Xiphophorus couchianus (Monterrey platyfish): 114143404
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Entry
114143404 CDS
T05908
Symbol
sema6d
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
114143404
NCBI-ProteinID:
XP_027871193
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Position
4:24647844..24670515
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AA seq
1114 aa
AA seq
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MGQGAALLLSKLLLLLAASRTLLAVSFPEDIVPLDVVDAHFTRRYPVFRGRPSVNDSQHR
LDFQLMTKIQDTLFIAGRDQVYLVSLRESYRNEIISYRKLTWRSGQGDREMCAVKGKHRD
ECHNFIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLEFDGEEINGLARCPFDSKQTNVA
LFAEGKLYSATVADFQASDSVIYRSMGDGSALRTIKYDSKWLKEPHFLHAAEFGNYVYFF
YREIAVEHSNLGKVVYSRVARICKNDVGGSQRVLEKHWTSFVKARLNCSVPGESFFYFDV
LQSITDIIDVNGVPSVVGVFTTQMNSIPGSAVCAFSMTDIEKVFMGRFKEQKTPDSVWTP
FPEEKLPKPRPGSCAGHGPAASFKSSVEFPDDTLQFIKSHPLMDTAVPSIGDEPWFTKTR
VRYRLTALAVDGQAGPHKNYTVVFIGAESGVVLKVLAKTSLLSLNESLLLEEIDVFNRAK
CPSNREDDKRVLSLHVDNNTHSLYVAFSSCVIRIPLSRCERHSSCQKSCIASRDPYCGWK
PHGACERIQPGVLKGYEQDVEYGNTTHLGDCQVFLGTTSAPDYKSFGDPTSDMAFSSAPV
TVQPSGPIQPPVLIPSQSPSSGPRPELYGSGFVLQDDPATSHSLNSLPGGPEGVWDIRTG
DSNQMVHMNILITCVFAAFLMGALLAGLIVFCYRDSVLRKPRHVHKDMESAPSCSDSTGS
FVKLNGLFDSPVKVQQENEYQSNIDSPKLFTNLLSNGKDLNTPNGDTKTMILRDGCQPPE
LAALPTPESTPVLQQKGLQPIKNQWEKAHGKVSGPHKEANPSAKSPQFLSSSPAPANASS
NHPHIALGHSNIPSAVVLPNATHDQPNLDHGDETLPHSSEKQLKIPDCKGNRKDQKRSVD
ARNTLNDLLKHLNDSVANPKAILQEESGPRPRPHLMLEPMEELTEVPPAVPSREASLYSP
SSSLPRHSPTKRVDVPMPSTPTTPTGSLSMGGTLERQRGGYQLHRSASHRQSLSTSPNGV
TMGVSVSRQHSMNRGGYMPPTPPSRLDSHGAMVASGMHSPHPPSVSRQSSYSGHGSLPRT
GLKRTPSLKPDVPPKPNGFPPQTPQMRVVNKYSY
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgggccagggagctgcgcttctgctcagcaagcttctgctgttgctggcagcctcgcgc
actctcctcgcagtcagcttcccggaggacatcgtgcccctagacgtcgttgacgcgcac
tttacacggcggtaccctgtgttcagaggcaggccctctgtcaacgactcccagcatcgc
ctcgactttcagctgatgaccaaaatccaggacacgctattcatcgctggcagggatcag
gtgtacctcgtcagtctgagagaatcctacaggaatgagatcatttcttaccggaagtta
acatggcgatcgggccaaggtgacagagagatgtgtgctgtgaagggaaaacatagagat
gagtgccacaactttattaaagtgctggttcccagaaatgatgacctggtgttcatctgt
ggcaccaatggcttcaaccccatgtgcagatactacaggctggataacctcgagtttgac
ggggaagagatcaatggtttggcgcggtgcccgttcgactccaagcaaaccaacgtggcc
ctcttcgctgaggggaagctgtattctgcaacagttgctgacttccaggccagtgattct
gtcatctaccgtagtatgggtgatggatcagcactgagaaccatcaaatacgactccaaa
tggctgaaagaacctcatttcctgcatgcagccgagtttgggaattacgtgtactttttc
taccgggagattgccgtggaacacagcaacctgggaaaggttgtttattcccgagtggcc
cggatctgcaaaaatgacgtcggcgggtcgcagcgagtactggagaagcactggacctct
ttcgtgaaggcgaggctgaactgttccgtgccgggggagtccttcttctacttcgacgtg
cttcagtccatcaccgacatcatcgacgtcaacggagttccctctgtggtgggcgtgttc
accacacagatgaacagtattccggggtcagcagtgtgtgccttctccatgactgatata
gagaaagttttcatgggccggttcaaggagcagaagacccctgactctgtgtggacgcca
tttccagaggagaagctgccaaaacctcggcctgggagttgtgcaggtcatggtccggct
gcatcctttaagagctctgtggagtttccagacgacaccctgcagttcatcaagtcccac
ccccttatggacacagctgtgccttcgattggggacgagccttggttcaccaagacacgt
gtccggtaccgactaacagcgctggctgtagacggccaagcaggaccccacaagaactac
acggtggtcttcatcggcgctgagtcgggggtcgtccttaaggtcttagcgaagacttcc
cttctatccctgaatgagagtctgttgctggaggagattgatgtcttcaatagggccaag
tgcccgtctaaccgtgaggatgataagcgtgtcctttcgcttcatgtggacaataacaca
cacagcctttatgttgccttttcaagctgtgtcatccgtattcccctgagtcgctgtgaa
aggcactcctcctgccaaaagtcatgcattgcatcaagagatccttactgtggctggaag
cctcatggagcctgtgagaggatacagcctggtgttttgaaaggatatgaacaggatgtt
gaatatggaaataccactcaccttggagactgtcaagtgtttttgggcactacctcagcg
ccagattacaaatcatttggcgaccctacctctgacatggcgttttcatctgcaccagtc
actgtccaacccagtgggcccatacagcccccagtactcatacccagtcaaagccccagc
tcagggcctcgtccagagctctacggctcaggctttgtgctacaggatgacccagccaca
tcccattctttaaactctctcccaggggggccagagggtgtatgggatatccgtactggt
gacagtaaccagatggtccacatgaatatcctcatcacctgcgtctttgctgcttttctg
atgggggctctcctggctgggctgatcgttttctgctatcgagactctgtccttcgtaaa
ccaaggcacgtccacaaggacatggagtctgcaccatcctgctctgactcaactgggagt
tttgtcaaactcaatggtctatttgacagccctgtaaaggtacaacaagaaaacgaatac
caaagcaacatcgattctcccaagctgttcaccaatctgcttagcaacggtaaagacttg
aatacgcccaatggtgacaccaagacaatgattctgcgggatggctgtcagcccccggaa
ctggctgctctacccactccagagtccactcctgtacttcagcagaaaggcctacagccc
atcaagaaccagtgggaaaaggctcatggaaaggtcagcgggccccataaggaagccaac
ccatcagcaaagagtccacagtttctttcttcttcacctgcacctgctaatgcaagttcc
aaccaccctcatattgccctgggacactccaacatccccagtgcagttgtgctgcccaat
gctacacatgaccagcctaaccttgaccatggtgatgaaactttgccacattcttctgaa
aagcaactgaagattccagattgtaaaggaaacaggaaagatcagaagaggtctgtggat
gccaggaataccctgaatgatcttttaaaacatcttaatgactctgtggccaacccaaag
gccattctacaagaagaatcagggcctcgcccaaggcctcatctcatgctggagccaatg
gaggaactgactgaagtaccgccagctgtgcccagccgtgaagcttccttgtattctccc
tcctcctctctaccaaggcacagtcccactaaaagggttgatgttcccatgccttccact
cccactacacccacaggaagcctaagcatgggtgggacccttgaaaggcaaagagggggt
taccaactccaccggagtgcctctcacaggcagtccttatcgacctcaccaaatggagta
accatgggggtgtctgtgtctcgtcagcacagtatgaacagagggggatatatgccccca
acacccccttctagacttgactctcatggtgcaatggtggcatcagggatgcactcaccc
cacccaccttctgtttctcgacagagcagctacagtgggcatggctcgcttccccgaaca
gggcttaaaaggaccccatcattaaagccagatgtgcccccaaaacccaatgggtttcct
ccacagactccacagatgcgagtggtcaacaagtacagttattaa
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