Xiphophorus couchianus (Monterrey platyfish): 114143287
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Entry
114143287 CDS
T05908
Symbol
cdh15
Name
(RefSeq) cadherin-15
KO
K06809
cadherin 15, M-cadherin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
114143287 (cdh15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114143287 (cdh15)
Cell adhesion molecules [BR:
xco04515
]
Cadherins
Major cadherins
114143287 (cdh15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Big_13
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
114143287
NCBI-ProteinID:
XP_027870972
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Position
4:complement(20558449..20577277)
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AA seq
802 aa
AA seq
DB search
MALWRLMSCLLSLLVCQVCSSAEYHHNEAEQDLNALYLWRNKGKGMIRVKRDWIIPPIRV
SENSRVVPEDLVQIKSDKIFSGEVIYKLEGPGVDQEPKNLFEIDDKTGMIRSKRPLDREQ
HSSFTLKAFALSPSGERLENPTTIEIVVLDQNDNKPVFTQKQFFGSVHEFSVPGTLVMSV
SATDADDPMTENAALGFSIVGQESIPPNAVNKTMFGINNQTGAIYTRDVGLDREVVKEFK
LKLRVADMGGDGLISDAVAIITVSDINNHAPQFHPTSYNIKALENVYNVEIGRVSVIDRD
DPGTGNWEVKYTVSHDPFGNFAIQTDPVTNQGILTVVKPLDYEVKREHNLILTVENINSL
SIKVPNLRLSSATVSITVVNENEAPYFKENPILIQVPENEKPGKLLKSNIASDPDHSELR
FEISKDPEGWLDINRETGNIFLRRSFNIRSPHVENNIYSAAIKVTDAGGVSASAAVSIIL
EETNDFPPQLLPLSRFLCTGDSRRTPGFLLTAVDEDRSPHASPFIFVIPDSLLLNWTVTK
VNDTHAILRPTEELEAGEYTVTVWVTDSGSPAQSALSQVNVTACLCDSYGDCRFEAGAFL
GSRVGISFIALIIIIASGVLLLVLLFLAVAINACGRRHHIKKGSGLLVGESEDDIRDNIL
NYDEQGGGEEDENAFNIDLLWNPRDAPPTPWSFYPGSGLPRGKQPLRKDAPHNLPSPTYP
RRPPADPTDIEDYINEGLEAADNDPNVPPYDTALIYDFEGEGSVAGSLSSIASGSSDGDQ
DYDYLNDWGPRFQKLANMYDPR
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtggaggttgatgagctgcttgctgagtctgctggtctgtcaggtctgtagc
tctgctgagtatcaccacaatgaggcagagcaggaccttaatgctctttacctctggaga
aataaaggaaaggggatgataagagtcaagagagactggatcatcccccccatcagagtt
tcagagaacagcagagttgttcctgaagacctggtccagatcaaatcagacaaaatcttc
tcaggagaggtgatctacaagctagagggaccaggggtggaccaggagcccaaaaacctg
tttgagattgatgataaaacaggaatgatcaggagcaagaggccgctggacagagagcag
cacagcagcttcacgctgaaggcatttgccctgtcccccagtggagaaagactggagaac
cccacaaccattgagatagtggtgctagatcagaacgacaacaagcccgttttcacccaa
aagcagttttttggatcagtccatgagttctctgtcccaggaacattggtgatgtcagtc
tcagcgacagatgcagatgacccaatgacagaaaacgcagctctgggcttctccatcgtt
ggtcaggagagcattcctcccaatgctgtaaacaagactatgtttggtattaacaaccaa
acaggagctatttacaccagagatgtgggcctagaccgagaggtggtgaaggagttcaag
ttaaagctgcgggttgctgatatggggggcgacggattaatcagtgatgctgtagccatc
atcactgtatcggatatcaacaaccatgcaccacagttccaccctacctcatacaacatt
aaggcactggagaacgtttacaacgttgagattggccgagtgagcgtgatagacagagac
gaccctggaacaggaaactgggaggtcaaatacacagtatctcatgacccatttggaaac
tttgccatccagacagatccagtcaccaaccagggaatcctgactgtggtgaagccccta
gattatgaagtcaaaagggagcacaacttgattctgactgtggaaaatatcaattctctg
agcatcaaggtgcccaacttacgtctgagttctgccactgtgtcaatcacagttgtcaac
gagaatgaggctccgtattttaaggagaaccccatactgatccaggtccccgagaacgag
aaacccggaaagctgctgaaaagcaacattgcctcagacccggaccattctgaactgagg
tttgaaattagcaaagaccctgaggggtggctggacatcaaccgagaaacaggaaacatt
ttcctcagaagatccttcaacatcagatccccacatgtcgaaaacaacatttacagtgca
gccatcaaggttacagatgctggtggtgtttcagcctctgcagcggtgagcataatcctg
gaggaaaccaatgacttccctccccagctcctccctttgagccgtttcttatgcacgggt
gacagcagaaggactcctggttttttactaactgctgtggatgaagatcgttctccacat
gcctctcccttcatttttgtcattcctgactctttgttgttaaactggactgtcactaaa
gtcaacgatactcatgcaatcctccggcccactgaagagctggaagctggagagtataca
gtcactgtgtgggtcacagactctggcagcccagctcagagtgctttaagtcaagtcaat
gtcaccgcatgtctctgtgactcctatggtgactgtagatttgaggcaggggctttctta
ggttccagagtgggaatcagcttcatcgctctcattattatcattgcatctggtgttctt
ctacttgtgctgctattcctggctgtggctataaatgcctgtgggagacgtcatcacata
aagaaaggatcaggtctgcttgtaggggaatcggaggacgacatacgcgacaacatcctc
aactacgatgagcagggaggcggtgaggaggatgaaaacgccttcaacattgacctgctg
tggaacccccgtgatgcgcctcccaccccgtggtccttctacccggggtctggccttcct
cgaggcaagcagcccctcaggaaggacgccccacacaacctgccctcccccacttacccc
cggcggcctcccgcagatcccactgacatcgaggactacatcaatgaaggcttggaggct
gctgacaacgatcccaacgtgcctccatacgacacagccctgatctacgacttcgaggga
gaaggctcagtggctggcagcctcagctccatcgcttcgggcagctcagacggagatcag
gactacgattacctcaacgactggggaccacgctttcagaaactagccaatatgtacgac
ccacgttaa
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