Xiphophorus couchianus (Monterrey platyfish): 114143167
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Entry
114143167 CDS
T05908
Symbol
nfatc3
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 3 isoform X1
KO
K17333
nuclear factor of activated T-cells, cytoplasmic 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04020
Calcium signaling pathway
xco04148
Efferocytosis
xco04218
Cellular senescence
xco04310
Wnt signaling pathway
xco04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114143167 (nfatc3)
04310 Wnt signaling pathway
114143167 (nfatc3)
04020 Calcium signaling pathway
114143167 (nfatc3)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114143167 (nfatc3)
09143 Cell growth and death
04218 Cellular senescence
114143167 (nfatc3)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
114143167 (nfatc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114143167 (nfatc3)
Transcription factors [BR:
xco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
114143167 (nfatc3)
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
114143167
NCBI-ProteinID:
XP_027870766
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Position
4:10632694..10696707
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AA seq
1097 aa
AA seq
DB search
MTTANCPGNEELDFRLIFGEDGQQQPLGPADLEPDDNTSFYILNMGQPQAMVTNHQSIGL
PRHGMHTHPQVISTSPRLPSHKTGTDLLSYEAQGSKYGTSPLLPSAPVEAPKAFECPSIQ
ITSISPSCQQELDASEGELTANGPDGDYHGDRPLSRDHLYLPLDHSYRDSSLSPSPCSSL
SSRSWFSDASSCESFSHVYDDVDSELNEAAARFSLGSPLTSPVCVSPQAVGGVLEEQSPW
QHHHPPFVHHSHSTLSPRQSPCHSPRNSVTDENWLSPRSPSRPSSRPTSPCGKRRHSSAD
ICYPGSLSPHHSPTPTPGHSPRGSVTEDTWAGSPTIGMSAFQCCPSETDIPSKTRKTSQD
RTSLQTGKGELALDDQENLSSNLDSPPDDTLHSMKKDGPAEQFLSVPSHFSWNKPKPGHT
PIFRTTSLPPLDWPLPSQFGQYELKIEVQPKAHHRAHYETEGSRGAVKAASGGHPIVKLT
GYNDKPVNLQMFIGTADDRYLRPHAFYQVHRITGKTVATASQEILLSSTKVLEIPLLPEN
GMSASIDCAGILKLRNSDIELRKGETDIGRKNTRVRVVFRVHIPQPNGKVLSLQAASIPV
ECSQRSAQELPQVEKFSLTSCLVSGGEEMVITGSNVFPESKVIFLEKGPDGRPQWEVEAK
IIREKTQGSCIVVEIPPYHSKTVTSAVQVQFYVCNGKRKRSQSQRFTYLSGWFGGMMVKQ
EHRDELDLTAVPPISMPLAHAPSLVHPQLPSPDQGHPSDNLMSSSLHSLATGSGPGLLPL
PGPCSSLSSPPFQHLPHLQGHSLHHPPADCHMTFHQGSAPAPPRPTYQPLQHSPSHNLSF
NGQPSLSSQSYERMPFQQSPTAASHPIGLGIVYSSSCSSPSALSSSPTNPIVGSPQNHQP
MLSPSSPHLHTLGGFHCSPNPSQVPSQGGHPLSGQHSSQLQRGLGYHPVSQRSASCPTPS
TAPQQRMIPSPHSGPSSPQVHPLPYQSPPSSSPTSAGSPLGPLQQHSGQPSPQATSPVMT
SLSPAAVGPLVHPLSPQGPFPSEGERLNIKQEPEEREPTFRSIGLQDITLDDVNEIIGRD
MSQSPSAHGPQSAHNHS
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgactactgcaaactgccccggcaatgaggagctggacttcagactgattttcggagag
gacgggcagcagcagcctttaggccccgcagatctggagcctgatgacaacacatcattc
tacatcctaaatatgggccagccccaggctatggtcacgaaccaccagtctattggcctg
cctcgtcatggcatgcacacccatcctcaggtcatcagcacttcaccgcgacttccatca
cacaaaacaggaactgatctcctaagttacgaggcacaaggctccaagtatggcacctca
ccgctgctgccctctgctcctgtggaggcaccaaaagcctttgagtgccccagtatccag
atcacctccatctcccctagttgccagcaagagctagatgccagtgagggggagctgaca
gccaatggtcctgatggggattaccacggcgacagacccttgtccagagaccatctatat
ttgccactggaccactcatacagggactcttcgctcagccctagcccctgcagcagcctc
tcctctaggagctggttctctgatgcttcatcttgtgaatcgttttcacatgtctatgac
gatgttgactcagagctgaatgaagcagctgcaaggtttagtctgggctcccctctgact
tctccagtttgtgtgtcaccgcaggctgttgggggagttctagaggagcagtccccatgg
cagcaccatcatcccccctttgtgcatcactctcactccactctttctcctcgacagtcc
ccctgccattcaccacgcaatagcgtcactgatgaaaattggcttagtccacggtctcct
tccaggccctcttcgcgaccaacctcaccctgcgggaaaaggcgacactccagtgccgac
atttgctatcccggttcactgtctcctcatcactcacctacacccacgccaggacattcc
cccagggggagtgtgacagaggacacatgggctgggagtcccactataggcatgtcagct
tttcaatgctgcccatctgagacagacatcccatcaaagacaaggaagacctcacaggac
agaacatctctgcagacagggaaaggagagctggcattagatgaccaggaaaatctgtct
tctaaccttgattctcctccagacgacacgctgcacagcatgaagaaagatgggcctgca
gaacagtttctgtctgtgccctcgcacttctcatggaataaacccaagcctggtcataca
cctattttcaggacaacctcgctccctcctttagactggccgttacccagccaatttggc
cagtatgagctgaagatagaggtgcaacccaaagcccaccaccgtgcacactatgagact
gaaggcagccgaggagctgtcaaagcagcatctggtggccatccaattgtcaagctcact
ggctacaatgacaagcctgtgaatctgcagatgtttataggaaccgcagacgaccgctac
ttgaggccacatgccttttaccaggtgcatcggatcaccgggaagactgtagcaacagcc
agccaagaaatcctgctttccagcaccaaagttcttgaaatccctctgcttcctgaaaac
ggcatgtcagccagtattgactgtgctggcatactgaagctgcggaactcggacatcgag
ctgcggaagggggagacggatataggacgaaagaacacacgggtccgcgtggttttccga
gtgcacatccctcaacccaacgggaaagtgttgtccctgcaagctgcctctattcctgtg
gagtgctcccagcgttcagctcaggagctgccgcaggttgagaagttcagcctcaccagc
tgtctggtcagtgggggtgaggagatggtgatcactggttccaatgtcttcccagagtcc
aaggttatctttctggagaaaggccctgatggacgaccacaatgggaagttgaagcaaaa
ataattcgtgagaaaacccaaggttcatgcattgtcgtggaaatccctccataccacagt
aagactgtgacttcagctgtacaggtgcagttttatgtctgcaatggaaaacggaaaagg
agccaatcacaacgcttcacctacctttcaggttggtttggaggaatgatggtgaaacag
gaacacagagatgagctggacctcactgccgttcctcccatttccatgcccttggcacat
gctcccagtctggtgcaccctcagctgccttctcctgatcagggccacccatcggacaac
cttatgtccagctctcttcacagcctggccacgggctccggacctggcctgctacctctg
ccgggcccctgttcctccctgagctccccgcctttccagcacctgcctcacctccagggt
cacagtttgcaccacccccctgcagactgccacatgacgttccaccaaggctctgctccc
gctcctccccgtcccacctatcagcctttgcagcacagtccgagtcacaacctgtccttc
aatggccagcccagcctttcttctcagagctacgagaggatgccctttcagcagagcccc
actgcggcgtcacacccaataggcctgggaatagtttactcatccagttgctcctcaccg
tctgccctttcatcctcacccaccaaccccattgttggatcccctcagaaccatcagcct
atgctgtccccctcatccccacacctccacacactcggaggcttccactgctctccgaat
cctagccaggttccgtctcagggaggccaccccctaagtgggcagcactcctcgcagctg
cagagaggtctaggataccacccagtaagccaaaggtcagcttcttgtcccacaccgtcc
actgccccccaacaacggatgatcccctctcctcattctggaccttcttctcctcaagtc
caccctttgccctaccagtctcccccttcatcctcccccacctcagctgggagtcctctg
gggcccctgcagcagcattcaggacagccatctccacaggccacgagtccagtcatgacc
agcctgtcccctgcagctgtggggccactggttcatccactaagtcctcaggggccattt
ccctctgaaggggagaggctgaatattaagcaagaaccggaggagagggagcccaccttc
cgctccatcggcctacaggatatcactctggatgacgtaaatgagatcatcggcagagac
atgtcccagtcccccagcgctcacggccctcagtcggcgcacaaccattcgtag
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