Xiphophorus couchianus (Monterrey platyfish): 114143663
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Entry
114143663 CDS
T05908
Symbol
shank2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SAM_2
SH3_2
Ank_5
Ank_3
PDZ
PDZ_6
FERM_f0
SH3_9
SH3_1
PI3K_rbd
Motif
Other DBs
NCBI-GeneID:
114143663
NCBI-ProteinID:
XP_027871721
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All DBs
Position
4:1412535..1600204
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AA seq
2049 aa
AA seq
DB search
MFTCAAGRRLHQRPLPLSPLLHLPAPPASSCWRGDEPLGAALGGCRLGLNFCSELLGFLP
HPGGRVYRLQSAEPHFAWKFPQQRSSTGRGAPARTAGGHGAALGGDPARGREPLQAEQEP
EPRSRERRKPDPVLQSGSPPDPMAEMLNPPALLSMPRSPTSSEDEMAQSFSDYSDDGASD
SSREETIYETIRATGEPPQNHMDDIQSNSLVIRVLIPDLQQTKCMRFNPDATVWIAKQRI
LCSLNQTLKDVLNYGLFQPASNGRDGKFLDEERLLREYPQPISKGVPCLEFRYKSRVYRQ
PNIDEKQIAKLHTKANLRKFMDLIQQNQVDKVGKLLERGLDPNYHDGDTGESPLTAAAQL
DNGVEMIKVLRNGGAHLDFRAKDGLTSLHKAARAKNQLILMTLLELGASPDYKDSRGLTP
LYHSVVTGGDPGCCELLLSQHASVCCQDENGWHEVHQACRHGHVQHLEHLLFYRALMSAQ
NASGNTALHICALYNQDNCARVLLVRGADKEVKNYNSQTPFQVAIIAGNFELAELIKNHK
DSDIVPFREAPAYSKRRRGPSSGSGNGQSPSSLSAPRVLLRSNSDNNLSVSQYQQQQQQH
GSPGNWAPHLQQHQSHQHRGPQQGHAQPGSSALHRSLSPQLVQQMPSGSPNGNVVVRTMG
RGARSRSPSLSRLGEESRRAQTAQRQPSPSGHGEALGPRRKLYSAVPGRHFVVVRSYSVQ
AEGEINLYKGDRVKVLSIGEGGFWEGSARGQVGWFPADCVEEVPAKATEERTYSRADRAD
RRKLFRHYTVGSYDSFDASSDCVVDEKTVVLQKKENEGFGFVLRGAKADTPIEEFTPTPA
FPALQYLESVDEGGVAWQAGLRTGDFLIEVNQENVVKVGHRQVVNMIRQGGNRLLIKVVT
VSRNLDPEDTARKKAPPPPKRAPTTALSMRSKSMTSELEELVDKATLRKKKGDAQKKRIV
FQVTLNKVEEMTHAQKSSPVDTKIATIKPRPSSRCLVTPTDMNSMYHDRQGVAVVPPTVP
GAYLGIPEKGTMRKQKSIGTSEDDKQGLLTPPLLKFSRSLSMPDTSEDIPPPPAISPPSP
PAYNSAPGPTAKNYGTTRPSFTQNSPNAVTTISRTTDVGRLRRGYFRQSSEQFESTRTRG
RTPVPENPYSEVGNKTLYVPAKPARRKGMLVKQPNVEDSPEKTCHVPSSPSGPVSMPTTP
VERTCSSIPIPTIIVKEPSTSSSGKSSQGSSMEIEPTTPEHPPLTPTIGGGGGLRPEDPM
SLNNPFAAAIAGAVRDREKRLEAKKHSIAFQSIDIGDDEMSGPAPTPRLRQSKSIDEGMF
SSDERLRRILAPPSTVQLGPPVGGGSGNMTDFNTPEPTVVREPLNTRTGQCPNLDSPVSL
PATPPKSHYKANGTYLHPVTGKPLDPNSPLALALAARDRAMKEQQNHPQNQPINPPQVQQ
TSKHEAQSLPLQQSHKPDLNQPLFIDTKLRSGIETSFAAISSATMGRPGRGGLRRQMTEQ
KYESDGARAQRQHQTVEERKSAPAIVADSSQPKSTGLLMVHTSTDTTNNKTNNQEVEVQE
SNRPSELKDPNQPDPHKVPTLLSNPQQAASRRRSVPLGESLEEPVKLPFRIPPPPLASVD
IDEEFEFSEPLPPPLEFANSIDIPDDQASAMAEMIQQQRRNGGPALPPYHPHAPPSVSDH
HKRLLNNMPPSYHPAPSDAESGVADSGIEEVDSRSSGDPQHMETTSTVSSISTLSSEGGF
CDSTLESLYTTADGHAFLVDRPPVPPKPKGKSVINRTSLYHDALIEEPPESYGSPPQAPP
PPPSSSEPPRTPSQRTSKLWGDQPPELRSPPSTPDSKNTVITELSSILQHMNRDRPTKPG
DGLDSPTATRGGFTSRAPPDDSGMRNSGAAALSSTPPSSLPSQANPCSPPDSASSLTPCS
SLPPSVSPTLTDVFGLPTPPMGSGGGYSLSSSCGGSGSSRSPSPLTLMQAVAASGKPFAS
KPVELWSKHDVADWLDSLNLGEHKDAFLDNEIEGAHLPSLQKEDLIDLGVTRVGHRMNIE
RALKLLQDR
NT seq
6150 nt
NT seq
+upstream
nt +downstream
nt
atgttcacctgtgcagcggggaggcggctgcatcaacgcccccttcctctctctcctctc
ctccaccttccagctccgcctgcctcctcctgctggcggggcgatgagccgctcggagcc
gcgctcggtggctgtcgcctcggattgaatttctgctcggagctgctcggatttcttccc
caccccggaggtcgggtttacaggctccagtccgcagagccgcactttgcctggaagttc
ccccagcagcggagctccaccggccgcggcgcgccggcgcggacagccggaggacatgga
gcggctttaggaggagacccagcccgggggagggaacctcttcaggccgaacaggaacca
gaaccacgttcaagggagcgccggaagccggacccggtccttcagagcggttctcctccg
gatccgatggctgaaatgttgaatccgccggctctgctcagcatgccccgcagccccacc
tccagcgaggatgaaatggcccagagtttttccgactactccgatgacggcgcgtccgac
agctcccgggaggaaaccatctacgagacgataagagcgaccggcgagccgccgcagaac
cacatggacgacatccagtccaactcgctggtgatccgcgtcctgatcccagacctgcag
cagacgaaatgcatgcggttcaacccggacgcgacggtctggatcgccaaacagcgcatc
ctgtgttcgctcaatcagaccctgaaggacgtcctgaactacggactcttccagccggcg
agcaacgggagggacggcaagttcctggacgaagagcgcctcctccgagaatacccgcag
ccaatcagcaagggcgtcccctgcctggagtttcgctacaagagcagagtctacagacag
cccaacatcgatgagaagcagattgccaaacttcacaccaaggccaacctgaggaagttc
atggacttgattcagcagaaccaggtggacaaagtggggaagctgttggagcgaggcctt
gacccaaactaccacgacggtgatactggtgagagcccgctgacggcggcggcccagctg
gacaacggcgtggagatgatcaaggttctgaggaacggaggagctcatctggacttcagg
gccaaggacggcctgacttcccttcacaaagccgcacgcgccaagaaccagctcatcctc
atgacgctgctggagctgggagcgtctccagactataaggacagccgcggcctgacgccg
ctctaccacagcgtggtgacgggcggagaccccggctgctgcgagctgctgctcagccag
catgcctccgtctgctgccaggacgagaacggctggcacgaggtccaccaggcctgccgc
cacggccatgtgcagcatctggagcatctgctgttctacagagcgctgatgagcgcccag
aacgcctcggggaacaccgccctgcacatctgcgccctctacaaccaggataactgtgcc
agagtgctgctggtccgtggagccgacaaggaagtgaagaactacaacagccagactcca
tttcaggtggccattattgcaggaaactttgagctcgccgaactcatcaagaaccacaaa
gactctgatatagtgcctttccgtgaggccccagcctactccaagcgccggcggggtccg
tcctctggcagcggaaacggccagtccccgtcctcgctgtcggcgccccgggtcctcctg
cgctccaacagcgacaacaacctttctgtgagccagtaccagcagcagcagcagcaacac
ggttcccctggaaactgggccccccatctgcagcagcaccagagccaccaacaccggggc
ccccagcagggccacgcacagcctggctcctcagctttgcaccgcagcctgtccccccag
ctggtccagcagatgcccagcggcagccccaatggcaacgtggtggtccgcactatgggg
cggggggccaggagccgctccccctccctcagtcggctgggcgaggagagccggcgggct
cagaccgcacagcggcagcccagccccagcggtcacggcgaggcgctcggccccaggagg
aagctgtacagcgccgttccaggcagacactttgtggtggttcgctcttactccgtccag
gctgagggagagatcaacctctacaaaggcgacagggtcaaagttctgagcatcggagag
gggggcttctgggagggcagcgcccgcggtcaggtgggctggtttccggccgactgcgtg
gaggaagtcccggccaaggccaccgaggaaaggacctattcccgagcggaccgggccgac
agacggaaactcttcagacattacaccgtgggctcgtacgacagcttcgatgcttccagt
gactgcgtggtggatgagaagacggtggtgctccagaagaaggagaatgagggcttcggc
ttcgtcctgcgcggggccaaagccgacacgcccatcgaggagttcacgcccacgccggcc
ttcccggcactgcagtacctggagtcggtggatgagggcggtgtggcctggcaggcgggg
ctccggacgggcgacttcctcatcgaggtgaaccaggagaacgtggtgaaggtgggccac
aggcaggtggtcaacatgatccgccagggaggaaaccggctgttgatcaaagtggtgaca
gtgagccggaacctggaccctgaagacacggcgcgcaaaaaagctcctccaccgccgaag
cgagctcccaccaccgccctgtccatgcgctccaagtccatgacgtcagagctggaggaa
ctcgtggataaagccacactaaggaaaaagaaaggtgatgcgcagaagaagaggattgtt
ttccaagtgactctaaataaagtggaagagatgacgcacgcccagaagagctcacctgtg
gacacgaagatcgccaccatcaaacctcggccctccagtcgctgcttggtcactcccact
gacatgaattccatgtatcacgaccgccagggagtagcagtggtgccgcccactgtgccg
ggagcctacctggggatcccagagaagggcaccatgaggaagcagaagtctataggtaca
tcggaggatgataaacagggactccttacgcctcccctgctcaagttctcccggagcctt
tcgatgcctgacacctcagaggacatcccgcctcccccagcgatttctcccccttcacca
cctgcctacaactcagctcccggacctacagccaagaactacggcaccactcgaccgagc
ttcacccagaactcgcctaatgccgtgacgaccataagccggaccacagatgtcggcagg
ttacggcgtggatatttccgccagagctctgagcagtttgagagcacgcgcactagaggg
cgcacacccgtacccgagaacccttactccgaagtcggcaataagaccctatatgtgcca
gcgaaaccagctagaaggaagggaatgctggtgaagcagccaaacgttgaggacagtcca
gagaaaacgtgtcatgtgccatctagtccctcaggcccggtttccatgcccaccacacct
gtcgaaaggacctgctcctccatccccatacccaccatcatcgttaaagaaccttccacc
agcagcagtggcaaaagcagccagggtagcagcatggagattgagcccactacgccagaa
catccgcctctaacgcccaccattggtgggggtggagggttgcgtcctgaggacccgatg
tctcttaacaacccgtttgcagcagctattgccggagcggtgcgcgaccgtgagaagaga
cttgaggcgaagaagcactccatcgctttccagtcaatagacataggagatgatgaaatg
agtggccctgcaccgacccctcgtcttcgccagtccaagtccatagacgaaggcatgttc
agcagcgatgaacgcctccgacggatattggctcctccttctacagtgcagcttggaccc
cctgttggtggtggcagtggaaatatgacagatttcaacacgcctgagcccacagtggtc
cgggagcctctgaacactagaacaggccagtgtccgaatctggacagtccagttagtctc
ccagccactcctcctaagagccactacaaggctaatgggacctacctccatcctgtcact
ggtaaacctttggacccgaactctcctctggctctggctttggcagctcgtgaccgggcc
atgaaagagcaacagaaccaccctcagaatcagccaataaatcctcctcaggttcagcaa
acctccaagcacgaagcccagtccctgccacttcagcagagtcacaaaccggacctcaac
caaccgctttttattgacaccaaattacgctcggggattgagaccagcttcgcagcaatc
tcctcggccaccatggggcggccgggtcgaggtggcctccggcgacagatgacagagcag
aagtatgaatctgacggcgcgcgggcacagcggcagcatcagaccgtcgaggagagaaaa
agcgcgccagcaatcgtggcagactcgtcgcagcccaagtcgactggactgttgatggtc
cacacgagcacagacacgacgaacaacaagacgaacaaccaggaggtagaggtgcaggag
agcaaccgaccctctgagctgaaggatcctaaccagcctgaccctcacaaagtcccaacc
cttttgtccaatcctcagcaagctgcctcacggagaagaagtgttcctttaggagaatct
ttggaagaaccagtgaaactgcccttccgcatcccccctccaccgctagcatcagtcgac
atcgatgaggaatttgaattttcagagcctcttcccccaccgctggagtttgcaaacagt
attgacattcctgacgaccaggccagtgccatggcagagatgattcagcaacagagacgg
aatggaggacctgctttacccccttaccatccacacgcccctccatctgtcagtgatcac
cacaaacgcctgttaaacaacatgcccccctcctaccatccagctccatctgatgcagag
tcgggggtggcggattctggcatcgaggaggttgacagccgcagcagtggagatcctcag
cacatggaaaccaccagcactgtctccagcatctccaccctgtcatcagagggaggcttc
tgcgacagcactttggagagtctctacaccaccgcagacggacacgccttcctggtggac
cggccccctgtcccacccaaacccaagggcaagtcagtcatcaacagaacatcgctttat
catgacgctctcattgaagagcctcctgagtcttatgggtcgccgcctcaagcgcctccc
cctcccccttcatcttctgagcctcctaggactccttcacaaaggacatccaagctgtgg
ggcgatcagccccccgagctacgcagccccccatccacgccagactccaagaacacggtg
attactgagctcagctccatcctgcagcacatgaatcgcgacaggccgaccaagccagga
gacggcctcgactcccccactgcgaccagagggggcttcacgtccagggcccccccagac
gactcaggaatgcgtaacagcggcgcggcggcgctcagctccacgcctcccagcagcctc
ccgtcgcaggcgaacccctgcagcccgccggactccgcctcctcgctcacgccctgctcc
tcgctgcctccctccgtgtcgcccacgctcaccgacgtcttcggcctgcccacgccccct
atgggcagcggcggcggctacagcctgagctcgtcgtgcggcggcagcggcagctcgcgc
tcgccgtcgccgctcacgctgatgcaggcggtggcggcgtccgggaagccgttcgcctcc
aaacccgtggagctgtggagcaaacacgacgtggccgactggctggacagcctgaacctc
ggcgagcacaaagacgccttcctggacaacgagatcgagggcgcgcatctgccgtcgctg
cagaaggaggacctgatagacctgggcgtgaccagagtgggccaccgtatgaacatcgag
cgcgccctgaagctgctgcaggacagatag
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