Xiphophorus couchianus (Monterrey platyfish): 114143192
Help
Entry
114143192 CDS
T05908
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04120
Ubiquitin mediated proteolysis
xco04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114143192 (ube4b)
04120 Ubiquitin mediated proteolysis
114143192 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114143192 (ube4b)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114143192 (ube4b)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
U-box type E3
114143192 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
114143192
NCBI-ProteinID:
XP_027870811
LinkDB
All DBs
Position
1:complement(12522318..12537968)
Genome browser
AA seq
1376 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGPTSQPSTPLSTPLTSPQRETPPGPLPGPSGVSPQPVPPAA
SQSLGLNVHSGTPATSPMGTSGVAYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
PASCEKSMSQVDVDSGIENMEVEDSDRREKRNLTEKETSANSDVSEDQALHLICKILRVS
WKEQDRDVIFLPSLAADFHQNPKDVYSDFKDLISQILMEVLMMSSQSNVHNPFASLTATS
QPIAAAKSSDHRLTLVQPSSQGGSPMGPSAGSFGASSLSSLYGCDSPHPMALNAAERTCP
SLSTPAAPAPPSTPQFVVPPSPPATAGTRHTLNPSSTPMPISQRYRPYSVTTPLVASTPL
SPVYRGYSFPGLSPSPAVPSVPPNTPVPATPLSPQSLLLSSPSSGIHPPSPPLPVVPPSP
RLSSRQAAFAARIPSSSPLSFLFFALSDMSQDSSDEESEEEEDFAQVQFGSSLGACGGGM
SCDSASDRFTIEACKETEMLNYLIERFDSVGMEERKAPKMCSQPNVSQLLSNIRSQCISH
VALVLQGALTQPRSPLRQSLLVPYMLCRNLPYGFIQELVRITHQEEEVFKQIFIPILHGL
ALAVKECSFDSDNFKFPLMALAELCEIKFGKTHPVCNLATSLPLWCPKPLSPGCGREIQR
LSYLGAFFSLSVFAEDDTKVGDKYFSGPAITMENTRVVSQSLQHYLESARGDLFKVLHNI
LLNGETRELALNYMAALVNYNVKKAQMQTDDKLVSTDGFMLNFLWVLQQLSMKIKLETVD
PYYIFHPRCRLVVSLEETRLKATMEELKSWMAELHEDPSKFSEPKFPTECFFLTLHTHHL
SILPSCRRYIRRLRAIRELNRTVEELKNSESQWKDSPLASRHREMLKRCKTQLKKLVRAK
ACADVGLLDENQLRRCLQFYSTVIQLILRMVDQAYPNITLPLNPEIPKSFAALPEFYVED
VAEFLLFVVQYSPQVLYEPCVQDVVTFLVVFICSQHYIRNPYLIAKLVEVLFVTNPAVQP
RTQRFSEMMENHPLSIKHLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNI
AHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRE
QQQSRQSQLTQDERVSRSYLALATETVEMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQ
LCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVI
SKMRKAGIKSSIAIEKFKLLSEKVEEIVAKNSQSEMDYSDAPDEFKDPLMDTLMTDPVIL
PSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLESVPELKERIHAWMREKQGARPF
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttgagcgcagacgagattcgcagaaggcggctggcacggctggcaggagga
ccgacatcgcaacccagcacccccctaagcacccctctcacgtccccacagagagagact
ccacctggacccctccctggcccctcaggcgtctcaccccaacctgtaccaccagctgcc
tctcagtcattgggtctcaatgtccacagtggtacccctgccacatcccctatgggcacc
tctggtgtggcatatggtagtcagagcagcgaaggtgtaagctccctctccagctccccc
tccaacagtcttgagacacagtctcagagtttgtctcgatcgcagagcatggacattgac
cctgcctcctgtgaaaagagcatgtcccaggtggatgtggactcagggattgagaacatg
gaggtggaggacagtgatcgcagggagaagagaaacttaactgaaaaggaaacttctgca
aactctgatgtctctgaagatcaggctctgcacttgatttgtaaaatcctccgcgtatcg
tggaaggagcaggacagagatgtcatctttctcccttcactagctgcagattttcaccag
aaccctaaagatgtgtactctgacttcaaagacctcatcagccagatcctgatggaagtc
ttaatgatgtcatcccagtcaaacgtccacaacccgttcgccagcttgaccgccacctct
cagcccattgcggcagcgaaatcctccgaccaccggctgacgctggtgcagccctctagc
caaggcggcagcccgatgggccccagtgctgggtcttttggagccagctctttgtccagt
ttgtatgggtgcgatagtcctcatccaatggcgttgaatgcagcagagaggacttgcccg
tctctctctacccctgctgcacctgctccaccctctacgccacagtttgtagttcccccc
agcccacctgccaccgccggtaccaggcacaccctcaatccgtcatctacccccatgccc
atctctcagagatatcgaccctactctgtcaccactcccttggtggcttctactcccttg
agcccagtttacagaggatatagtttccctggtctttctcccagcccagctgtgccctcc
gttcctccaaacaccccggttccggcaacgcctttaagcccccagtcccttcttttgagc
tcgcccagctcaggcattcatcccccttccccgccccttcccgtggtgcctccttctccc
agactgagttctcgacaggctgcctttgctgccaggatcccatcatctagccccttgtcg
ttcctgttttttgccctttctgacatgtctcaagacagcagtgatgaagagtctgaggag
gaggaggattttgcacaggttcagtttgggtccagtctgggtgcctgtggaggggggatg
tcatgcgattcagccagcgaccgtttcaccattgaagcatgcaaagagacagagatgctg
aactacctcattgagcgttttgacagtgttggcatggaggagaggaaagctcccaagatg
tgcagccaaccaaatgtcagccagcttctcagcaacattcgctctcagtgtatctcccat
gttgcccttgtcctgcagggggctctgactcagcctcggagccccctccgacagtctctg
ctggtaccttacatgctgtgtcggaaccttccgtatggctttattcaggagctggtgcgc
atcacccaccaggaagaggaagtgttcaaacagattttcattcccattctccatgggctc
gctctggcagtgaaagaatgttcctttgacagcgacaactttaaattccccctcatggca
ttagctgagctttgtgaaattaagtttggaaaaactcatcccgtgtgcaacttggcaaca
tcacttcctctgtggtgtcccaaacctctgagccctggttgtggcagagagattcagaga
ctatcctaccttggggcgttctttagcctttcagtatttgcagaggatgataccaaagta
ggggacaagtatttctctggcccagccatcaccatggagaacacccgagttgtcagtcag
tcgttgcagcactatctggagtcagcaaggggtgaccttttcaaagttctccataatatt
ctgctgaatggagaaacgcgcgagttagctctcaactacatggcagctctagtcaactac
aatgtgaagaaagctcagatgcagactgatgacaagctggtttcaacagatggcttcatg
ctcaacttcttatgggtgctgcagcagctgagcatgaagataaaactggagacagtggac
ccatactacattttccatccacggtgtcgccttgttgtcagcctggaggagactcgtctt
aaagccaccatggaggagctaaaaagctggatggctgagctgcatgaggatccctcaaag
ttctcggagcccaagtttcccaccgagtgttttttcttgacacttcacactcatcacttg
tccatcctgccaagctgtcggcgctacatccgcagattgcgcgccatccgtgaactcaac
aggactgtagaggagctgaaaaacagtgagagccaatggaaagactctcccttggccagt
cggcacagagaaatgctgaaacgatgtaaaacccagctcaagaaactggtgcgagccaaa
gcgtgcgctgacgtgggccttctggatgagaaccagctgcgcagatgtctgcagttttac
agcacagttattcagctcatacttcgcatggtggaccaggcctaccccaacattaccctc
cctttgaaccctgagattcccaaaagctttgctgctctgccggagttttatgttgaagac
gtggcagagtttctgctttttgttgtgcagtactctccccaggttctgtatgagccgtgt
gtccaggatgttgtcaccttcttggtagtgttcatctgcagtcagcactacatccggaac
ccctaccttatagccaagttggtggaagtgctgtttgtcaccaaccctgctgtacagcct
cgcactcagagattctctgaaatgatggagaaccacccgttgtccatcaaacacctggtc
cctgctctcatgaagttttacactgacgttgagcacactggtgctaccagcgagttctac
gataagttcactatacggtaccatatcagtactatcttcaagagtctctggcagaacatt
gcccaccatggcaccttcatggaggagttcaactctggcaagcagtttgtgcgctacatc
aacatgctgattaacgacaccaccttcttgttagacgagagccttgagtccctgaagcgc
atccatgaagttcaggaagagatgaagaataaggagcagtgggatcagctgcccagagag
cagcagcagagccgccagtcccagctgactcaggacgagcgagtgtctcgctcttatctg
gcgctggctacagaaacggttgaaatgttccacatcctaaccaagcaggttcagaagccc
ttcctcaggcctgagctcggacctcgtttagctgctatgctgaactttaaccttcagcag
ctctgtgggcccaagtgccgggacctgaaggtggagaacccagagaaatatggctttgag
cccaaaaagctcttggaccagctgacagacatctaccttcaactggattgcgcccgcttt
gctaaagcgattgcagatgaccagcgatcatacagccgggagctttttgaggaggttatt
tccaagatgagaaaggctggtattaagtcctctattgccattgagaaattcaagctgcta
tccgagaaggtggaagaaatagtcgccaagaactcccagtcagagatggactacagcgac
gcacctgatgagttcaaagaccctctgatggacactctgatgactgacccggtgatactg
ccctctgggaacattatggacagatccatcatcttgcgccacctgctgaactcccccact
gatcccttcaacaggcagcccctcacagagagcatgctggagtcagtgcctgagctgaag
gagagaatccacgcctggatgagggagaaacagggcgctcggcctttctaa
DBGET
integrated database retrieval system
