterrey platyfish): 114143065
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Entry
114143065 CDS
T05908
Symbol
usp8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X1
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04137
Mitophagy - animal
xco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114143065 (usp8)
04137 Mitophagy - animal
114143065 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xco01002
]
114143065 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114143065 (usp8)
04121 Ubiquitin system [BR:
xco04121
]
114143065 (usp8)
Enzymes [BR:
xco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114143065 (usp8)
Peptidases and inhibitors [BR:
xco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
114143065 (usp8)
Membrane trafficking [BR:
xco04131
]
Endosome - Lysosome transport
Others
Others
114143065 (usp8)
Ubiquitin system [BR:
xco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
114143065 (usp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Motif
Other DBs
NCBI-GeneID:
114143065
NCBI-ProteinID:
XP_027870596
LinkDB
All DBs
Position
4:24118253..24131059
Genome browser
AA seq
1079 aa
AA seq
DB search
MPAVSTGAKELYLSTSLGDLNKKAEIKPDKTSTRSYVQSACKLFKAAEECRLDRDEEKAY
VLYMKYLTVYDIIKKRPEFKQQPDYYMTMLGANSFKKAIEEAEKLSESLKLRYEEVEVRR
KLEEKERLEEKKKREEVTEKDGRNSPKASTINKKDSKKAKGEQNELKSVITKAAQPAGGI
TAEKLFNMMKDQTISVLVMDARSHRDYEESHMQVPAQTCISVPEEAVSPGITVTLIEAKL
PDASKDHWRRRGVVDYVVLLDWFSSASDLKLGTTLMSVKDAIYKWDSLTIMRSEPLVLEG
GYENWLLFYPMYTTNAKVRPPRQTITNSLPQLNFSYPSLEEPKPPTPTPPEREISPEPQE
PAAPALVNGVSPAEPPASKTSVVADRLPDTVDLPITVPTNSGLDLSKKDPAVSQSPTTAR
VFPQYDRAKKPSVPVSDQTKSGQNRSAIDSTQNGPIIPDRSAKPPLSSGGSLSKDEQQQI
HSEAVAVMEKAKQEQEKRNQERRLEEERRENEQKEREESEKRKKEEEEKRHQEKKRLERQ
TAEEEEDKEKKVWDDRERRGKEQNPDTPSKSMSLDSPAPNHIVSEIKREPLTRARSEEMG
RSVPGLPDGWMKFLDTVTGTYRYYHSPTNRVHLYPPEVTVPQTPPSTPPTAKPRSQKPAE
PDTSHDREREQSKLKRSYSSPDISQEVSEEAQKKTTAPTAAAVIPTINRETKPPSVKVYS
KVESVRPSAAKLRNLNPSFGGLGASLTGLRNLGNTCYMNSILQCLCNTPRMADYFNNNLY
LEDINRSNILGHKGEVAEEFGVIMKALWAGLYKCISPRDFKSTIGKINDQFAGYDQQDSQ
ELLLFLMDGLHEDLNKADNRKRYKEEENDHLDDQNAANVAWNKHKLLNESIIVALFQGQF
KSTVQCLTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNKVFCRHCKA
HRDSTKKLEIWKVPPIVLVHLKRFSYEGRWRQKLQTSVDFPLDSLDLAQYVIGPKQNLRR
YNLYAVSNHYGGLDGGHYTAYCKNSLKQRWYKFDDHEVTEISSSSVKSSAAYILFYSTL
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagtctccacaggggccaaggagttgtatttatccacatctctaggcgacctc
aacaaaaaagctgaaattaagccagacaaaacgagcaccagaagctatgttcagagtgcc
tgcaaactgttcaaggcggcagaggagtgtcgtcttgacagggatgaggagaaagcttat
gtgctgtacatgaagtacttgacggtttatgacatcataaagaaaaggccagaattcaag
cagcaaccggattattacatgactatgcttggagcaaatagcttcaagaaagccattgaa
gaagccgagaagctgtctgaaagccttaaactcaggtatgaggaagttgaggtgcggaga
aagcttgaggagaaggagcgattagaggagaagaagaaaagggaggaagtaacggagaaa
gatggtcgaaattctccaaaagcctcaacaataaacaagaaggacagcaaaaaggcgaaa
ggagagcagaatgaactgaaaagtgtcatcactaaagctgcacaaccagcaggtggcatc
acagctgagaaactttttaacatgatgaaagatcagaccatatcagtactggtgatggat
gctcgcagccacagggactacgaggagtctcacatgcaggtcccggctcagacctgcatc
agtgtgccggaagaggccgtcagcccaggaatcactgtgactctgattgaggcgaagttg
cctgacgcatctaaagatcactggagaaggcgaggagttgttgactacgtggttctgctt
gactggtttagttctgcatctgaccttaaattaggcaccactttgatgagtgtaaaagac
gccatttataagtgggacagcctaaccattatgcgtagtgagccactggtgctggaggga
ggctatgagaactggctgctgttttatccaatgtatacgaccaacgctaaagtccgaccg
ccgaggcaaacaatcaccaacagcctaccacagctgaactttagctacccgtctttggag
gaaccgaagcctccgactccaactccacctgagagagagatttcacctgaacctcaggaa
ccagcagctcctgctctggtgaacggcgtctcacccgctgagccgccagcatccaaaacc
tccgtggttgctgacaggttgccagataccgttgacctcccgattacagtacctactaat
tctggtttggacctgagtaagaaggatcctgcagtcagccagtcgcctacaactgccaga
gttttcccccagtatgacagagccaagaaaccgtctgtcccggtgtccgatcaaaccaag
agcggccagaaccggtctgcgatagattcaacccagaacggccccatcatccctgaccgc
tcagctaaacctccactcagctccggcggttctctgtccaaagacgagcaacaacagatc
cactccgaggcggtggccgtgatggagaaggccaaacaggaacaggaaaaacgcaaccag
gagcgccgcttggaagaggagcggcgggagaacgaacagaaggagagggaggaaagtgaa
aagaggaagaaggaggaagaggagaaaagacatcaggagaagaagagacttgaaaggcag
acggcagaggaagaggaagacaaagagaagaaagtatgggatgacagagagcggagggga
aaagaacaaaacccggacacgccttcgaagagcatgtctctggattctcctgctcccaac
catattgtgagtgaaatcaagagggagcctctgactagagcaaggagtgaggagatgggt
aggagtgtgccaggcctccctgatggttggatgaagtttttggacacagtgactgggacc
tacagatactaccactcccctacaaaccgcgtccacctttaccctcccgaggttaccgtc
cctcagaccccaccgtccaccccgccgaccgccaaacctcggtcccagaagcccgccgag
cccgacacgagccacgaccgagaacgggaacagtccaagctgaaacgttcctactcttct
ccggacattagccaggaagtgagcgaggaggcgcagaaaaagacgaccgctccaaccgct
gctgcagtgatacccaccatcaacagagaaaccaaacctcccagtgtaaaggtttactct
aaagtggagagcgtgcggccgtctgcggctaagcttcgcaacctgaatccctccttcgga
ggtttgggtgcatcgctgactggccttcgaaacctaggaaacacctgctatatgaactcc
atcctgcagtgtctctgcaacactcctcgcatggccgattacttcaataacaacttgtac
cttgaagacatcaacaggtccaacattcttggccataaaggggaggttgcagaggagttt
ggagtgataatgaaagcgctgtgggccggtctgtacaagtgcatcagtccccgggacttc
aagagcaccataggaaagatcaatgatcagtttgcaggctatgaccagcaggactcccag
gagctgctcctgttcctgatggacggcctgcatgaagacctcaacaaggccgacaacagg
aagcggtacaaggaggaagaaaacgaccacctggatgaccagaacgcggccaacgtggcc
tggaacaagcacaagttgctgaacgagtccatcatcgtggcgctgttccagggtcagttc
aagtccacggtccagtgtctgacctgccatcgcaaatcacgcacctttgagaccttcatg
tacctgtcgctgcctctggcctccaccagcaagtgctccctgcaggattgtctgaggttg
ttctctaaagaggaaaagctcaccgacaacaacaaggtgttctgcagacactgcaaagcc
cacagagattccaccaagaagctggagatctggaaggttcctcctattgtcctggttcac
ttaaaacggttctcctatgaaggccgatggaggcaaaaactacaaacatctgtcgatttc
cctctagacagtctggacctggcccagtatgttatcgggcccaagcagaacctgaggaga
tacaacctttatgccgtgtctaatcactacgggggcttagacggcggccactacacggcc
tactgtaagaactccctcaagcagcgctggtacaagttcgatgaccacgaagtgacggaa
atctcctcgtcttcggtcaagtcatccgcagcctacatcctgttttactccaccctgtga
DBGET
integrated database retrieval system
