Xiphophorus couchianus (Monterrey platyfish): 114143358
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Entry
114143358 CDS
T05908
Name
(RefSeq) protein snail homolog Sna-like
KO
K05707
snail 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
114143358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114143358
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
114143358
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-C2H2_6
zf-C2HE
zf-met
Zn_ribbon_8
zf-C2H2_15
Zf-C2H2_ZNF451_C
Zn_ribbon_IS1595
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_6th
zf_C2H2_ZHX
Zf-C2H2_ZNF451_1st
HypA
Phage_zn_bind_3
Zn_ribbon_Dof
Motif
Other DBs
NCBI-GeneID:
114143358
NCBI-ProteinID:
XP_027871134
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All DBs
Position
1:complement(17751615..17753816)
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AA seq
272 aa
AA seq
DB search
MPRSFLVKKYFSNKKPYYRENQLESQTAFVPESFPLAELPTQNNASALTCHPISPFFTSS
DALPAPLSPINPVSLAPSPLGPLNLTSSPSSSSGEEEEDGGRTSDPPSPEVIQSIYHCLH
CSKSYGSLSALSHHQLSSHQLPPSGPLLQTASTSSEVSPRPAFHCKHCSKEYTSLGALKM
HIRSHTLPCVCPTCGKAFSRPWLLRGHIRTHTGERPFACQHCNRAFADRSNLRAHLQTHS
EVKKYQCGSCSRTFSRMSLLHKHSSSGCCPSS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgatcttttcttgtcaagaagtatttctccaacaagaagccttattacagggaa
aaccagctggaaagtcaaacagcttttgtcccagaaagctttccactggccgaacttcca
acacaaaacaacgcatctgcgctcacttgccatcccatcagccccttcttcaccagctcc
gatgccctgcctgctcccctctctccaattaacccggtgtccctggctccctctccgctg
ggccctctgaacctcaccagctctccttccagcagcagcggagaggaagaagaggacggc
ggccgtacctcagatccccccagcccggaggtcatccaaagcatctaccactgtctacac
tgcagcaagagctatggcagcctctctgctctctcgcatcatcagctgtccagccaccag
ctccctccaagcggtccattactgcagactgcttccacttcctcagaggtatccccacgc
ccagctttccactgcaagcattgctccaaggagtacaccagcctgggagctctgaagatg
cacatccgctcacacactcttccctgcgtgtgcccaacttgcggcaaagccttctccagg
ccctggctgctcagaggacacatccgcacgcacacaggtgagcgcccctttgcttgtcaa
cactgcaaccgggccttcgccgaccgctccaacctgcgagcccacctgcagacccactca
gaggtgaagaagtaccagtgcggctcgtgctcgcggaccttcagccgcatgtccctgctg
cataaacacagctcctctgggtgttgtccctcatcctag
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