Xiphophorus couchianus (Monterrey platyfish): 114143633
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Entry
114143633 CDS
T05908
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114143633
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
ig
V-set
LRR_9
Ig_2
LRRNT
Ig_6
Syndecan
Egh16-like
Motif
Other DBs
NCBI-GeneID:
114143633
NCBI-ProteinID:
XP_027871663
UniProt:
A0A3B5MG46
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Position
4:5333927..5383178
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AA seq
631 aa
AA seq
DB search
MWNTMIYSLQRQTMRGRRLKGALSNPLFVVLLALQILVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRSIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFKDLTNLRYLNLGMCNLKEIPNILPLIRLEELEMSGNQLSVIKPSSF
TGLVSLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTFLPHDLFTPLHRLERVHLH
HNPWNCNCDILWLSWWLKETVPANTSCCARCHSPSTFRGRYIGELDHSYFQCDVPVIVEP
PSDLNVTEGMGAELKCRTSSLTSISWLTPNGSLITHGAYKVRLSVLNDGTLNFTSVTMQD
TGTYTCMVSNTAGNITASAVLNVTAVENNGVTYFTTVTVETIETPVDDSQTPLPPYGWVP
SSTTKGMPVLTRTTERTYTIPILNGDGEGALNGLDEVMKTTKIIIGCFVAITLMAAVLLV
IFYKMRKQHNQQDPDGPASSMEVITVEEELAGVAAMERHLSLPPLEHYNHYNTYKSTYHH
PPMLSTIHSSATQEPLLIQACSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacacaatgatctactccctccaacgccagacaatgagaggtcgtaggctgaaa
ggggcactgtccaaccccctttttgtggtgcttttggctcttcagatactggtggtggct
ggactagttcgtgctcagacctgtccttctgtctgctcatgtagtaaccagttcagcaaa
gtcatctgcacacgtcgtggtctacgggatgtcccagatggcatctctaccaatactcgg
tacctgaatcttcaggacaacctgattcaggtgatcaaggtagacagtttcaagcatcta
cgccatctggagattttgcaactcagcaagaatcatatccgcagcattgaaattggtgct
tttaatgggctggcaagtctgaacacattagaactctttgataatcgacttacaacaatt
cccaatggagcgtttgagtacttgtccaaacttaaagaactctggctacgaaacaatccc
attgaaagtataccatcttatgccttcaaccgggttccttcacttcgaaggctagatcta
ggggagctcaaacgtctctcctacatttctgatggagcttttaaggacttgaccaacctg
cgctatctgaacttgggaatgtgcaacctcaaagagatccctaacatcttacctttaatt
aggctcgaagagctagaaatgtcgggaaaccagttgtctgtcattaagcccagctcattt
acaggtttagtgagccttcaaaagctgtggatgatgcatgcccaaatccaaaccattgag
agaaattcctttgatgatcttcagtcactagtggaactcaacctggctcacaacaacctg
acctttttgccacatgacctctttacaccattgcatcgtctggaaagagtgcacctccat
cacaacccttggaactgcaactgtgatattttgtggctcagctggtggcttaaggaaact
gtgcctgccaataccagttgctgtgctcgttgtcattctccttcaacctttagaggtcgt
tatattggggaactggaccacagctacttccagtgtgatgttcctgttattgttgagccc
cccagtgacctgaatgtgacagaaggcatgggtgctgaacttaaatgtcgtacaagttcg
ctgacatccatcagctggctcacaccaaatggctctttgataacacatggggcttataag
gtacggttgtccgtactcaatgatggaacattaaattttaccagcgtaacaatgcaggac
actggaacttacacttgtatggtcagcaacacagcaggaaacattactgcttctgcagtc
cttaatgtcactgcagtggaaaacaatggagttacctattttaccacagtcactgtggaa
accattgagacccccgtggatgacagtcaaacaccactacccccatacggctgggtacca
tcctctactacaaaaggtatgcccgttttaacaaggaccacagaacggacttacaccata
ccaattcttaatggagatggagaaggagctctcaatggtctggatgaggtgatgaaaacc
accaagattatcattggctgtttcgtagccattacactcatggccgctgttctactggtt
attttctacaagatgaggaagcagcataaccaacaggaccctgatggtcctgcctcctcc
atggaagtcattactgttgaagaagagcttgcaggtgttgctgctatggagagacaccta
tcgctccccccactggagcactacaaccactacaacacgtacaagagcacttatcatcac
cctccaatgctcagcaccatacacagctcggctacacaagaacctttactgattcaagct
tgttcaaaagacaatgtccaagaaacccaaatctga
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