KEGG   Xiphophorus couchianus (Monterrey platyfish): 114143224
Entry
114143224         CDS       T05908                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    114143224
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xco01009]
    114143224
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xco03021]
    114143224
Protein phosphatases and associated proteins [BR:xco01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     114143224
Transcription machinery [BR:xco03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     114143224
    Little elongation complex (LEC)
     114143224
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 114143224
NCBI-ProteinID: XP_027870867
LinkDB
Position
4:complement(28053755..28086110)
AA seq 635 aa
MSLSLTAPETPRPRRDAELTEESCSSRRTGGEPAMASLRQEHRYGLSCGKTTKNSSNITL
YHVKLTDTAIRALEAYQNLKGVLQNETSICFKGNHGYFKIPTPTPESPSALRIFSFYLSS
DSKDQPQASFDCIHQYISSDGCEQLEGQGSIQDKITVCATDDSYQMTRERMSQMEKDSWS
RSAIEIKPGATQPNKSVKYQKRSAPLTAPESSFFKQPPTNRRSCGVPTPTPKSLRECIIH
LLALKPYRKPELLLWLERERASTKDKAELGAVLDEVARVNPKDSSYLLKDDFYKHVQRDW
PGYSEEEKQLISRLLSRKLQPHISNKSRNVQAHLSMPATPEDPSAAKNPAVKRSLPLDSQ
ERLAAKRQKLTDQRLYQSAAKGLANTKGAHDNAAVTFDPSLISVAEPQLIGGIPGDPCGL
TVAHGGFPFDHGLSDGHISEKKEQDANVNKLKTPQGDSGCTQQQLHNSQHRKKKSKKHKE
KERERLKSDKGAEWLQSSPDLKQNPEKLDNPDNTSAAASEEKPDYMLAYSPISSLEQRQR
YQEDFCTEYDEYKDLHSRIAAITHMFVQLGSKIKTLSPGTREYKTMEDQILEKYSKFRKK
FPGYREEKKRCEYLHEKLSYIKQLIIDYDLSKPSS
NT seq 1908 nt   +upstreamnt  +downstreamnt
atgtccctcagtttgacggcgccggagacgccccgcccgcgccgtgacgctgagctgaca
gaggaaagctgctccagccggaggacagggggagagccagcgatggcttcactcaggcag
gagcaccgctacgggctctcctgcgggaaaactaccaaaaacagctccaacattactctg
taccacgtcaagctgacggacacggccattagagcgctggaagcctatcaaaacctcaag
ggagttttgcaaaatgagacatcaatctgttttaaaggaaaccacgggtacttcaagatc
ccaactccaacaccagagtcaccttctgctctgcgcatcttctccttctacctgtccagt
gacagcaaagaccagcctcaagccagctttgactgcatccatcagtacatctcgagcgac
ggctgcgagcagctggagggccaaggcagcatccaggacaagatcaccgtgtgcgccacc
gacgactcctaccagatgacccgtgagaggatgtctcagatggagaaggacagctggagc
cgttcggccatcgagatcaaacccggagccacgcagcctaataaaagcgtcaaataccaa
aagagatccgctcccctgactgctcctgaaagtagcttcttcaagcagccgcccaccaac
cggaggagctgcggcgtgccgacccccaccccgaagtccctgagggaatgcatcatccac
ctgctggccctcaaaccttacaggaaaccagagcttctcctgtggctggagagagagcga
gcctcaacaaaggacaaggccgagctgggagccgtgctcgacgaggtggccagagtgaat
cccaaagacagcagctacctgctgaaggacgacttctacaagcacgtgcagagggactgg
ccgggctacagcgaggaggagaagcagctcatcagcaggctgctgtccaggaaacttcag
ccccacatcagcaataaatcacgcaacgttcaagcacacttgtcaatgcctgcgacccct
gaggacccaagcgcagcgaaaaacccagctgtgaaacgttctttacccctggactcacag
gaaagactggctgcgaagaggcaaaaacttacagaccaaaggttataccagtctgcggca
aaaggactcgcaaacactaaaggagcacatgataatgcagctgtgacctttgaccccagt
ctcatctccgttgctgaacctcagctgatcggtggcattcctggtgacccctgtggccta
actgtggcccacggtggctttcctttcgaccacggcctgtctgacggacatatttctgag
aaaaaagagcaagacgccaatgttaacaagctgaaaacgccgcagggcgactctggctgc
actcagcagcaactccacaacagccagcacagaaagaagaaatctaaaaagcacaaagaa
aaggagcgggagaggttaaaaagtgacaaaggagccgaatggctgcagtcgagtcccgat
ctcaagcagaacccagaaaaacttgacaatcctgacaacacaagtgctgcggcctccgag
gagaagccggattatatgctggcgtacagccccatctcaagtttggagcaacggcagcga
tatcaggaggatttctgcacagagtacgacgagtacaaagaccttcactcccggattgct
gccataactcacatgtttgttcagctgggctccaagatcaaaactctgtctcctggcaca
cgggagtataagactatggaagaccagatactggaaaagtacagcaagtttcggaagaag
tttccaggctaccgggaggaaaagaagcgctgcgagtatcttcatgaaaaactgtcgtac
atcaaacagctcatcatcgactatgacctctccaagccctcttcatag

DBGET integrated database retrieval system