Xiphophorus couchianus (Monterrey platyfish): 114143365
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Entry
114143365 CDS
T05908
Symbol
cul4a
Name
(RefSeq) cullin-4A
KO
K10609
cullin 4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03420
Nucleotide excision repair
xco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114143365 (cul4a)
09124 Replication and repair
03420 Nucleotide excision repair
114143365 (cul4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114143365 (cul4a)
03400 DNA repair and recombination proteins [BR:
xco03400
]
114143365 (cul4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114143365 (cul4a)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
114143365 (cul4a)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
114143365 (cul4a)
TCR (transcription coupled repair) factors
Cul4-CSA complex
114143365 (cul4a)
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114143365 (cul4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_AB
Cullin_Nedd8
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
114143365
NCBI-ProteinID:
XP_027871106
LinkDB
All DBs
Position
4:complement(21676933..21685616)
Genome browser
AA seq
753 aa
AA seq
DB search
MAEDTRQDKRASFSALTEHSTNGMARTSGKTGASKKLVIKNFKDRPKLAENYTEDTWLKL
RDAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPTLYKQLRQVCEDHVRAQIHQFREESM
DNLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRTHIVSDS
AVQKRTVEGILEQIELERNGETVDRSLLRSLLGMLSDLQVYKDSFEERFLTETNRLYAAE
GQRLMQERDVPEYLHHVARRLEEENDRIVSYLDQSTQKPLICCVEKQLLGEHMNAVLQKG
LSNLLDENRVTELALLYQLFSKVKAGLPTLLQFWRDYIKSFGGEIVCTPEKDKDMVQDLL
DFKDKMDNVVQSCFARNEAFINAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATE
EELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAA
FTSKLEGMFKDMELSKDIMIQFKQYMQNQSEPSNIELTVNILTMGYWPSYTPMEVHLPSE
MVKLQEVFKLFYLGKHSGRKLQWQPTLGHAVLKAEFKEGKKELQVSLFQTLVLLMFNEGE
EFSMEETRAATGIEEGELRRTLQSLACGKARVLNKNPRGKDVEDGDRFNFNNDFKHKLFR
IKINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLVSELYNQLKFP
VKPGDLKKRIESLIDRDYMERDKEIPNQYHYVA
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggacacccgacaggacaagagggccagtttttcggctttgaccgagcacagc
accaacgggatggccaggacttcaggaaaaacaggcgcctcaaagaaattagtgatcaaa
aacttcaaagataggccaaaactagcagagaactacacagaagacacgtggctgaagctt
cgagatgcggtgggtgccatccagaacagcacctccatcaagtacaacctggaagagctc
tatcaggccgtggagaacctgtgttcgtacaaagtctcccccacgctgtacaagcagctg
cggcaggtttgcgaggaccatgtgcgggcacagattcatcagttcagagaagagtcgatg
gacaacctttccttcctgaagcgaatgaatcgctgctggcaggaccactgcaggcaaact
ataatgatccgaagcatttttctcttcctggatcgaacatatgtgcttcagaactctctg
ctgccctccatctgggacactgggctggagctgttccgcacacacattgtgagcgacagt
gcagtccagaagcgaacggtggaaggcattttggagcagatagaactggagcgaaacgga
gagactgtggatcgcagtctgctgcggagcctgctgggcatgctgtcagacctgcaggtt
tacaaagactcctttgaggagagatttttgactgaaacaaatcgtctctatgcagctgaa
ggacagcggctgatgcaggagagagacgtgcctgaatacttgcaccacgtagctcgccgt
ttagaagaggagaatgatcgaattgtgagctacctcgaccagagcactcagaagcctctt
atctgctgtgtcgagaaacaacttttaggagagcatatgaacgcagttctacaaaaaggt
ctgagcaatctcctagatgagaaccgtgttactgagctggccctcctctaccagctcttc
agtaaggttaaagcaggactgcccacgctgctgcagttttggagggactatatcaagtca
tttggtggggagattgtttgcacaccagagaaggacaaggacatggttcaagatcttttg
gacttcaaggacaagatggacaatgttgtgcagagctgctttgcacgcaatgaggcgttc
atcaacgccatgaaggaggcctttgaaaccttcatcaacaagaggcccaacaagcctgct
gaactcattgctaaatacgtggactccaagttaagagctggaaacaaggaggcgacagag
gaggaactggagagaatcctggacaagatcatgataatcttccgcttcattcacggaaaa
gacgtgtttgaggctttttataagaaagatttggccaagcgtctgctggttggtaagagt
gcctctgttgatgctgaaaagtccatgctgtccaaactcaaacatgaatgtggcgcagcc
ttcaccagtaagcttgaggggatgtttaaggacatggagctgtctaaagacatcatgatc
cagttcaaacagtatatgcagaaccagagtgagccaagcaacatagaactcactgtaaac
atcctcaccatgggctactggccttcatacacacctatggaggtccaccttccatcagag
atggtgaaactccaggaagtgttcaagctgttctaccttgggaagcacagtggaaggaag
ctgcagtggcagcccacactgggccatgctgtactgaaggcagaatttaaagagggcaag
aaggagctgcaggtttccctgttccaaactctggtgctgctcatgttcaacgaaggggag
gaattcagcatggaggagacccgtgctgctaccggaatagaggagggagagctcaggcga
acactgcagtccctggcctgtgggaaagctcgcgttctcaacaagaaccctcgggggaaa
gacgtggaagatggagatcgcttcaattttaacaatgactttaaacacaaactgttccgc
atcaagatcaaccagattcaaatgaaggaaacggtcgaggagcaggtaagcaccacagag
cgcgtctttcaggacaggcagtatcagatcgatgcagctgttgtgcgcattatgaagatg
aggaaaaccctgagtcataacctgctggtatcagagctctacaaccagctcaagtttcct
gtcaagccgggagacctgaagaagcggatcgagtcgctcatagacagagactacatggag
cgtgacaaggagattcccaaccagtatcactatgtcgcctga
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integrated database retrieval system
