Xiphophorus couchianus (Monterrey platyfish): 114143269
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Entry
114143269 CDS
T05908
Name
(RefSeq) trichohyalin-like isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114143269
Membrane trafficking [BR:
xco04131
]
Autophagy
Other autophagy associated proteins
Others
114143269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
114143269
NCBI-ProteinID:
XP_027870946
LinkDB
All DBs
Position
1:23928981..23952269
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AA seq
802 aa
AA seq
DB search
MAELEIDQSNLPRVQEVCQNFAVLEDGVLAHSLQEQEIEQYYTTNIQKNQLVQNDIRVAR
RLQQEEEQQRAQQSALLKQVSRQMEEQDFEYARVIQEELQRRAEEVHRREQDDEEIAKQL
QEEEEQQVRRRSQDQEDFHEGSTSDPALPSSHHHTFSSPHRGQQQYSPVTSRWQHSTTHR
GSVLTGPQTSSPRRAASQSSTTSWSNQGHVDTSRQRRPELREPVNEDSEDSDTVFTEQLS
LWARRLYDRANTAPRQQQTSLRPPQERNYRSLCTRSSFAKDLTGRKEESENVEEDYYEND
NVQCRIYRNVDYDSDEHEGRTQEADRRPAEACERRCRRSESVSVHNRSRHRNRDLARTWS
CKENPDKHVRFQDDPREPIMQQNDSLKVWEMLGHILQDRGVPVKVGGSGAPLQIRPQSRD
SQVLYGSEVSYGDSQLHQRAFQRATATRHSFHGDIRQRRRLSRGESFGRDHRADQDRRNY
NREVCDRNSGEPHIFDRGTSWSEHKYVNIENNRERKANHTRVKRVTSERRHWHKITEETL
SSDEEQEAERRAERPRRRALHRSQSFSSSRGSTRHRSRHIAAGAYLQPEPSEAGLDPGDL
NQVLQDEELARKLQEEEDKQLRRTSLRNSYPEGDFRVAQVAQDEEIARFMQKQEIKAKRR
SRELEGPGSWHEHRAMINHHDRRAARERQVYRERLDSEGLPSPTEDCSPDNQPPSPVHAI
PKAQQMRNIAEELDPTFQGRVHVPESFQAGQSGQTSEALPTAQSGLQDLTLEEPTFIPPT
KRQADKSGRSKPKEKREGCKQQ
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggcagagctggagatcgaccagtccaaccttccacgtgtccaagaagtttgccagaac
tttgctgtgcttgaggatggagtgttggcacacagcctgcaagagcaggagattgagcaa
tactacaccaccaatatccagaagaaccaactggtgcaaaatgacatccgggtagcccgg
aggctgcagcaagaggaggagcagcagcgggctcagcagagcgccctgctcaaacaggtt
tccagacaaatggaggagcaggactttgaatacgcccgggtgattcaagaagagctccag
cgacgcgctgaggaggtacacaggagggagcaggacgatgaggaaatagctaaacagctg
caggaagaggaggagcagcaggtcaggaggaggagtcaagaccaggaggattttcatgaa
ggtagcaccagtgatcctgcgctgccgtcctctcaccaccacacattcagcagccctcac
cgaggacagcagcagtactcgcctgtcaccagcaggtggcagcattctaccactcatcgt
ggttcagtgttaactgggcctcagactagttctcccaggagagcagcatctcagagcagc
acaacttcatggtcaaatcaagggcatgtagataccagcaggcaaagaaggcctgagctc
agagagcctgtgaatgaggattcagaagactcggacactgtttttactgaacagctctct
ctttgggcccggcgactgtatgacagagcaaatactgcacctcgtcaacaacagacttct
ttaagacccccacaagagaggaattacagaagtctgtgcactcgaagcagcttcgcaaag
gacttaacaggcagaaaggaggagagcgaaaacgttgaggaagactattacgaaaatgat
aacgtgcaatgcaggatatataggaatgtggattatgacagcgatgaacatgaaggcagg
actcaggaagcagatagaaggccagccgaggcctgcgaaaggcgatgtcgccgcagcgaa
tcggtgagcgtacacaaccgaagcagacacagaaacagagacctggcaagaacctggagc
tgcaaggagaaccccgataaacacgtccgctttcaggatgatccgagagaaccgattatg
cagcagaatgacagcctgaaggtgtgggagatgctcggccacattctgcaggacagaggt
gtgcctgtgaaggttggtggcagtggggcgccgctgcagataaggcctcaaagcagagac
agccaggtgctttatgggagtgaggtctcctatggtgactcccaactacatcagagagcc
ttccaacgagccactgccactaggcacagtttccatggagatatcaggcagaggaggaga
ttgtcacgcggagaaagctttgggagagatcacagagcagaccaagacaggcgtaattat
aacagagaggtttgtgaccgcaatagtggagagcctcatatctttgacagaggcacaagt
tggagcgaacacaaatacgtaaacattgagaataacagagagagaaaagcgaatcatacc
agagtaaagagggtgacgagcgaacgcaggcattggcacaagatcacagaagaaacattg
agttcagatgaggagcaggaggcggagagaagagcagagcgtccaaggcgacgagcgcta
catcgtagccaaagcttcagcagcagcaggggttcgaccagacacaggtcgaggcacata
gcagcaggggcttatctgcaaccagagccaagcgaggcaggcctggatccgggagacttg
aatcaggtcctacaagatgaagaactggcccgcaagcttcaggaggaggaagataaacag
ctaaggaggacatctttacgcaattcctatccagagggggacttcagggtagctcaggtt
gcacaagatgaggaaattgcacgttttatgcagaagcaggaaattaaggcaaagcgaaga
tctcgtgaactggaagggccaggatcttggcatgaacacagagcgatgatcaatcaccac
gacaggcgagccgcaagagaaagacaggtgtatcgagaaagactcgactcggagggtctc
ccctccccgactgaagactgctcaccagacaaccagccacccagccctgttcacgccata
ccaaaagcccagcagatgagaaacatagcagaggagctggacccgaccttccaggggcga
gtgcacgtcccagagagcttccaagcagggcaaagtggtcaaaccagtgaggcgctcccc
acagcccaatccggcttacaggacctaaccctggaggagccgacgttcataccaccgaca
aaacgacaggcggataaatctggacggagtaaacccaaagagaaaagggaaggatgcaag
caacaataa
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