Xiphophorus couchianus (Monterrey platyfish): 114143377
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Entry
114143377 CDS
T05908
Name
(RefSeq) sodium/potassium/calcium exchanger 1-like isoform X1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
114143377
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xco02000
]
114143377
Transporters [BR:
xco02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
114143377
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
114143377
NCBI-ProteinID:
XP_027871138
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Position
4:complement(3674072..3689128)
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AA seq
765 aa
AA seq
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MQSPQRRRLKRSRVLFFVSGALLCCIYTLSLKTRQSPAPGRTEAGGGHGALEVRLREVRA
SNESLESTMPPLVMVVNRTDLEQCVYVDPRLARAPPTPPLLTTTAPPPQHPTQPPQSQGD
YPEDIFSVEQRRRGWVVLHIMGMTYMFVALAIVCDEFFVPALEVIAAKLKISDDVAGATF
MAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGMCAIFSREMLHLTWWPLF
RDVTFYILDLIMLIVFFLDNVIWWWESALLVLGYMSYVVFMKFNSQIEQTFKSQLSKHVS
IVKVWSTAEPEKDSEAAPPPPPPAAPLPPPAADPQKTENKPKPEAAPAAAGSPEHNNQQP
ETQEDKDRLRVRPVLQRGGSSASLHNTSLRSTIFQLMIHTLDPLGEEAALRGAARTGRPK
KITEETSFNGDVKGEGLVQKKAKNKVKPLDVSVTEKQQNKSHHRRAEDAGHKQKSEQIAS
AGTPGGAAAQPSTSQPPAEETPQKTSEESKAAESAGETGGSQDSAQEDGGEDESGDSSES
EEEEEEKENKEAEEQEKEEESTPLSLGWPDMPRKRATYLFLLPIVFPLWLTLPDVRNQES
RRFFIISFIGSIFWIGIFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIV
ARKGLGDMAVSSSVGSNIFDITVGLPVPWLIYTVIYGKPVAVSSNGLFCAIVLLFLMLLF
VIISIAACRWKMSKKLGVTMFALYFVFLILSVLLEDRILICPVSI
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgccccagcggaggaggctgaagcgcagccgcgtcctcttcttcgtgtcgggc
gcgctgctgtgttgcatctatactctgagtctgaagaccaggcagtctccagcccccggc
aggactgaggccgggggcggccacggcgccctggaggtcagacttcgggaggtgagggcg
tccaatgagtcgctggagagcaccatgcctcctctggtgatggtcgtcaacaggacggat
ctggagcagtgcgtctacgtggatccccgacttgccagagcgcctccaactcccccgctt
ctgaccaccacggcccctcctcctcaacacccaacccagcccccgcaaagtcagggggac
tacccggaagacatcttctcagtggagcagaggcgccgagggtgggtggtcctccacatc
atggggatgacctacatgttcgttgccctggccatcgtctgcgacgagttcttcgtcccc
gcgttggaggtcatcgccgccaagctgaagatctccgacgacgtggccggggccaccttc
atggcggctggcggctcggccccggagctcttcacttccctcatcggggtcttcatctcc
cacagcaacgtgggcatcggcaccatcgtggggtctgccgtcttcaacatcctgttcgtg
attggcatgtgcgccattttttcccgggagatgttgcacctcacctggtggccgctcttc
cgggacgtgaccttctacatcctggacctcatcatgctcatcgtcttcttcctggacaac
gtgatctggtggtgggagagcgcgctgctggtgctgggctacatgagctacgtagtcttc
atgaagttcaacagtcagattgaacagacgttcaaaagccagctcagcaaacacgtgagc
atcgtcaaggtgtggagcacggccgagccggagaaggacagtgaagccgctcctcctcct
cctcctcctgctgctcctcttcctcctcctgctgctgatccccaaaaaacggaaaacaaa
ccaaaacctgaagctgcgccggctgcagcgggaagccctgagcacaacaaccagcagcca
gaaactcaagaggacaaagatcggctccgggtgcgtccagttttacagcgaggcggcagc
tcggcgtcgctccacaacacgtccctgaggagcaccatcttccagctgatgatccacaca
ctggacccgctgggagaagaagcagccctccggggcgccgccagaaccggtcggccaaag
aaaatcacagaagaaacgtcctttaatggtgatgtcaaaggggaggggcttgtgcagaag
aaagcaaagaacaaagtaaaacctctggatgtctcggtgacagagaaacagcagaacaag
tcacatcaccgccgcgctgaagatgcgggtcacaaacagaagtcagagcaaattgcttct
gctggaacaccagggggcgccgcagctcagccgtccacctcgcagcctccagcagaggag
actccgcagaaaacctcagaggagtcaaaggcagcagaatcagctggagaaactggagga
tcgcaggacagcgcccaggaagatggcggcgaagacgaaagcggcgactctagtgagagc
gaggaagaagaggaagaaaaggaaaacaaagaagcagaagaacaagagaaggaagaggag
agcacgccgttatccttggggtggcccgacatgccgcggaaacgggccacatacctgttc
ctgctgcccatcgtgttcccgctgtggctcacgctgccggacgtccgcaaccaggagtcc
agaagattctttatcatctcgtttatcggctccatcttctggatcggcatcttctcctac
ctgatggtgtggtgggcgcatcaggtaggcgagactatcggcatttctgaggagatcatg
ggcctgaccatcctggcggcaggaacgtccatcccagacctcatcaccagcgtgattgta
gctcggaaaggtttgggagacatggccgtctccagctccgtgggaagcaacatcttcgac
atcacagttggcctgcccgtcccctggctcatctacaccgtcatctacggcaagccggtg
gcggtcagctccaacggcctgttctgcgccatcgtgctgctcttcctcatgctcctcttt
gtcatcatctccatcgccgcctgccgctggaagatgagcaaaaagctgggcgtcaccatg
ttcgccctgtactttgtgttcctcatcctcagtgtcctgctggaggaccgcatcctcatc
tgtcccgtctcaatctga
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