Xiphophorus couchianus (Monterrey platyfish): 114143282
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Entry
114143282 CDS
T05908
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114143282 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114143282 (cstf3)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
114143282 (cstf3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_19
Motif
Other DBs
NCBI-GeneID:
114143282
NCBI-ProteinID:
XP_027870964
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All DBs
Position
4:complement(14426327..14437395)
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AA seq
716 aa
AA seq
DB search
MSTEGTAEQTAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTHERLVS
QFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLAYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFAFADYEESRMKYEKV
HSIYNKLLAIEDIDPTLVYIQYMKFARRAEGIKSGRAIFKKAREDLRTRHHVYVSAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPE
KSGEIWARFLAFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYPCSTS
ELKALGYKDVSRAKLAAMLPEAVVAPSVPTLKDDPDRKPEYPKPDTNQMIPYQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPTCFTGPFVQVDELMETFRRCTLPESVDAAVELIT
GRQPEAAGEGNGPMENHATAKSLKRPNADSDEEDDKGAIAPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggagggaaccgccgagcagacagcagctgagtatattcctgagaaggtgaag
aaagcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcattctgatt
cgagaagcacagaatcaacccatagataaagcaaggaagacccatgagcgacttgtctca
cagttcccgagttctggcagattctggaaactgttcattgaagccgagataaaggctaaa
aactatgacaaggtagagaagctgtttcagagatgcctgatgaaagtgttgcacattgac
ttgtggaaatgctaccttgcatatgttcgagagaccaaagggaagcttcccagctacaaa
gagaagatggcccaggcgtatgatttcgcccttgataaaattgggatggaaattatgtcc
tatcagatttgggtcgactacataaatttcctaaaaggagttgaggcagtgggctcgtac
gcagaaaatcaaagaatcactgcggttcggagagtctaccaaagaggttgcgtgaaccca
atgataaacattgaacagctctggagagattatagcaaatatgaagagggtatcaatgtg
catttggctaaaaagatgattgaagatcgcagcagggattacatgaatgcaaggagagtg
gcaaaggagtatgagacagtaatgaaagggcttgacagaaacgcaccttcagttccacca
cagaactcccctcaggaggcccagcaagtggaaatgtggaaaaagtacattcagtgggaa
aaaagcaacccactccgcacagaagaccagaccctcatcacaaagagagtgatgtttgcc
tatgagcagtgcctgctggttctgggccaccatcccgacatttggtacgaggcagctcag
tacctggagcagtccagcaagctgctggcagagaaaggagacatgaataattcaaagctg
ttcagcgacgaggcagctaacatctatgaacgtgccattgggactctcctcaaaaagaac
atgctcctctactttgcgtttgctgattacgaagaaagtcgcatgaagtacgagaaagtg
cacagcatctacaacaaactgcttgcgatcgaggacatcgaccccacgctggtctacatc
cagtacatgaagttcgccaggagggcggagggaatcaaatcaggtcgcgccatcttcaaa
aaggctcgagaggacctgcgcacgcgtcaccacgtctacgtgtctgcagctctgatggaa
tactactgcagcaaagataaatcagtggcctttaagatttttgagctgggtttgaagaag
tatggagacattccagagtacatacttgcctacattgattacctctcccaccttaatgag
gataacaacactagggttttgttcgaacgggtcctcacctctggaagcctatccccagag
aaatcaggtgagatctgggctcggttcttggcgttcgagagcaacatcggagacctggcc
agtattctgaaagtagagcgccgacgtttcacagccttcaaagacgagtatgaggggaaa
gaaacggctttgcttgtagatagatacaagttcatggacctttatccctgctctaccagt
gaactcaaagcccttggttacaaggatgtgtctcgtgccaaactggcagcaatgctccct
gaagctgtggtggctccctctgtgcctacactaaaggacgatcctgatcgtaaaccagag
tatcccaaaccagacaccaatcagatgatcccgtatcagccacgtcacctcgctcctcca
ggtctacacccggtccctggtggagttttcccagtccctccagctgctgttgtcctaatg
aagctgctccctccacctacgtgtttcactggtccctttgttcaagtggatgagctcatg
gaaacttttaggagatgtacacttcctgagagtgttgatgctgctgtggagctcatcacc
ggcagacagcctgaggcggcaggggagggcaacggccccatggagaaccacgctaccgct
aagtccctcaagaggccaaacgccgactccgatgaggaggacgacaagggagccatagct
ccacccattcacgacatctaccgcgcgcgccagcagaagaggattcgataa
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