Xiphophorus couchianus (Monterrey platyfish): 114143375
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Entry
114143375 CDS
T05908
Symbol
slc6a5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2 isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
114143375 (slc6a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xco02000
]
114143375 (slc6a5)
Transporters [BR:
xco02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
114143375 (slc6a5)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
114143375
NCBI-ProteinID:
XP_027871123
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Position
4:4357728..4387064
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AA seq
776 aa
AA seq
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MFQDLSEQRDMAKQPAGYIPMQQQEGAAGFTANKPDNTVPCQPHAPHHHPAPQPPRPCNE
SKTFCPPENKPGEPDSNKEYGTFKSAPAPPVPGSVAINSAFRKDSAGDPLRATAEQNNTP
GNWTTMSHTTIILGTDGNTSVQPGTLAGADAVDDDDDDEGGDENKARGNWSNKLDFILSM
VGYAVGLGNVWRFPYLAFQNGGGAFLIPYLTMLGIAGIPIFLLEVSLGQFASQGPVSVWK
CIPALQGCGIAMLIISVLIAIYYNIIMCWTLYYLFASLKGSLPWANCRNEWNTLECKDKD
MLLLDSCILRDKNPVSIKNSTFCLSANAVGNLTKLLNMTADGNKTYVSPSEEYFKYNVLH
ISKGIEYPGDIRWPLAGCLFLAWLIVYASLAKGIKSSGKVVYFTATFPYVVLVILLIRGV
TLPGAADGILYFITPKWEKLNDAKVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCYRD
TIIVTCTNSATSIFAGFVIFSVIGFMAHELKVPIEKVADEGPGIAFVVYPEALTRLPLSP
FWAIIFFLMLLTLGLDTMFATIETIVTSVSDEYPKYLRKHKPLFTLVCCLSFFILGFPMI
TENGMYMLQLVDTFAASYSLVIIAIFELVGISYLYGLQRFCEDIEMMIGFQPNRFWRVCW
AFVTPTILTGILGLSLYQWKVMTYEDYTYPTWSMVLGWLMVICSVIWIPIMFVIKMHLAP
GTVVERLKLVCSPQPDWGPFLMKHRGNRYKNMIDPLGTSSLGLKLPPKDFQLGSYQ
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggatctgtctgagcagagagacatggccaagcagccggccggctacatccca
atgcagcagcaggaaggagcggcgggatttacagcaaacaaaccggacaacacggtgcca
tgccaaccacatgcccctcaccaccacccggcgcctcagccgccgcgtccgtgcaacgag
agcaaaactttttgtcccccggagaataaaccgggagaaccggactccaataaggagtat
gggacgtttaaaagcgcgccggcgcctcctgtccccggatcagtggccatcaactcggcc
ttcaggaaggattcagccggagacccgctccgggccacggcggagcaaaacaacaccccg
ggcaactggacgactatgagccacaccaccatcatactgggaacagatgggaacacgtct
gttcagccggggactttagcgggggcggacgctgttgatgatgatgatgacgatgagggg
ggagatgagaataaggccagaggaaactggtccaataaactggattttattctgtccatg
gttggctacgcggtgggactgggaaatgtgtggaggttcccttatcttgccttccaaaat
ggtggaggtgcttttttgattccctatctgaccatgctgggcatcgcagggatcccaatc
tttttgctggaagtgtctctgggccagtttgccagccaggggcccgtgtcagtttggaaa
tgcattcccgctctccaaggttgcgggattgccatgttgataatatctgtcttgatagcc
atatactataacattataatgtgctggacactgtactacctgttcgcttcgttgaagggc
tcactgccatgggctaactgtaggaatgagtggaacacgctggaatgtaaggacaaagac
atgctgctgttagactcctgcatcctgcgggacaaaaaccccgtttccatcaagaactcc
actttctgtctgtccgccaacgccgtgggaaacctgacaaagctgcttaacatgacggcg
gacggcaacaagacctacgtcagccccagtgaggaatacttcaagtacaatgtgttgcat
atttccaaagggattgaatatccaggagacatccgctggcctctggcaggctgcctcttc
ctggcctggctcatcgtctacgcctcattagccaaagggatcaagtcatcaggcaaagtg
gtttatttcacagccacatttccttatgtggtgctggtcatcctgctgatcagaggagtg
accctccccggtgccgccgacggcatcctgtactttatcacgccaaaatgggaaaaactc
aacgatgcaaaggtgtggaaagacgcagctactcagatcttcttctctttgtcggctgca
tggggaggcctcattacgctctcctcctacaataagttccacaataactgctacagggac
accatcatagtgacgtgcaccaacagtgcaaccagcatttttgctggatttgtcatcttc
tctgttattggtttcatggctcatgaactgaaggtgccaatagagaaagtggcagatgaa
ggtccaggcatagcctttgtggtgtatcctgaagctctgaccagactccctctgtctcct
ttctgggcaattatcttcttcctcatgctccttactcttggactggataccatgtttgcc
accatcgaaaccatcgtgacatccgtgtcggacgagtaccccaaatacttgaggaaacat
aaaccgctcttcaccctggtctgctgcctctccttcttcatcctgggctttcccatgata
acagagaacgggatgtacatgctgcagctggtggacacattcgcagcctcctattctttg
gttatcattgccatctttgagctggttgggatttcctacctctatggtctgcagaggttt
tgcgaggacatcgaaatgatgattggtttccagccaaaccgattttggagagtgtgctgg
gcctttgtgactccaaccatcctgacaggcatcctgggactgagtctgtaccagtggaaa
gtgatgacgtacgaggactacacctaccccacctggtccatggttctgggctggctcatg
gttatttgctcggttatctggatccccatcatgtttgtcattaagatgcacctggcccct
ggcaccgtagtggagcgtctgaagttggtctgctcccctcagcctgactgggggcctttc
cttatgaagcaccgtggaaatcgctacaagaacatgatcgacccattaggaaccagctcc
ctgggtctcaaactgcccccaaaggacttccagcttggttcctatcagtag
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