Xiphophorus couchianus (Monterrey platyfish): 114143892
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Entry
114143892 CDS
T05908
Symbol
ubr5
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114143892 (ubr5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114143892 (ubr5)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114143892 (ubr5)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
HECT type E3
114143892 (ubr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
114143892
NCBI-ProteinID:
XP_027872075
LinkDB
All DBs
Position
5:complement(23541768..23591312)
Genome browser
AA seq
2842 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYSYNSHPHLSLLEQATLKQCVVGPNHAGF
LLEDGRVCRISFAVQPDRLELSKPDGGDGSKLSSGSGTGRSSRPGRTSDPPWFLSGSDTL
GRLAGNTLGSRWSSGVNGGSGGGGSGGGAGGGGGAGGGSSGGSGGGGGGSGGGGSGGGNT
SGRSSTAARDSRRQTRVIRTGRDRGSGLLGSQPQPVIPASVIPEELITQAQVVLQGKSRS
VIIRELQRTNLDVNLAVNNLLSRDDEDGDDGDDTASESYLPGEDLMSLLDADIHSAHPSV
IIDADAMFSEDISYFGYPSFRRSSLSRLGSSRVLLLPLERDSELLRERESVLRLRERRWL
DGASFDTERGSTSREGEPSLDKKSIPVQSPVSLGEELQWWPDKDGVKFVSIGALFSELVA
VSSKGELYQWKWSEPEPYRNAQNPSIHHPRVSFLGLVNEKITLLAANSIRATVATESNKV
ATWVDDTLSTVASKLEHSAQSFPELQGERMVSLHSCALYTCAQMENSLYWWGVVPFSQRK
KMLEKARAKNKKPKSSAGISSIPNITVGTQVCLRNNPLYHAGAVAFSVSAGIPKVGVLLE
SVWNMNDSCRFQLRSPESLKNMEKTTKTQEIKMESKPELVKTEMGPPPSPASTCSDTSSI
ASSASLPYKRRRSTPAPKEEEKVNEEQWPLREVVFVEDVKNVPVGKVLKVDGAYVAVKFP
GTSSSMTNQSSAPPPDSDPSSLLQDCRLLRIDELQVVKTGGTPKVPDCFQRTPKKLCIPE
KAVILAVNVDSKGVHAVLKTGNWVRYCIFDLATGKAEQENNFPTSNLAFLGQSECNVAIF
TAGQESPIILRDGNGTIYPMAKDCMGGIRDPDWLDLPPINSLGMGVHSLVNLPSNSTIKK
KAAIIIMAVEKQTLMQHVLRCDYEACRQYLMNLEQAFLLDEGGQGLGALLGHRCDGNRNI
FHAAVSVCFPVSNKETKEEEEAERSERNTFAERLSAVEAIANAISVVSSNSSGNRTGSSS
SRGLRLREMMRRSLRAAGLGRHESGPSSGDHQDPVSPPIAPSSWVPDPPPMDPDGDIDFI
LAPAVGSLTTASSGSNQGPSTSTIPGPSTETSVVESKDRKANAHLILKLMCDSVVLRPHL
WELLSAKDARGMTPFMLAVSGRAYPAAITVLEAAQKIAKMADPEKDDADSMFMEMICPVG
TNPDDSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGHDCK
LKRTSPTAYCDCWEKCKCKTLIAGQKAARLDLLYRLLTTTNLVTTPNSRGEHILLFLVQT
VARQSVEHCQYRPPRIREDRNRKAANAEDSDMPDHDLEPPRFAQLALERVLQDWNALKSM
ILFGSQENKDPLSASSRIAHLLPEEQVYLNQQSGTIRLDCFTHCLIVKCAPDITFIDTLL
GTLIKELQNKYTPGRREEAVAVTRRFLRSVARVFVILSVEMASSKKKNNFIPQPIGKCRR
VFQALLPYAVEELCNVAESLIVPVRMGIARPTAPFTLASTSIDAVQGSEELFSVEPLPPR
SSPDQSSSSIQTVASYIIRNPQPRRSSQSQPVRGRDEEQDDIVSADVEEVEVVEGVAGEE
DHHDDQEEQGEENAEAEGQHDEHDEDGSDMELDLLAAAETESDSESNHSNQDNASGRRSV
VTAATAGSEAGASSVPAFFSEDDSQSNDSSDSDSSSSQSEDVDQETFLLDEPLERTTSAS
HANTAAQAPRSMQWAVRNTPSQRASGSGSGPSASSTPAASSTGLIYIDPTNLRRSSAISS
SAAAAAAALEASNTSSYLTSASSLARAYSIVIRQISDLMSLIPKYNHLVYSQYPAAVKLS
YQDAVNLQNYVEEKLIPTWNWMVSIMDSTEAQLRYGSALSSAGDPGHPSHPLHASQHSAR
RERMTAREEASLRTLEGRRRAATLLTARQGMMSARGDFLNYALSLMRSHNDEHSDVLPVL
DVCSLKHVAYVFQALIYWIKAMNQQTTLDTPQMERKRNREILELGLDNEDSEHENDEDTN
QSSTLQDKDEDSVPAETGQNHPFFRRSDSMTFLGCIPPNPFDIPLAEAIPLADQPHLLQP
NARKEDLFGRPSQGLYASSYMTTKGLAETSMDRNCLEILPTKMSYTANLKNVMSMESGQR
SMGNQTLGEQEMETSKAGPSPRDLAAQLKSSLLAEIGLTESDGPPLPSFRPQCSFMGMMI
SHDMLLGRWRLSLELFGRVFMEDVGAEPGSILTELGGFEVKESKFRREMEKLRNLQSRDL
ALEVDRDRDQLIQQTMRQLNGHFGRRCTTTPMAVHRVKVTFKDEPGEGSGVARSFYTAIA
LALLSNDKLPNLDCVQSVSKGMQASSTCHHDYNSNLMQRLRNRDRERERRSGGLRAGSRR
DRDRDSRRQLSIDTRPFRPSSEGNPSDEPDPLPAHRQALGERLYPRVHAMQPAFASKITG
MLLELSPAQLLLLLASEDSLRARVEEAMELLIAHGRENGADSILDLGLPEASEKAQQQDN
RKRHGSTRSVVDMELDDPDDGDDNAPLFYQPGKRGFYSPRPGKNTEARLNCFRNIGRILG
LCLLQNELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMYESLRQLIRHSQTGEADAVFAA
MDLAFAIDLCKEEGVGQVELLSGGVNMPVTPHNVYEYVRKYAEHRMLVVAEQPLHAMRKG
LLDVLPKNALEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESGENADKLLQFKRWFWSI
VEKMSMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDDQHLPTANTCISRLYVPLY
SSKQILKQKLLLAIKTKNFGFV
NT seq
8529 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattcacttcgttgttcacccgttgccggggaccgaggatcagctcaatgac
aggcttcgggaagtctcagagaaactcaataaatacagctacaacagtcacccacatctt
agtctgctggagcaggccaccctaaagcagtgtgttgttggtccgaaccacgctgggttt
ctcctggaggatggacgggtttgcagaatcagcttcgctgttcagcccgatcgcctggag
ctcagcaaaccggatggcggcgatggttcaaagttgagcagtggttcagggacaggaagg
agctccaggccaggcaggaccagtgatccaccctggttcctgtctggttctgacacactg
ggcagactggcaggcaacacccttgggagtcgctggagctccggggtgaacggaggcagc
ggaggaggtgggagcggaggaggagcaggaggcggtggcggagcaggaggcggtagcagt
ggcggaagtggaggtggaggaggagggagcggaggaggagggagcggaggtgggaatacg
tcaggcaggtcatcaacggcggctcgagattcccgccgccagaccagagtgatccgcacg
gggagggaccgtggctctgggcttctaggcagccagccacagccggtcatcccagcatca
gtcattccagaagagctcattacccaggcccaggttgtcctacaggggaagtcaagaagc
gtcatcatcagggagctccaacggactaaccttgacgtcaacctcgctgtcaacaacttg
ctgagtcgcgacgacgaagacggagatgatggagacgacacggccagcgagtcctatctc
ccaggagaagacttgatgtccctgttggacgcggacatccactcggctcatcccagcgtc
atcatcgacgccgacgccatgttctccgaggacatcagctactttggctacccgtctttc
agacgctcctcgctgtcacggctgggatcctccagagttctccttcttcccttagagcgt
gactcagagctgttgcgcgagcgtgagtctgtgctgaggttgcgagagcgccggtggctc
gacggggcgtcgtttgacacggagcggggttcgacgagccgcgagggcgagcccagcctc
gacaagaagagcatccccgtccagagccccgtgtcgctgggagaggagctgcagtggtgg
cccgacaaggacggtgtgaagtttgtgagcattggagcgttgttctcagagctggtggcg
gtgagctccaaaggagagctttatcagtggaagtggagcgagcctgaaccatacaggaat
gcacagaatccctccattcaccaccctcgtgtttccttcctgggcctggttaatgagaag
atcacgttactggctgctaatagcatcagagctactgtagcaacagagagcaacaaggtg
gccacctgggtggatgacacactaagcacagtggcctctaagctggagcacagtgcccag
tctttcccagagctgcagggggaacgcatggtgtcgctgcactcatgtgcactttacaca
tgtgcacagatggagaacagcctctactggtggggtgttgtgccttttagtcaaaggaag
aaaatgcttgagaaagcgagagccaagaacaaaaagccaaagtccagtgctggcatctcc
tcaatacccaacatcactgtgggaacacaggtgtgtttgaggaataatcccctctaccat
gccggtgcagtggccttttctgtcagtgccggaatccccaaagtgggcgtcctgttggag
tctgtctggaacatgaacgacagctgcaggttccagctgcgctcaccggagagcctcaaa
aacatggagaagaccacaaagacccaggaaatcaagatggaaagtaagcctgagctggtg
aagactgagatgggtcctcctccatcccctgcatccacctgtagtgatacctcttccatt
gctagcagtgcctcactgccctacaagcgcagacgttcgaccccagctcctaaggaggaa
gagaaggtgaacgaggagcagtggcctctcagggaggtggtgtttgtggaagacgtaaaa
aacgttcccgttgggaaggtgctgaaggttgatggtgcgtacgttgctgtgaagttcccc
ggaacatcaagtagcatgacaaaccaaagcagcgctcctcctccagactcggatccatcc
tcactgttacaggactgcaggctcctcaggatagatgaactgcaggtggtcaaaaccggt
ggaaccccgaaggttcccgattgctttcagcgaacgcctaaaaagctttgcatcccagag
aaggccgtaatcctggctgtaaatgttgactccaaaggagtccatgcagttctgaagacc
ggtaactgggtaaggtactgcatctttgacctggccacaggcaaagctgagcaggagaat
aactttcctacaagcaacctggccttcctgggccagagcgagtgcaatgtggccatcttc
actgcagggcaggagtctcccatcatcctccgggacgggaatggtacaatctatcccatg
gctaaagactgcatggggggaatccgggaccctgattggttggacctgcctcctattaac
agcctgggaatgggggtgcactctctggtcaacctgccatctaactccaccattaaaaag
aaagctgctatcattattatggctgtcgagaaacagacgctgatgcagcacgtcctgcgc
tgcgactacgaggcgtgccggcagtacctgatgaacctggagcaggccttcctcctggac
gagggcggccagggcctcggggcgctgctgggccatcgctgcgacggaaaccgcaacatt
ttccacgccgccgtctccgtctgcttccctgttagcaacaaagagaccaaagaggaagaa
gaagccgaaaggtcagagagaaacacatttgcagagcgtctgtctgctgtggaggccatc
gccaacgccatctctgtggtgtcgagcaacagctctggaaacaggactggctcctccagt
agcagagggcttcgtctaagggagatgatgcggaggtctcttagagcagcaggtctcggc
cgccacgagtctgggccgtcctccggtgaccaccaggaccccgtgtccccacccatcgcc
ccgtcaagttgggtcccagaccctccgcctatggaccctgatggtgacattgatttcatt
ctcgcaccagcagttggttcactcaccacagcttcctctggttctaaccagggccccagc
acttccaccataccaggaccgtcaacagagacatcagtggtggagtctaaagacaggaag
gccaacgctcacctcatcctgaagctgatgtgtgacagcgtcgttttgaggccacaccta
tgggaactgctctctgcaaaggatgccagaggaatgacccccttcatgctggctgtcagt
ggaagagcctacccagctgctatcactgtgcttgaggccgctcaaaaaatagccaagatg
gccgacccggagaaagacgatgcggattctatgttcatggagatgatttgtcctgtggga
accaacccagatgattctccgctttatgtcctctgctgcaacgacacctgcagtttcact
tggaccggagcagagcacattaaccaggacatatttgagtgtcgaacatgtggcctgctt
gagtcgctctgctgctgcacggagtgtgctagagtgtgtcacaaaggacacgactgcaag
ttgaaaaggacttcccctacagcttactgtgactgttgggagaaatgcaagtgcaaaaca
ctgatagctggccagaaggctgcccgcctggatttactctacaggctgctaacgacaaca
aacctggtcactacaccaaacagcaggggggagcatatattactgttcctggttcagact
gtagccaggcaaagtgttgagcactgtcagtaccgaccgcctcgcatcagagaagaccgg
aaccgtaaggctgctaatgcagaggactctgatatgccagaccacgatctggaacctcct
cgctttgctcagctggccttggagagagtcctacaggactggaacgccctcaaatctatg
atcctgtttggttctcaggaaaacaaagatccacttagtgccagcagcagaattgctcac
ctcctgcctgaagaacaggtgtacttgaaccagcagagcggcaccattcgcctcgactgt
ttcacacactgcctcattgtcaagtgtgctcctgacatcacctttattgacactctactg
gggactctgataaaggagctgcagaacaaatacacgccgggcaggagagaggaggcggtg
gccgtcactagaaggttcctgcgctccgtcgcgcgtgtgtttgtcatcctcagcgtagag
atggcttcctccaagaagaaaaacaacttcatcccgcagcccatcgggaagtgtcggcgt
gttttccaggctctgctgccgtacgcggtggaggagctgtgcaacgtcgcggagtccctc
atcgtcccggtcaggatgggaatagcgaggcccacggctccgttcacgctggccagcacc
agcatagacgcagttcagggcagcgaggagcttttctccgtggagccgcttcctcccagg
tcgtcgccggaccagtccagcagctccatccaaacagttgcttcttacatcataaggaac
cctcagcccagacggagcagccagtctcagcccgtcaggggacgggacgaggagcaggac
gacatcgtgtcagccgatgtggaagaggttgaagttgtagagggtgtagctggcgaggaa
gaccatcatgatgaccaggaggagcagggagaggaaaatgctgaagctgaaggtcaacat
gacgagcacgatgaagatggaagtgacatggagttggacttgctggcagccgccgaaacg
gagagcgacagcgaaagcaaccacagcaatcaggacaacgccagtggtcgcagaagcgtc
gtcacggcagcaactgccggctctgaagcaggtgctagcagtgtccctgccttcttttca
gaggacgactctcagtcaaacgactcgagcgactcggacagcagcagcagtcagagcgaa
gacgtcgaccaggagacgttcctgctggacgagccgctggaaaggacgacgagcgcctca
cacgccaacactgccgcccaggctccccgctccatgcagtgggccgttaggaacaccccg
agccagagggcgagcggcagcggcagcggcccctccgcctcctcaacacctgctgcgagc
tctaccggcttgatatacatcgacccgacaaacctgcggcgctccagcgcaatcagctcc
agtgcagcggcggcggctgcagcgctggaagccagcaataccagcagctacctgacttcg
gccagcagtttggcccgcgcctacagcatcgtcatcaggcagatttctgacctcatgagt
ctgattcccaagtacaatcatctcgtctactcgcagtatcctgcagctgtcaagctctcc
taccaggacgcagtcaacctgcagaattatgtggaggaaaagctgattcccacctggaac
tggatggtgtccatcatggactccaccgaggcccagctgcggtatggctcggctctgtcg
tctgccggagaccccggccaccccagccacccgcttcacgcctcgcagcactcggctcgc
cgcgagcgcatgacggcccgggaggaggccagcctccgcactctggaaggacggaggaga
gcagccacactgttgacggctcgccagggcatgatgtcggcacggggagacttcttgaac
tacgccctgtctctgatgcgctcccacaacgacgagcattcagacgtgcttcctgttctg
gacgtgtgctcactgaaacatgtggcctacgtgttccaggccctcatttactggataaag
gccatgaatcagcagaccaccctggacacgccacagatggaaagaaaaaggaatcgagag
attctggagctcggtttggacaatgaggattctgagcacgagaacgacgaagacaccaat
caaagttcgaccctgcaggacaaggacgaggactcggttcccgcggaaacaggtcaaaac
cacccgttcttcaggcgctcggattcgatgaccttcctgggctgcatccctcccaacccc
ttcgacattcccctggccgaggccatcccactggcagaccagcctcacctactgcagcca
aacgccagaaaggaggatctgtttgggcgtccctctcagggcttgtacgcttcgtcttac
atgacaaccaaaggcctggctgagacgagcatggacaggaactgcttggagatcctgcct
acaaagatgtcgtacaccgccaacctaaaaaacgtcatgagtatggaaagcggccagcgg
agcatggggaaccagacgctgggcgagcaggagatggagacttcgaaagcgggtccgtct
ccccgtgacctcgccgcccagctgaagagcagcctcctggctgagatcggcctcacagag
agcgacgggcctcctctcccgtcattcagaccgcagtgcagtttcatggggatgatgatt
tcacacgacatgctgctcggccggtggcgcctgtcactggagctcttcggtcgcgtcttc
atggaggatgtgggagctgagcctggatcaatcctgacggagttgggcggattcgaggtg
aaggagtccaagttccggcgggagatggagaagctgaggaacctccagtctcgagacctg
gcgctggaggtggaccgcgaccgcgaccagctgatacagcagaccatgcgccagctcaac
ggccacttcggcaggcggtgcaccaccacacccatggccgtgcaccgggtcaaggtcacg
ttcaaggacgagcccggggagggcagcggcgtggctcgcagcttctacacggccattgcg
ctggcgctgctctccaacgacaagctgcccaacctggactgcgttcagagtgtcagcaag
ggcatgcaggccagcagtacgtgtcatcacgattacaattcaaatctgatgcaaaggttg
agaaacagagatcgggagcgagagcggagaagtggagggcttcgagcgggatctcggaga
gaccgagacagggactccagaaggcagctgtcgatagacacccggccgttcaggccttcc
tctgagggaaaccccagcgacgagcctgaccccctgcctgcacacagacaggcgcttggt
gaacggctataccctcgagttcacgcaatgcaaccggcgtttgccagtaaaattaccggc
atgctgctggagctttctcctgctcagctgctgctgctgctggccagcgaggattccctg
agggcccgggtggaggaagccatggagcttctcattgcacatggaagggaaaatggtgct
gacagcatcctggacctgggcctccctgaagcctctgaaaaagcacagcagcaggataac
cggaagcgccacggatcaacgcgcagcgtcgtcgacatggaactggacgatccggacgat
ggcgacgacaacgcccccctcttctaccagcccggcaagcggggcttttactccccccgg
ccgggcaaaaacacagaggccagactcaactgcttcaggaacatcggcagaatattgggg
ctctgcttgctgcagaatgaactctgtccaatcacgctgaacagacacgtgatcaaagtg
ttgctcggtagaaaggtgaattggcacgactttgcgttctttgacccggtcatgtacgag
agcttacggcagctgatccgccattcgcagacgggagaagcagacgctgtgtttgctgcc
atggatctggccttcgctattgacctctgcaaggaggaaggggtgggacaggttgagctg
ctgtcgggcggggtcaacatgccggtaactccacacaacgtttacgagtatgtgaggaag
tacgcggagcacaggatgctggtggtggccgagcagccgctccacgcgatgaggaaaggt
ttgctggacgttcttcctaaaaacgccctggaggatttgacggctgaagacttccggctg
ctggttaacggctgtggagaagtcaacgttcagatgctcatcagcttcacttcgttcaac
gatgaatcaggggaaaatgcagataaactactccagtttaaacgatggttttggtccata
gtagaaaagatgagtatgactgagaggcaagatttggtgtacttctggacgtccagcccc
tctctgccagccagcgaggaaggcttccagccaatgccctccattaccatccggcctcca
gacgaccagcacctccccaccgccaacacctgcatctcacgtctctacgtgccactatat
tcctctaaacagatccttaaacaaaaactcctgctagcaattaaaaccaagaattttggt
tttgtgtag
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integrated database retrieval system
