Xiphophorus couchianus (Monterrey platyfish): 114143228
Help
Entry
114143228 CDS
T05908
Symbol
nob1
Name
(RefSeq) RNA-binding protein NOB1 isoform X1
KO
K11883
RNA-binding protein NOB1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114143228 (nob1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xco03009
]
114143228 (nob1)
03051 Proteasome [BR:
xco03051
]
114143228 (nob1)
Ribosome biogenesis [BR:
xco03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
114143228 (nob1)
Proteasome [BR:
xco03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
114143228 (nob1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
WRNPLPNID
Carla_C4
DZR_2
DUF7129
HypA
Zn_ribbon_8
Zn_ribbon_15
DZR
Motif
Other DBs
NCBI-GeneID:
114143228
NCBI-ProteinID:
XP_027870874
LinkDB
All DBs
Position
4:complement(485335..489763)
Genome browser
AA seq
460 aa
AA seq
DB search
MAPTLVEHVVADAGAFLKQAQLQEFGQNIYTLREVLDEIRDRTTRRSLAVLPYQLTFREP
NPEHIRTVTEFSKKTGDYPSLSATDIKVLALTYQLQLEHVGSQNLKAEPDLKVTIQSTQH
HPEAPVHVAGFHLPSRRTVDTTNTGHTRSEPSTQTDLDQFNSFQFWRQPLPSLQGDLLDL
LDPTDPDQQPDIPASSETDEDFSSFRFWRDPVPSVDQDLLALVDVGGASTQVEERRAEPG
LGEDQSDNDDDDDDGWITPSNIRQVKMESSDWTEAADVRVGCLTTDFAMQNVLIQMGLHV
LSVGGLVIRRARSYILRCHACFRTTSNMSKAFCPHCGNQTLKKLAVTVGNDGSIQMHFSK
NPKVMNPRGTRYSLPLPRGGKHAADPHLVEDQRFPQQRLSRKARQKTDVFDPDYLAGASP
FCQNDVYSRAANLQIRDGESGAGRRRANPNAARRKFLKKK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaccctggtggagcatgttgtcgcggacgctggagcgtttttaaagcaagcc
cagctgcaggagtttggccagaacatctacaccctgcgggaggttctggacgagatccgg
gatagaaccacccggaggagtctggccgtcctgccgtaccagctgaccttcagagagccg
aacccggagcacatcagaaccgtgacagagttctccaagaagactggcgactaccccagc
ctgtccgccactgacatcaaggttctggctctgacctaccagctgcagctggagcacgtc
gggtcacagaacctcaaggcggaaccggacctgaaggtgaccatccagagcacacagcac
cacccagaggctccggtccacgttgcgggcttccatcttccctcaaggaggaccgtggac
actacgaataccggacacactcggtcggaaccatccactcagacagacctggaccagttc
aacagcttccagttctggaggcagccattgccgagcctccagggagacctgctggacctg
ctggatccgaccgacccggatcagcagccagacatcccggcatcctcagagacagacgaa
gacttcagcagcttccggttctggagagacccagttcccagcgtggaccaggacctgctg
gccctcgtggatgtgggcggagcctcaacccaggtggaggagaggagggcggagccaggg
ctgggagaggaccaatcagacaacgatgatgatgatgatgatggctggatcactcccagc
aacatcaggcaggtgaagatggagtcgtctgattggacggaggcagctgatgtcagagtg
gggtgcctgaccaccgacttcgccatgcagaacgttctgatccagatgggcctccatgtt
ctgtccgtcggcggcctggtgattcgccgcgcccgcagctacatcctgcggtgccacgcc
tgcttcaggacgaccagcaacatgagcaaagcgttctgccctcactgcggcaaccagacc
ctgaagaagttggcggttaccgttggcaatgacggcagcatccagatgcacttctccaag
aaccccaaggtcatgaacccccgaggaaccaggtactcgctgccgctgcctcgcggcggg
aagcacgccgccgacccccacctggtggaggaccagcgcttcccgcagcagcggctctcc
aggaaggcccggcagaagacggacgtgttcgacccggactacttggccggagcgtcgccg
ttctgccagaacgacgtctacagccgcgccgccaacctgcagatccgtgacggggagagc
ggcgctggccgcaggcgggccaaccccaacgccgcccgcaggaagttcctcaagaagaag
tga
DBGET
integrated database retrieval system
