Xiphophorus couchianus (Monterrey platyfish): 114143716
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Entry
114143716 CDS
T05908
Symbol
igdcc3
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 3
KO
K22654
immunoglobulin superfamily DCC subclass member 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114143716 (igdcc3)
Cell adhesion molecules [BR:
xco04515
]
Immunoglobulin superfamily
DCC/UNC5 family
114143716 (igdcc3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Fn3_VIN3
Ig_5
Ig_C17orf99
fn3_SORL1
Pur_ac_phosph_N
Ig_4
Interfer-bind
Ig_RIMBP2
Syndecan
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
114143716
NCBI-ProteinID:
XP_027871799
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Position
4:complement(19826816..19897746)
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AA seq
763 aa
AA seq
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MASTRRQCLVSCSLGILLNALIGVVLGAELSFKLEPSDIIAVQEQPLLLHCQVDGIPPIT
TQWRRNGLLLAQDRHHATFINGSLLIIHFQKTKPDGSSDEGDYECMAQNSFGRVVSRKAR
IQAATMADFHVQPESVHAEESGVARFQCQIHGLPEPLISWEKDRRPVDTTNERYTLLPTG
VLQITGVREEDSGKFCCVAHNSAGVKHSAEALLTVSGSQSSVYKEPMILVGPENLTLTVH
QTAILECVATGYPRPIVSWSRLDGRPIGVEGIQVLGTGNLMISDVGVQHSGIYVCAANKP
GTRVRRTAQGRLVVQAPAEFVQPPQSIARPVGTTAIFTCQVQGEPEPQLTWLKNGQILEP
GGHVKLRNNNSTLTIYSISQEDEAIYQCIAENSAGSTQASARLTVLWADGLPGEPTQVQA
EALSPTTIQVSWKEPDQNTQDIIGYVLHIRKTSDPLEMEYEEAVSKVTLQQVIRDLEPST
SYTFYVKAYTSHGASKPSESVAESTHGEVPAPPSLFTKVLNSSVVQVTWESSSKMGQHQG
FRLYYRRAHTPLFIGPIHFLRNITQYNITQLDSSMVYEIKLLAYNQHGDGNATTRFISLR
EALEKSVLDGSCDCVKDEQSKTSTTGIIIGIHIGVTCIVFCVLFLVFSYRGRLMMCKTVQ
ATPQAGHSAVLESSSSSQGASGLNGAARREMEVNGSAAGKKVVDSNELERLFTQPNTQDA
CMSNSYILNNTQLSTIPLDEFVEERETPFQEHSSVTAAQPDQG
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcatccacacggcgccaatgccttgtttcgtgctctttgggaatccttctaaatgct
ttaatcggtgtagttttgggagctgaactctctttcaagctggagcccagcgacatcatt
gctgttcaggagcagccgcttttgctccactgccaggtggacggcatcccacccatcacc
acgcagtggaggcgcaatggcctgctcctagctcaggaccgccatcacgccaccttcatc
aacggctcacttttgatcatccacttccaaaagaccaagcccgacggctcgtctgatgaa
ggcgactatgagtgcatggcccagaactcgtttgggcgagtggtgagccgcaaagcccga
atccaggcagccactatggcagacttccatgtgcagccagagtcggtgcatgctgaagag
tctggcgtggctcgattccagtgccagatccatggtctgccagagccgcttattagctgg
gaaaaagacagacgcccggtggatactacaaatgagagatatacactgctaccaacaggt
gttctgcaaatcacaggagtgcgtgaagaggacagcggaaagttctgctgtgtggcacat
aacagtgctggagtaaaacacagtgcagaggctctcctaactgtttcaggctctcagtcg
tctgtttacaaagagcccatgattctggtcggcccggagaatcttaccctcactgttcac
cagaccgccatcctggagtgtgttgccacaggatatcctcgccccattgtgtcttggagc
agattagatggccgtcccatcggagtggagggaattcaggtgcttggaacaggaaacctg
atgatctcagatgttggtgtgcagcactctggcatttatgtttgtgctgctaacaaacca
gggacgcgcgttcgcaggacagctcaaggacgactggtagtccaagctccagcagagttt
gttcagcctccgcagtccattgctcgaccagttggcaccacggcgatcttcacctgccaa
gtgcagggtgagcctgagcctcagctcacctggctgaagaacgggcagattctggagcca
ggggggcatgttaaactcaggaacaacaacagcaccctgacgatctacagcatcagccag
gaggatgaggccatctaccagtgcattgctgagaacagcgctggctccactcaggccagt
gctcggctcaccgtgctatgggcggatggactgcctggtgagcccacccaggtgcaggcc
gaggccctctcccccaccaccattcaggtatcctggaaggagcccgaccagaacacgcag
gacatcatcggatatgtgctccacattcgcaagacatcagacccgctggaaatggagtat
gaggaggcggtcagtaaggtgacactgcagcaggtcatccgtgacctggagccctccacc
agttacactttctacgttaaggcttacacatcccacggagccagcaaaccctcagagagt
gttgcagagagcactcacggcgaggttcccgctcctccttcccttttcaccaaagtgttg
aacagcagcgttgtacaagtaacgtgggaatcttcctccaagatgggccaacatcaaggc
ttcagactctactacaggagagcacacacaccactgttcattggtcccatccactttctt
cgcaacatcactcagtacaacatcactcaactcgattcttctatggtttatgagataaag
cttcttgcatacaaccagcacggagatgggaatgccaccactagattcatttcacttcgc
gaggcactggaaaaatctgtgctggatggctcatgtgactgtgtgaaagacgaacagagc
aaaacctccaccaccggcatcataattggaatccacatcggtgtgacttgcatcgtcttc
tgcgtgctcttcctcgtgttcagctaccgcggcaggctaatgatgtgtaagacagttcag
gccaccccccaggcagggcacagcgcagtcctggaatcctcttcctcttctcagggggct
tctgggctcaacggggctgccaggagagagatggaggtcaatggcagcgctgcagggaag
aaagtggtcgacagcaacgagctcgagagactcttcactcagcccaacacacaggatgcc
tgcatgtcaaactcctacattctgaacaacacccagctgtcaacgatacctttggatgag
tttgtagaggagagggagacgccgtttcaggagcattcttcagtcactgcggctcagccg
gaccaaggctaa
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