Xiphophorus couchianus (Monterrey platyfish): 114143410
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Entry
114143410 CDS
T05908
Name
(RefSeq) caprin-1-like isoform X1
KO
K18743
caprin-1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114143410
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
114143410
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
114143410
NCBI-ProteinID:
XP_027871226
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Position
4:complement(19176993..19186581)
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AA seq
638 aa
AA seq
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MPSAAVGNNAVQCAIPDLGNGSHSEAMKQFLGVIDKKVRNMEKKKSKLDDYQARKNKGER
LNQDQLEALSKYQEIINNLEFARELQKSFLALGQEVQKAVKKSARREQLQREEMEQRRLK
TVLELQYLLDQLGEDGVRQDLKRPDSSGSPLLTDADLASFDEFYKLVGPDRNCDIRLTDQ
YEEASQHLWSLLEGRDKSVAGTTYKSLRETLDKLLVSGYFDRAESKQNGACETEEKPEEQ
AVVDETTVTGEQPPEPEGPNNENYTEPVQVETTEVFFNRQFVPETTYSNTDKDQVEEWSV
EAQMNSLQHHPPAQLASEPTMAVNQAAPSPTTDPVVRKQAVQDLMAQMQGTYNFMQDSML
EFDGQALDPAIVSAQPVKALQTVDLQQMGGPSIHSEPRLPQTSTVSGPQESSQTSMSLSS
EQSSAPCSLSTAFPPVSKHIHSGGINVNAAPFQSVQAVFNMNAPVPPPTDGQADALKPSS
QFPGGYGQGFTSQSENTVEQPEMPQERLQSVVGGFQPQDQVMPSTVSHDDPSAGSGFGPS
SQSFYSSRGAPRGGPRNTRGIMNGYRGSSNGFRGGYEGYRAPFSNAPSSSGYGQTQFNTS
RDYSNSSYQREGYQQGYKRGTAQGSRGLSRANAQAMRS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagcagcggttggcaacaatgctgtccagtgtgccattccagacttgggaaat
ggaagtcattctgaagccatgaagcagtttcttggtgttatcgacaaaaaggtccggaat
atggaaaagaaaaagtccaaactggatgactatcaggccagaaagaataagggagaaaga
ctgaatcaggatcagctggaagccttgtcgaagtatcaagagatcatcaataaccttgaa
tttgctcgagaactgcagaagagcttcctggctttgggccaagaggtccaaaaggcagtg
aaaaaatctgcacggcgagagcagcttcagcgggaggaaatggaacagaggcggttgaag
acggttttggagcttcagtatttgttggaccagctaggggaggacggcgtgcgacaggac
cttaaaagaccagattcctctggctcccctctactcacagatgctgaccttgcatctttt
gatgagttttataaactggtgggtcctgacaggaactgtgatatcagattgactgaccag
tatgaagaggcctcacagcacttgtggtctctccttgagggtcgagacaagtctgtggcg
ggaaccacatacaagtcactgagagagactctggacaaactactggtcagtggttacttt
gacagagcagaatctaaacagaacggagcttgtgagacagaagagaaaccagaagagcag
gctgttgtggatgaaacaacggttaccggggagcagccacctgaacctgaaggaccaaat
aatgaaaactacacagagcctgtccaagtggaaaccacagaggttttttttaacagacag
tttgttccagaaactacatacagtaacactgacaaagaccaagtggaggagtggagtgtg
gaggctcagatgaattccctccagcaccacccgcctgcgcagctggcttctgagcccacc
atggctgtgaaccaagctgctccctctcctaccactgaccctgtggtcagaaagcaggcg
gtgcaagatctcatggcccaaatgcaaggaacttacaacttcatgcaggactccatgttg
gagtttgacggccaggctctggacccagccatcgtgtctgcccagccagtgaaagctctg
cagacggttgacctgcagcagatgggtggcccttcaatccactcagaacccagacttcct
cagacaagtactgtatctggaccacaggaatcctcccaaacctctatgtctctgtcatct
gaacagtcttctgccccatgttccctgtctaccgccttcccacctgtctccaaacatatc
cactccggaggcatcaatgtgaacgcagcacctttccagtcagtgcaagcggtatttaat
atgaatgcacctgtacctccacccactgacggccaagcagatgcactgaagccatccagc
caatttcctggtggctatggccagggctttaccagccagtcagagaacactgtagagcag
ccggaaatgccacaggaaagattacagtcagttgttggtggattccagcctcaagatcag
gtcatgccatcaacagtaagtcatgatgatccctctgcagggtcagggttcgggccgtcc
agccagtcgttttacagcagcagaggtgcgcccagaggtggacccagaaacacccgtggc
attatgaatggataccggggctcctcaaatggatttagaggtggttatgaaggataccgt
gctccgttttcaaacgctccttccagcagtggttatggccaaacccaatttaacacatct
cgggactattccaacagcagctaccagcgtgagggatatcagcaaggctacaagcgggga
actgcccaaggatcaagaggcctgtcccgggccaacgctcaagcaatgcgatcctaa
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