Xiphophorus couchianus (Monterrey platyfish): 114143237
Help
Entry
114143237 CDS
T05908
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114143237
Cell adhesion molecules [BR:
xco04515
]
Cadherins
Cadherin related
114143237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Cadherin_CELSR2_9th
Ig_Shg
EGF
Cadherin_pro
CADH_Y-type_LIR
hEGF
Fibulin_C
Y_Y_Y
Big_9
Laminin_G_3
He_PIG
Motif
Other DBs
NCBI-GeneID:
114143237
NCBI-ProteinID:
XP_027870895
LinkDB
All DBs
Position
4:31606225..31923205
Genome browser
AA seq
2942 aa
AA seq
DB search
MIWVTFLPFLMPCVAANRTSDLVPFFHGHVFENSSPGSRVNGLSVPLKRLNSRRLCGTAQ
PCSAAAHYKLLGDGSEDFRVFAHHKRGHVLLKTTQTLDREERAEYALSLGLCCGQCAEGE
DASELVASIKVDVLDTNDHQPVFPSANMKLDLDDATALRAAICSLSARDGDSGKNAELIY
FAEPKNGSFYAVPKTGDILLVDSILGLEEPIKFQVFARDRGWPPRTSQGVSVEINPRQWP
AARSATPGPRQQVEAQARKSRSVTEEETPVLISVSEDAGIGSVVVNLNPVRFQSAAFELV
EPELESSPVSVNRDGGDVVIMRRLDRETEPLVEITVRVQDKRGLEWYLVRVELTVTDVND
NIPEWSMVPAPYLAVVSPDATAGSLVYKLIAQDGDEGLNGEVEYFLSDGGDGRFEVDRKS
GQIRTTGLPLQRDREYLLTVVAADGLGSRSAPAIISVVAGARPPQFTNASFVIAIPENTP
EGQPFLVTPAVSFQKKPISYSLLINPSSLFSISADTGEISLTRTIDYESDQHRYLLLVRA
SEGQDSMSSAAEVRVVIVDENDCVPEFLQSIYSKDGVPEMVTTATSLLQVSANDCDSGPN
ADLTYYTLSPDFIISPHGTIFPAGPLDYERANHLYEFVVMAIDKGDVPRTGTTTVRIRMA
NVNDEAPEFSQHIYRTFVSEDAGPNTLVATVLAKDPDGDGITYKITTGNDEGNFVIDSQK
GLIRLRSSPPPRLQGVEYILNVTATDDNASGGPQALASTAQVIVGVDDVNNNKPVFEQCQ
QYRESTSVLENQPAGSFVLQVHAVDADEGSNGRVTYGFMHKDSTVPAFSIHPDTGVIVTA
RKFDRERQREYAVTVTATDQAADPLIGICQLNILILDQNDNSPKFENLRYEYFLREDTMI
GTSFLRVAAHDDDFGSNAAVTYTMSGEQPEYLRVNPLTGWVYVNQPISQRTYITREIVAT
DVGNKSSSVELAVTITNVKNQPPQWEKDTYSVVIPENTVRDTPVVTIKATSPLGDPRVTY
NLEDGMVPETNMPVRFYLTPNREDGSASILVAEPLDYETTRNFILRVRAQNVAAVPLAAF
TTVYVNVTDVNDNVPFFTSSIYEASVTEGAESGTLIFQVSANDLDLGLNGKISYSLLEDR
SGDHKYFRIDSELGFIYSQAVFDRETKSSYLLEVQSVDGWESSRPGKHGQPNSDTAYVRV
FISDVNDNKPLFAQASYEVDVDEDADVGFAILTVSANDGDEGGNAKLRYQITSGNTGGVF
DVEPEVGTIFIAQPLDYEQNKRYKLHVLASDGKWEDYTTVTVNVVNKNDESPVFTVNEYY
GSVTEELDGSPVFVLQVTASDPDKDADQEALRYSLHGQGAESEFIIDEVTGKIYAQRTLD
REERAVWRFVVLATDEGGEGLTGFTDIIINVWDINDNAPVFPCALSCHGDVAENSDIGTS
IMEMTATDLDDSAVGQNAVLSYRIVGILDATNAKLGGVPTISEMFTINPTTGTITVALGG
LDREQVESYLLLVEARDGGGMTGTGTATVQITDVNDHAPRFIDHSCQARISENSEPNAQV
LELAAEDRDTGENAQLTFSVVAGDQEQKFYMVSHKQEQRGVLRLKKRLDYERHSEQKFNL
TLKVEDLDFSSFLHCVVEVEDYNDHTPVFIPHFLSLAPLPEDVSVGTSVARLVASDSDSG
QNREITYSLSEDSDPEGLFTIDQSGLLSVARPLDREKTAQYHLVVIATDHGMPALTGSAT
VLLPLLDVNDNGPEFEAAYSPVVFENVAGPQVVRLNQTSALLWAVDRDSPENGPPFHFTV
PPEYRYSNDFYLQDNLNGTSTLTALRTFDRERQKEFLLPIVMSDSGRPAKTVTSTLTVTI
GDQNDHAHVAGEKQISINSHRGRMPTTVLGKVYAPDPDDWDNKTYVFEGHMPSYFILNKR
TGFLIIKENTLPGTYQFQVRVSDGIWPDAVSTVTVYVRELRDEAIYNSASLRLADITAKE
FMELRGKQRSRYELLVDFLSEMLSVPPGEVNIFSLLDVKERMLDVRFAVSAGPSFLQPEK
MHGYLAAHKQKLQSFLQVSVSQVRVDECPGTECAGSGGCTSVLEVRDAPTVVDCGTMSLV
SVMVESKAVCSCPGREQSHQPCASYPRNPCFNGGLCVDTQHGYRCQCPAQFEGPECQQNK
HSFHGNGYAWFPPMMPCFESHVSLEFITDVADGLLLYSGPLAQLQAWDHEDFMAIELIDG
TPTLKINHGSGTLVLQLPGNINVADRRWHRLDVRSNSKEVRFTLDRCSGAAVMEMEGLGS
WLTTEDHSSCEVTGVTPNTDRHLNTSQVLQLGGVNEDIPYIYPQLQHKHFTGCIRNLIVD
SKLYDLGSPADWQSSSPGCLTTDSSCVNMGFPACGHRGRCHGEWGSFSCQCVAGYTGQQC
EEVAPEYSFDGHSHLHYQLASALPARRTWIQVLVRTRKHSSIIVSLVSRDQSEYLRLEVF
QGLLCTFYNLGDGDYNLTLPSYRLDNGEWHDVSLDRHDNEMTLRLDGGGGKREVTGLQSR
SREIIIDPTAVMLGNSLPSESNKSFQGCIRDLRLNGRYMPLDSQPRDGVSQVSVQGLSVG
CSSDSCKKYHCKAPFTCVDLWRVHECRCPPGHMIRVNGTKKSCVYTLCATRPCHRGTCVA
QSPSKFTCHCPEGYRGRHCETTLAVYREDVGLSFSSLFAICICFMALLVLLLGIFLYTRW
RSYKGLKEGVYHVSAHHDGWEDIRENVLNYDEEGGGEEDQNAYDMAELQKSLQPSPAQSV
QYCRSRALHHPPPAHHLHHHLLHQAPPVPASAPPLDPLSRTSSSTTLPPSAASTSSTATT
TASLRRDVPPARPPAQGQARPSQLARRSLSFSSQDLARYLCEIIRDADQHPDTGPFDSLQ
VFSTEGGGSPAGSLSSFSSAGLDGGSTGEGAGEARREETLGEWGPRFEKLRALYERAEAS
DL
NT seq
8829 nt
NT seq
+upstream
nt +downstream
nt
atgatttgggtcacgtttttacccttcttgatgccttgcgtggccgcgaacaggacgtcg
gaccttgtgccgttctttcacgggcatgtgttcgagaactcgtctcccggctcgcgggtc
aacgggctcagcgtcccgctgaagcgactcaactcgcgccggctgtgcggcaccgcgcag
ccctgctccgcagcagcgcactataaacttctgggagacgggagcgaggacttccgcgtc
tttgcgcaccacaaacgagggcatgtccttctgaaaacgacccagactctggaccgagag
gagcgggctgagtacgccctgagtctgggtctgtgctgcggacagtgcgcggaaggggag
gacgcgtccgaactcgtggcgtccatcaaggtggacgtcctggacaccaacgaccaccag
cccgttttccccagcgccaacatgaagctggatctggacgatgccactgcgctgcgcgcg
gcgatctgctcactgagcgcgcgggacggcgacagcggcaagaacgcggagctcatctac
ttcgccgagcccaaaaacggaagtttctacgcggtgcccaaaacgggggatatcctcctg
gtcgactccatcctcggtctggaagagcccatcaagtttcaagtgtttgcgcgggaccgc
ggctggccaccccgcacgagtcaaggtgtctccgtggaaataaacccgcggcaatggccc
gccgcgcgctccgcgacccccggaccacggcagcaagttgaagcgcaagcgcggaagtcc
cgatcggtcacggaggaggaaacgccggttctcatcagcgtgtccgaggacgcggggatc
ggttctgtcgtggtgaacctgaacccggtgaggttccagtcggccgccttcgagctggtg
gagccggagctggagagctccccggtcagcgtgaaccgggacggcggggatgtagtcatc
atgcggaggctggaccgggagaccgaacctctggtggagatcaccgtcagggtgcaggac
aagagaggtttggagtggtacctggttagagtggagttgactgtgactgatgtaaatgac
aacatcccggaatggagcatggttcctgccccctaccttgcagtggtttccccagatgcg
actgcgggatcactggtttacaaactcattgctcaggatggagacgaaggtcttaatggt
gaagtggagtacttcctatctgatggtggcgacggtcgatttgaagtggacaggaagagt
ggccagatacggacgacggggcttcctctgcagcgtgacagagagtacctgctgacggtg
gtggcagccgacgggctgggcagccgcagtgcccctgccatcatatccgtggtggccgga
gctcggccaccgcagtttactaatgcctccttcgtcatcgctataccggaaaacacgccg
gaaggacagccgtttctggtgacacctgctgtgtccttccaaaagaaaccaatcagctac
agcctcctcatcaatcccagcagtctgttctccatctcggcagacacgggcgaaatcagc
ctgacccgcaccatcgattacgagagtgaccaacatcgttacttgcttctggtgcgggcc
agcgagggccaggacagcatgagcagtgcagcggaggtgcgagttgtcattgttgatgag
aacgactgcgttccagaattcctgcagtcgatttacagcaaggacggcgttccggagatg
gttacaacggcaacctccctgttgcaagtgtctgccaacgactgcgactccggaccgaat
gccgacttgacctattacaccctgagtccagattttatcatttctcctcacgggaccatc
ttcccagcgggacctctggactacgagagagccaatcacctgtacgagtttgtcgtcatg
gcaatcgacaagggagacgtccctcggacgggaacgacaacggtacgaattaggatggcc
aacgtgaacgacgaggcacccgagttttcccaacatatataccggacgtttgtgtcagaa
gatgcggggcccaacacacttgttgccacggtgctggcaaaggaccctgatggggatggg
atcacgtacaaaatcaccacaggaaacgatgagggcaattttgtcattgacagccaaaaa
ggtttgatccggctgcgctccagcccgccgcctcgcctgcagggcgtggagtacatcctc
aacgtcacggccacagacgacaacgcctcgggcgggccgcaggcgctggcctccacggcg
caggtcatagtgggagtggacgacgtgaacaacaacaagcccgtctttgaacagtgtcag
cagtacagagagagcacatcggttttggagaaccagccggcggggtcatttgttctgcag
gttcatgctgtggatgcagacgaaggctctaatggcagggtcacatatggtttcatgcac
aaagactctacagttcctgcattcagtatccaccctgatactggcgtgatcgtgactgcc
aggaaatttgatcgtgagcgtcagcgggagtatgcggtgacagtgactgccactgaccag
gcagccgaccctctgatcggcatctgtcagctcaacattctcatcctggaccagaacgac
aacagcccgaagtttgagaacctccgatatgagtactttcttcgtgaggatacgatgatc
ggaactagtttcctgcgggtggcggcccatgatgatgactttggcagcaatgcagccgtc
acctacaccatgtctggtgagcagccggagtacctcagggtcaacccactgacaggctgg
gtttacgtcaaccagcccatctcccagaggacatacatcaccagggagattgtagcaaca
gacgtaggaaacaagagcagctcggtggaactggctgtcaccatcaccaatgtgaagaac
cagcctccacagtgggaaaaggacacttacagtgtggtgataccggaaaacacagttcgg
gacacgcccgtcgtgaccatcaaagccacatcccctcttggagatccgagggtaacgtac
aacttggaggatggaatggtcccagagaccaacatgccggttcgcttctacttgactccc
aatcgagaagacggttcagcctccatcctggtggcggagcccctggactatgagaccacc
aggaactttattctgcgggttcgcgctcagaatgtggcagctgtaccattagctgccttc
accacagtctatgtcaatgtcacggatgttaatgacaacgttccattcttcacttcctcc
atctatgaggcctcagtcactgaaggagcagaatcaggaactttgattttccaggtatca
gccaatgatctggacctgggccttaatggcaagatttcctactcgttgctggaggaccgc
agtggggaccacaagtatttccgcatcgactcggagctgggcttcatctactctcaggct
gtgtttgatagagagaccaaaagctcgtatctgttggaggttcagtctgtggatggctgg
gagtcttcgcgaccaggaaagcatggacaacccaactctgacacagcatatgttcgcgtt
ttcatcagcgacgtgaacgataacaagcccctgtttgcacaggcgtcttatgaagttgat
gtggatgaggacgctgacgtgggctttgctattctcacagttagtgccaatgatggggac
gaaggtgggaatgcgaagctgcgttaccagatcacatccggaaacacaggaggcgtgttt
gacgtggagccagaggtgggaaccatcttcatcgctcagcctctggactatgaacagaac
aaaagatacaagctgcatgtcctggcttcggacgggaagtgggaggactacacgacggtg
acggtgaacgtggtgaacaagaacgacgagtcgcctgtgttcacagtgaacgagtactac
ggcagcgtgaccgaggagctggacggttcgcctgtctttgtcctgcaggtaacagcgtct
gacccagataaggatgccgaccaggaggccctgcggtactccctccatggccagggtgct
gagagcgaattcataatcgatgaggtcactggcaagatctacgcccagaggacgctggac
cgcgaggaacgcgccgtctggcgcttcgtcgtcctggcaacagatgagggcggcgaaggc
ctgacgggctttacggacattatcatcaacgtgtgggacatcaacgacaacgctcccgta
ttcccctgtgccctcagttgccacggagatgtagcagagaactctgatatcgggacgtcc
atcatggagatgactgccactgacctggatgattcggcggtgggacagaacgccgtgctc
tcctacaggatcgtgggcatcttagacgccacaaatgccaaactgggcggagtgcccacc
atctcggaaatgttcaccatcaaccccaccacgggaaccatcactgtggccctgggcggt
ctggacagggagcaggtggagtcctacctcctcctcgtcgaggccagagacggaggaggc
atgacgggaactggaaccgcaaccgtccagattaccgacgtcaacgaccacgctccgagg
ttcatcgatcattcctgtcaggcaaggatctctgaaaactcagagcccaacgcacaggtt
ctggagctggctgcagaggacagagacactggagaaaacgctcagctgaccttcagcgtt
gtggccggagatcaagagcagaagttctacatggtcagtcacaagcaggagcagcgtggc
gtcctgaggctgaagaagcgcttggactacgaacgacacagtgaacagaagttcaacctc
acgctgaaggtggaggatctggacttctccagctttctgcactgcgtggtcgaggtggag
gactacaatgatcacactcctgtcttcattccacacttcctgtcccttgcgccgctacca
gaggacgtcagcgtgggaaccagcgtggcccgtctggtggccagtgactcggactcgggc
cagaaccgcgaaatcacctacagcctgtcggaagactcagaccctgagggcctgttcacc
atcgaccagtccggcctactctcggtggcccggccgctggaccgagagaaaacagctcag
tatcacttggttgtcatagcaacagatcacgggatgcctgctttgacagggagcgccaca
gttctgctgcccctgttggatgttaacgataacggaccagagtttgaggctgcctactct
cctgtcgtctttgagaatgtggctggtccacaggtagtgaggttgaaccaaacctcggcc
ctcctctgggctgtggaccgggactctcccgagaacgggccgccctttcacttcaccgtc
ccaccggagtatcgctacagcaacgacttctaccttcaggacaacctgaacggcacgtcc
actctgacggccctcaggacgttcgaccgcgagcgccagaaggagttcctcctgcccatc
gtcatgagcgacagtggtcgcccggccaaaacggtgaccagcaccctgactgtgaccatt
ggtgaccagaatgatcacgctcacgtggcgggagagaagcagatatccatcaacagccac
agaggccgcatgccaacaacagttcttggaaaggtctatgctcctgaccctgatgactgg
gacaataagacctacgtctttgagggacacatgccaagttacttcatcctgaacaagcgt
acagggttccttatcatcaaggagaacaccctacccggcacctaccagttccaggtccgt
gtgtctgatggaatttggcccgacgccgtctccacagtaaccgtatacgtaagggagctg
cgagacgaagccatctacaactctgcgtcccttcgcctcgcagacatcactgccaaggag
ttcatggagctccgagggaagcagcgtagccgctacgagctgctggtggacttcctgtcg
gagatgctctccgtcccaccaggggaagttaacatcttcagcctcctggacgtgaaggag
cgaatgctggacgtccgctttgctgtgagcgccggcccctccttcctgcagccggagaag
atgcatggctacctagccgcccacaaacaaaagctccagtccttcctgcaggtcagcgtg
tcccaggtccgggtggacgagtgtcccggtacggagtgcgccggctccggcggctgcacc
agcgtgctggaggtgcgggacgcgcccacagtggtggactgcggcaccatgagcctggtt
tccgtcatggtagagtccaaggccgtgtgctcctgcccgggacgggagcagtcccatcag
ccctgcgcctcgtatcccagaaacccctgcttcaacggagggctgtgcgtggacacgcag
cacggctacaggtgccagtgccctgctcagttcgagggacctgaatgccagcagaacaag
cacagtttccatggcaatggctatgcttggtttcctcctatgatgccttgttttgagagc
catgtgtcgctggagtttatcacagacgtggctgatggactgctgctgtacagcggccca
ctggcacagctgcaagcctgggaccacgaggacttcatggccatagagctaatagacggg
accccaaccttgaaaatcaaccatggctctggcacgcttgtgctacagctgccagggaac
atcaatgtggcagacaggcgctggcatcggctggacgtccgtagcaacagcaaggaagta
cgtttcaccctggaccgatgttcaggagcggcagtgatggaaatggagggtctgggcagc
tggttgaccactgaggaccactcctcctgtgaagtgacgggtgttacacccaacactgac
agacacctaaacacgagtcaagttctccagctcggaggtgtgaatgaggacattccctac
atctaccctcagcttcagcacaaacacttcaccggctgcatccgcaacctcattgtggac
agcaagctgtatgatctgggctccccggccgactggcagtccagctccccaggctgcctg
accactgatagcagctgtgtcaacatgggctttccagcctgcggccatcgcggccgctgt
catggggagtggggctccttcagctgccagtgtgtggccggatacacgggacagcagtgt
gaagaagtggccccggagtattccttcgacggccacagccatctgcactaccagctggcg
tccgcgctcccggccagaagaacatggatccaagtcctggttcgaacccggaaacacagc
agcatcatcgtcagcctggtgtccagagaccagagtgaatacctgcgactggaggtattt
cagggccttctttgcactttctacaacctcggcgacggagactacaacctgaccctaccc
agctatcgccttgacaacggtgagtggcatgacgtctccttggacagacacgacaacgag
atgacgctgcggctggatggcggcggagggaagcgggaggtgacgggattgcagagcaga
agccgggaaatcatcatcgacccgaccgccgtgatgctggggaactccctcccctcggaa
agcaacaagagctttcaaggctgcatcagggatctacgcctcaacggccgttacatgcca
ctggacagccagccacgggacggggtttcccaggtcagcgtgcaagggctctccgtcgga
tgttcatcagactcctgcaaaaagtaccactgtaaagccccgtttacctgcgtggacttg
tggagagtgcacgaatgcaggtgtcctcctggtcacatgatccgtgtgaacggcaccaaa
aagtcctgtgtgtacacgctatgtgctacacggccttgtcaccggggaacctgcgtggcc
cagtcaccctctaaattcacctgccactgtccggagggctacagggggcgccactgtgag
acgacattggctgtttatagggaggacgtgggcctgagcttcagctcgctctttgccatc
tgtatctgcttcatggcgttgctagtgctgctgctgggcattttcctctacacccgctgg
cggagctacaaaggtctgaaggagggcgtgtaccacgtgtcggcgcaccacgacggctgg
gaggacatccgggagaacgtgctcaactacgacgaggagggaggcggcgaggaggaccag
aacgcctacgacatggcggagctgcagaagtcccttcagccaagccccgcccagtcggtc
cagtactgccgctccagagcgctgcaccacccgccgcctgcccaccacctgcaccaccac
ctgctccaccaggctccgcccgtcccggcctccgccccgccactggaccccctcagccgg
acgtccagctccaccaccctgcctccctcggccgcctccacgtcctccacggccaccacc
accgccagcctccggagggacgtgccccccgcccggccccccgcccagggccaggcgcgc
ccctcccagctggcgcggcgctccctctccttctccagccaggacctggcccgctacctg
tgtgagatcatccgtgacgccgaccagcacccagacacggggcccttcgactccctgcag
gtgttctccaccgagggcggggggtcgcccgccggctccctcagctccttcagttcggcg
gggctggacggggggagcacaggggaaggggctggggaggctcggcgggaggagacgctg
ggggagtggggccctcgctttgagaaactgagagctctgtacgagcgagccgaggccagc
gacctctga
DBGET
integrated database retrieval system
