Xiphophorus couchianus (Monterrey platyfish): 114143086
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Entry
114143086 CDS
T05908
Symbol
tshz3
Name
(RefSeq) teashirt homolog 3
KO
K09236
teashirt
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114143086 (tshz3)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114143086 (tshz3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2H2_2
zf-C2H2_6
Zap1_zf1
zf-met
Zf-C2H2_ZNF451
zf-C2H2_3rep
Homeobox_KN
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
114143086
NCBI-ProteinID:
XP_027870644
LinkDB
All DBs
Position
4:32272541..32320060
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AA seq
1229 aa
AA seq
DB search
MPRRKQQAPRRAAAYVPDDEKEVALLDEDLDGEDSAQEGEEPASKLLCQDKDFLFKDRPE
SAGIHDSPNAADFSGQDLDSESHLSESSDRMSDFESSSLKNEDDVLLSKDLSNELSPSSS
SAVMAATNAAASVTGDEAILAATSSVADSLEKMKAIYTSFLSNSYWSTLNLNLSQPPAEK
PPRSHSSSSSSSSSSSCGSGGYDWHQSAVAKSLQQASQNHHNRLSLVQHPTVAVTTASTE
PNLFSTVQLYRQSSKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETD
SEGAKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVPLKE
PVTPVAAKIISSARKRAPVDLDLPSSPDSNGGTTPKPASFSDANDILQKISNPYITPNNR
YGHQNGASYAWQFESRKSQILKCMECGSSHDSLQELTAHMMVTGHFIKVTNSAIKKGKPI
LESQAPTSNSSVEEKIQSVPLAATTFSSPPAPVPPPTSISPMAMVVEIKKEEKEEECTQE
SNIINANNHNKDKRTEVEDESEVKFDISSKYTYLTEEDLDESPKGGLDILKSLENTVTSA
INKAQNGAPSWGGYPSIHAAYQLPNIMKLSLGNSGKSSPLKYMFSGGEILSPTGKSQPLI
SPPSCQTSPLPKNNFQAMEELVKKVTEKVAKVEEKMRDPGMIASDLPLRRTTPSPCVSEA
EDLIRGESPKRHTAGDCKTPENTSVGEVVQDGKGTNEKDSSSSASTKESGENGVEPTAVT
PPLPASLCGSTAIITDHPPPEQPFVNPLSALQSVMNVHLGKAAKPAMPSLDPMSMLFKMS
NSLAEKAAVASSTPPAHTKKTSNGHLDRYFYQQHLNNDQPIDLTKGKHADKGSNGGSLGS
TTLSSTNSTPSISPSSAVTMTKASATIASFMSTSPLRENALSDISDMLRNLTESQALSKS
STPTSQSERSDIEGATQEEIEDVSPAQKRKGRQSNWNPQHLLILQAQFASSLRQTNDGKY
MMSDLSPQDRMHISRFTGLSMTTISHWLANVKYQLRRTGGTKFLKNLDSGHPVFFCSDCA
SQIRSPSTYVSHLESHLGFRLRDLAKLSGEQLLSQLSQQHHHQHQRHTKGLSEKLFSNLH
PSSHPLPSSLPTSVPVSLPISLSSSLTTSMPSTESPSSSPDDDECGAVYQCKLCNRTFAS
KHAVKLHLSKTHGKSPEDHLMYVCELEKQ
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggaggaagcagcaggcgccccggcgcgccgcagcttatgtccccgacgatgag
aaggaagtagccttgttggacgaggaccttgatggagaagactctgctcaagaaggggag
gagcctgcaagcaagctcctatgtcaggacaaggatttccttttcaaggacaggccagaa
tccgctggcattcacgactcccccaatgcggcggacttttctggtcaggacctggacagc
gagtctcacctgagtgaatcctcagacagaatgtctgattttgaaagctcctcattgaaa
aatgaggatgacgtccttctttctaaagacctttccaacgaactgtccccctcctcctct
tcagcagtcatggctgcaaccaatgctgccgcctcggtaaccggagacgaggccatattg
gctgcaacaagttctgtggctgacagcctcgagaaaatgaaggcaatttacacttccttc
ctgagcaattcctattggtcgacactgaatctgaacttgagtcagccaccagcagaaaag
ccccctcgtagtcacagcagcagcagtagtagcagcagcagcagcagctgtggtagcgga
ggctatgactggcaccagtctgctgtggctaaaagtctccagcaggcttcccagaaccac
cacaacagactgagcttggtgcaacatcccacagtggcggtgacaacagcttctacagaa
cctaacctcttcagcactgttcagctgtaccggcagagctccaagctctacggctccata
ttcactggtgccagcaaatttcgctgtaaggactgcagtgctgcgtacgacactctggtg
gagctcacggtgcacatgaacgagacgggccactatcgtgatgataaccatgagacagac
agcgagggggctaagcgctggtccaaacccaggaaacgctccctactagagatggaaggg
aaggaagatgcacaaaaagtacttaagtgtatgtactgtggacactcctttgaatccctt
caggatctcagcgtccacatgatcaagacaaaacactaccagaaagtgcctctgaaagaa
cctgttacacccgtagctgccaagataatttcctctgctcgaaaaagggccccggttgac
ctggacctccctagttcacccgactctaacggaggcaccacaccgaagccagcctcgttc
agtgatgctaatgacattctgcagaaaataagcaacccctacattacacctaacaatcgc
tatggacaccaaaatggtgccagctacgcctggcagtttgaatccaggaagtcgcaaatc
ctcaaatgcatggagtgtggcagctcacatgactcactgcaggaactaactgctcatatg
atggtgacagggcactttattaaggttaccaattctgccataaagaaaggcaaaccaatt
ttagagtcccaggcccccacatccaactcttcagttgaagaaaagatccagtcagttccc
ctggctgccacaacgttctcctctccacccgcccccgtgcctcctccaactagcatctca
ccgatggcaatggttgtggaaattaaaaaagaggagaaggaagaagaatgtacccaagag
tccaacattatcaatgccaataaccacaacaaagataagaggacagaagtggaagatgaa
tctgaagtgaagtttgatatttcttcaaagtacacctatctgactgaagaggatctggat
gaaagtccaaaggggggccttgacattctcaagtccttggagaacacagtgacctcagcc
atcaacaaagcccagaatggcgctcccagttggggtgggtaccccagcatccatgcagcc
taccagcttccaaacataatgaagctctctcttggcaattctggaaagagctctcccctt
aaatatatgtttagtggaggggagattctctcccctactggcaaaagtcagccactgatt
tctcctcccagctgccaaacctctccactacctaaaaacaactttcaagcaatggaagag
ctagttaaaaaagtgacagagaaagtagctaaggtagaggagaaaatgagagaccccggt
atgattgcgagtgatttacctctgaggcgaaccacgccctcaccctgtgtcagtgaggca
gaagatctaatccgaggagagtcgcccaaaagacacactgcaggagactgtaaaacccca
gaaaatacaagtgtaggggaggtagtacaagatggaaagggaacgaatgaaaaagattcc
agtagtagtgcttccacaaaggagtctggggagaatggagtggagcccactgctgtaaca
cccccactgcctgcctctctgtgtggcagcacagctattatcacagaccatccacctcct
gaacagccgtttgtcaaccctctcagcgctctgcagtcagtaatgaacgtccacctgggg
aaggctgctaaaccggccatgccctcgcttgaccccatgagcatgttgtttaagatgagc
aacagtctggcagaaaaagcagcagtggcttcctccaccccaccagcacacaccaaaaag
accagtaatggacatttagatcgctacttctaccagcaacatctcaacaacgaccaacct
atagatctcactaaaggaaaacatgctgataaaggaagtaatggtggttctttgggttca
actacactttcttctactaactccaccccatcaatttctccctcttctgctgtcactatg
acaaaggcctccgctacaatagcttccttcatgtccacgtcacctttgagagaaaatgcc
ctgtcagacatctccgacatgctgagaaacctcacagaaagccaagctctgtccaagtcc
tccacgccaaccagtcagtctgagcgctctgacatcgaaggtgccacacaagaggaaatc
gaagatgtttcacctgctcagaagcgcaaaggccgccagtccaactggaaccctcaacac
ctccttatattacaagcccagtttgcttccagcttgaggcaaacaaatgatggcaaatac
atgatgtctgacctgagcccacaggacaggatgcacatctcccgtttcacaggtctgtca
atgactacaatatcccactggctggccaatgtgaagtatcagctaagaagaactggtggc
accaagttcttaaaaaacttggattcaggccacccagtgttcttctgcagtgactgcgca
tcccagattcgctcaccgtccacctacgtcagccacctggaatcccacttaggctttcgt
cttcgcgacctggctaaactttctggggagcagttgctcagtcaattatcgcagcaacac
catcaccaacatcaacgccacaccaaaggactttctgaaaaactcttctccaatctccac
ccatccagccacccgctcccatcctccctcccgacctctgtaccagtatcactaccgatc
tcgctctcctcgtccttaacaacgtctatgccgtcaactgaatctccatcgtcctctcct
gatgatgatgaatgcggcgcggtctaccagtgcaagctctgcaaccggacatttgcgagt
aagcacgctgttaaacttcacttgagcaagacacatgggaaatcccccgaggaccatctg
atgtatgtgtgtgagctggaaaaacagtag
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integrated database retrieval system
