Xiphophorus couchianus (Monterrey platyfish): 114143305
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Entry
114143305 CDS
T05908
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1-like
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114143305
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114143305
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
PH_11
MYO6_lever
IQ
PH_13
EGF1_RECK
Motif
Other DBs
NCBI-GeneID:
114143305
NCBI-ProteinID:
XP_027870993
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Position
4:10190041..10218022
Genome browser
AA seq
1257 aa
AA seq
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MQKGMRLNDGHITYLALLAKKDGTRRGFLSKKSSDNTKWHSKWFALLQNMMFYFESESSS
RPSGLYLLEGCVCDRAPSPKPSLSAKECLEKQFYFTVTFSHENQKPLELRTEDVKDCDEW
VAAITQASYRNLATEHETLMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEIERLKSEISG
ILRDNEKIQSNPEVPPSEDDTEIKKIKKVQSFLRGWICRRKWKTIIQDYIRSPHAESMRK
RNQVVFSMLEAEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFLH
QIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKLL
KQYESKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERNSLDYAKSKLEELS
RIMHDEVSETENIRKNLAIERMIVEGCEVLLDTSQTFVRQGSLIQVPMSEKGKITRGRLG
SLSLKKEGERQCFLFSKHLIICTRGSGGKLHITKNGVVSLIDSTLMEEPEGTDDESKGER
SGQDAEHLDFKVMVEPKEGQPYTVILVASSRQEKSAWTSDISQCIDNIRCNGLMMNAFEE
NSKVSVPQMIKSDTSLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLIDLRFLSIDFL
NTFLHSYRVFTSADIVLDKLITIYKKPISAIPARSLELFFASSQNNKLLYGEPPTSPRAS
RKFSSPPPLSITKNSSPNRRRKLSLNIPIITGGKALDLAALNCSPNGYASMHTTMSPFSK
TTLDINKLYVSSTMASKIPDEGESKSEGKAEESAPGKQDRSVREECDEEQSQSDEAESEM
SPPKSPSTPKNVKSKNSEFSLFSFNNGMVVSSCRELENNRSALSAASAFAIATAGANEGT
PTKEKYRRMSLASTGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSQDFELNTELKM
RVIGFLEEVMHDPELLTQERKAAANIIRTLTQEDPGDSQASIEEITQMAMEESKTEPFEN
HSALEIAEQLTMLDHLVFKVIPYEEFFGQGWMKNDKNERTPYIMKTTKHFNDISNRIASE
ILHWDDVNMRVAVIEKWVAVADICRCLHNYNAVLEITSSLNRSSIFRLKRTWLKVSKQTK
TVIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDNLVNFS
KMRMISHIIREIRQFQQTAYKIDFQPKVAKYLLDNSTVMDEESLYEASLRIEPKTSS
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagggatgagactcaatgatggccacatcacctatttggcccttttggcgaaa
aaggacgggacgaggcgcggcttcttgagtaagaaaagctcagacaacacaaaatggcac
tcgaaatggttcgccctgttgcagaatatgatgttttatttcgagagcgagtccagctca
cgtccctccggactgtacctgttggagggatgcgtctgtgaccgggctccgtcaccgaaa
ccgtctctgtcagcgaaggaatgcttagagaagcagttctacttcaccgtcactttcagt
catgagaaccagaagcctttggagttgcgcacagaagatgtcaaagactgcgacgaatgg
gtggctgccatcacacaagccagttacagaaatctggccacagagcatgagaccctcatg
cagaagtatcttcatctgctccagatagtggaaacagagaaaactgtagccaagcaactt
cgacaacagatagaggacggggaaatagagatagaaaggctaaaatctgagatttctggg
attctgagggataatgagaagatccagtcaaatccagaagtgccccccagcgaggatgac
acagagatcaagaagatcaagaaggtgcaaagtttcttgcgaggttggatttgccgcagg
aagtggaaaaccatcatccaggactacatccggtccccccacgccgaaagcatgcggaag
agaaaccaggtggtattcagcatgctggaggcagaagccgagtacgtccagcagctccac
atcttggtcaacaacttcctgcggccgcttcgcatggcagccagctccaagaaacccccc
atcacccatgacgatgtcagcagcatcttcctcaacagtgagaccatcatgttcctccac
cagatattctaccagggcctgaaggccaggatcgccagctggccaacactggtacttgct
gacctgtttgacatcctgctgcccatgctgaacatctatcaagagtttgtgaggaaccat
cagtacagtttgcagatcctggcccactgcaagcagaacagagactttgataagctgctg
aagcagtacgagtccaagcctgactgtgaggaaaggacgctggagacattcctcacttac
ccgatgttccagatccctcgctacatcttgacattgcatgagttactggctcatactcct
catgagcatgtggaaagaaacagtttagactatgccaagtcaaaactggaagaattgtca
agaatcatgcatgatgaggtgagtgaaacagagaacatcaggaagaacctggccatcgag
cgcatgattgtcgagggttgtgaagtgttgcttgacaccagccaaacatttgtgagacaa
ggttctctaattcaggtgccaatgagtgaaaaagggaaaatcacaagaggccgcctgggt
tctctgtctctgaagaaggaaggagagagacagtgtttccttttctccaaacatctcatc
atttgtacccgaggatcaggaggaaaacttcacatcacaaagaatggagtggtgtctctc
atagactctaccctaatggaggagcccgaggggacagacgatgagtccaaaggggagcga
agcggccaggatgcagagcatctagactttaaagttatggtggagcccaaggaaggccaa
ccttacactgtcatccttgtagcgtcatcacgacaggagaagtcagcatggacaagtgac
ataagtcagtgcatcgacaacatccgctgcaacggtttaatgatgaacgcctttgaggaa
aacagtaaagtctcagtgccacaaatgattaagtcagataccagcttgtactgtgatgat
gtcgacattcgcttcagcaagatgatgaactcatgcaaggtactgcagatccgctacgcc
agtgtggagcgcctgttggagaggctgatcgacttacgctttctctccattgacttcctc
aataccttccttcactcataccgcgtcttcaccagtgcggacatagtcctggacaagctc
atcaccatctacaagaaaccaatcagtgccatccctgcacgctcgttggagctcttcttt
gccagcagccagaacaacaaactcctttacggtgagccacccacgtcgccacgtgccagc
cgcaagttctcctcgccgcctcctctttccatcacgaagaattcctctccgaaccgccga
cgcaaactttcactcaacatccccatcatcactgggggcaaggccctggaccttgcagca
ctcaactgctctcccaatggctatgcaagcatgcacacaaccatgtctcccttcagcaag
accacacttgacattaacaagctctacgtgtccagcacaatggccagcaaaatccctgat
gagggagagtccaaatctgagggcaaagctgaagagtccgcccctggcaagcaagatcgg
tctgtcagagaggaatgtgatgaagagcagagtcagagtgatgaggcagaatcagaaatg
tctcctcccaagtcaccgtcgacacccaagaatgtcaagtcaaaaaactcagagttttcc
ctgttttccttcaacaatggcatggtggtgtcatcttgccgggagcttgagaataaccgc
agtgccctatccgctgcctcggcctttgccattgccacagctggtgccaatgaaggaaca
cctaccaaggaaaagtaccgccgtatgtccctcgccagcacaggttttcctacagatcag
aggaacggagacaaagagtttgttattcgcagagctgctacaaatagagtcctgaatgtg
ctgcgtcactgggtgtccaaacactcacaggactttgagctaaacacagagctgaagatg
cgggttattggcttcctggaggaggtgatgcatgacccagagctcctgacacaggaaaga
aaagcagctgccaacattatcaggactctcactcaggaggatcctggagacagccaggcc
agcattgaggagatcacccagatggctatggaagaaagtaagactgaaccatttgagaac
cattctgccttggagattgctgagcaactgacaatgctggaccacctggtctttaaagtt
atcccttatgaggagttctttggacaaggctggatgaagaacgacaaaaatgagagaaca
ccatacataatgaaaacaaccaagcattttaatgatatcagtaacaggatcgcctcagaa
atccttcactgggatgatgtcaacatgagggtggcagtgatagagaagtgggtggctgtg
gcggacatttgccgctgccttcacaactacaacgccgttttggagatcacatcctcgctc
aaccggagctccatcttccgcctcaagaggacgtggctaaaagtgtctaagcagacgaaa
actgtgattgacaagctgcagaagctggtgtcgtcagagggtcgcttcaaaaacctaagg
gaagctttgaaaaactgtgaccctccatgtgttccttacctgggaatgtacctgactgac
ttggccttcattgaagagggaacaccaaactacacagaggacaacctcgtcaacttctcc
aagatgagaatgatttcccacatcatcagagagatccgacaatttcagcaaactgcttac
aagatagattttcagcctaaggtggcaaagtacttgctggacaacagcacagtgatggat
gaggagagcctgtatgaagcatctctgagaattgagcccaaaacttcatcatga
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