Xiphophorus couchianus (Monterrey platyfish): 114143114
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Entry
114143114 CDS
T05908
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03082
ATP-dependent chromatin remodeling
xco03083
Polycomb repressive complex
xco04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114143114
03083 Polycomb repressive complex
114143114
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
114143114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114143114
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
114143114
Histone modification proteins
HAT complexes
HATB complex
114143114
HDAC complexes
Sin3A-HDAC complex
114143114
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
114143114
PRC2.2
114143114
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
114143114
Heterochromatin formation proteins
Other heterochromatin formation proteins
114143114
Chromatin remodeling factors
NuRD complex
114143114
NuRF complex
114143114
NuRF complex (fruit fly)
114143114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF12
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
MIOS_WD40
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
114143114
NCBI-ProteinID:
XP_027870690
LinkDB
All DBs
Position
4:33838043..33845543
Genome browser
AA seq
426 aa
AA seq
DB search
MAEKEVYDDAVEERVINEEYKIWKRNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
TVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLKGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGTGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKASHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSSEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDNTPAS
ELEAQG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaggaggtgtacgatgatgcagtggaagaaagggtcatcaatgaagaatac
aagatctggaagaggaacactccatttctgtacgacctggtcatgacccatgccctggag
tggcccagtctgactgtgcagtggcttccagatgtcaacaggccagaggggaaggactac
acagtccaccggctggttctggggacccacacatcagatgagcaaaaccatcttgtaata
gccagtgtccaggtaccaaacgacgacgcccaatttgatgcatcacactacgatagtgaa
aaaggagcagagtttggtgggtttggctcagtgagtgggaaaatagagattgagatcaag
attaaccatgaaggagaggtgaaccgagcacgctacatgccccagaatccctgcattatt
gccaccaaaactcccacatctgacgttctggtctttgactacaccaagcacccatcaaag
ccagatcccagtggggagtgcagtcctgacctgaggctcaaaggtcaccagaaagaaggt
tacggcctttcctggaatccaaacctcagtggcaacctgctcagtgcctctgatgaccat
accatctgtctgtgggacatcggcaccggcccaaaggaaggaaaaattgtcgacgctaag
accatcttcactggtcacaccgcagttgtggaagacgtgtcgtggcatttactccatgaa
tccttgtttggctctgttgctgatgatcagaaactaatgatatgggacactcgttccaac
aacacttctaaagccagccactcggttgatgctcacactgctgaggtcaactgtctgagc
ttcaatccctacagcgagttcattcttgctacaggttctgcagataagactgttgcattg
tgggatctaaggaatctcaaactgaagctccactcttttgagtcccacaaggatgaaatt
ttccaagttcagtggtcgcctcacaatgaaaccatcctggcctccagcggtaccgaccga
cgtctcaacgtctgggatctcagcaaaattggggaggagcagtcttcagaggacgctgag
gacggcccaccagagcttctgttcattcatggtggccacacggccaagatatcagacttc
tcctggaaccccaatgaaccctgggtcatttgctccgtgtccgaagacaacatcatgcaa
gtctggcagatggcagagaatatctacaatgatgaggagccagacaacacacccgcatca
gagctggaagctcaaggataa
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