Xiphophorus couchianus (Monterrey platyfish): 114143071
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Entry
114143071 CDS
T05908
Symbol
bbs4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein isoform X1
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114143071 (bbs4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xco03037
]
114143071 (bbs4)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
114143071 (bbs4)
Cilium and associated proteins [BR:
xco03037
]
Primary cilia and associated proteins
BBSome
114143071 (bbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_19
TPR_11
TPR_14
ANAPC3
TPR_12
TPR_16
TPR_CcmH_CycH
TPR_17
TPR_6
TPR_9
ARM_TT21_4th
TPR_7
TPR_Slam
TPR_15
ARM_TT21_2nd
ARM_TT21_N
NatA_aux_su
Wzy_C_2
ARM_TT21_C
PknG_TPR
HAT_PRP39_C
ChAPs
CotJB
Motif
Other DBs
NCBI-GeneID:
114143071
NCBI-ProteinID:
XP_027870601
LinkDB
All DBs
Position
4:26493056..26522853
Genome browser
AA seq
594 aa
AA seq
DB search
MADAENATVLTLPTEAKKRRAPKAPELPIVERRNWLIHQHYVRKDYETCKVIIKEQLQET
NGMCEYAIYVQALILRLEGKIQESLELFQSCAILNPSSSDNLKQVARSLFLLGKHKAAIE
FYHEAAKLNEKDWEISHNLGVCYYFIKDFKIAEEHLNAALQTNKHDKTFVMLGKVHLLAG
DADKAIEVYKRAVEFSPENTELLTTLGLLFLELGKYQKAFEHLGNALTFDPNNYKAILAA
GSMMQTHGDFDVAMNKYRVAACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRAHYLSPF
DWKVLYNLGLVHLTMQQYASAFHFLSAAINLNPRMGELYMLLAVALTNLEDVENATRAYE
QAVNLDDLHRPNPMVNLNFAIFLYNHGDKKRALDQYQEMERKVNQLRDSSSNFEFDLELM
DMAQKMGAVLQVTDTLVWTKPSKDSKAKPHSAAAAKTPGVPLGTNQALGQAMSSAASYNK
NIQLTTGVSKGPSTSLEPEPDVENVPSPPTDPPGCPEPEDPDGSKPRTSKRRSKDGSVVE
GGQAGGGCWGIQVIAVGAAQGAARRLGRNPERTSECWDEDPGEDLQEGRQETSM
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcggagaacgctacggtgctgacacttcctactgaagccaagaagcgccgt
gcacctaaagctccagagcttcctattgtggagagaagaaactggctgatccaccagcac
tatgtgcgcaaagactatgagacctgtaaggtgatcattaaagagcaactccaggaaacc
aatgggatgtgtgaatatgccatatatgttcaagcactaatcttacgtcttgaggggaag
atccaggagtccctggagctgtttcagagctgcgccatccttaatcccagcagctcagac
aacctcaagcaagtggcccgatcactatttcttcttggaaagcacaaagcagctattgag
ttctatcatgaagcagcaaagcttaatgagaaagactgggagatcagtcataacctgggt
gtgtgttattacttcatcaaagatttcaaaattgctgaggaacatctaaacgccgctctg
cagacaaataaacatgacaagaccttcgtgatgctcgggaaagttcatctgctggctgga
gacgctgacaaggccatcgaagtgtacaagagagcagtggaattctctccagagaacact
gaactcctgaccactctcggcctcctttttttggagctcgggaagtaccagaaagcgttc
gagcatcttgggaatgccctcacttttgaccccaacaattataaggccatcctggccgca
ggcagcatgatgcaaacccacggtgactttgatgtggccatgaacaagtacagagtggca
gcgtgcgccgtgccggagagcccccctctctggaacaacattggcatgtgcttctttggc
aagaagaagtacgtggcggccattagctgcctgaagcgcgctcactacttgtctcccttt
gactggaaagtgttgtacaacctggggctggtacacctgaccatgcagcagtacgcctca
gctttccatttcctcagcgcagccattaatctgaacccacggatgggggaactctacatg
ttgctggcagtcgctttgactaatttggaagatgtagagaatgccaccagagcatacgaa
caagctgtgaatcttgatgacctccacagacccaaccccatggtcaacctgaactttgca
atattcctctataatcacggagacaaaaagagagctctggatcaatatcaggagatggaa
aggaaagtcaaccaactacgggacagcagtagcaactttgagtttgatctggagctgatg
gacatggctcagaagatgggcgctgtcctgcaggtaacagatactctggtttggactaaa
cccagcaaggactccaaagccaagcctcactctgcagcagcagccaaaaccccgggagtt
cctctcggcaccaaccaagctctgggtcaggccatgtcttcagctgccagctacaacaag
aacatccagctaacaacaggcgtttccaaaggcccctccacatctctagagccagagcct
gatgtagaaaacgtccccagcccaccgactgaccctccaggctgtccagaacctgaagat
ccagatgggtccaaacccagaacctctaagaggagatctaaggatggatcggtggtggag
ggtggacaggcaggcggaggctgctggggaatccaggtaattgctgtaggagcagcccag
ggagcagcaaggaggctagggaggaatccagagcgaacgtctgagtgttgggatgaggat
ccaggcgaagacctccaggagggacgacaagaaacaagcatgtag
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