Xiphophorus couchianus (Monterrey platyfish): 114143937
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Entry
114143937 CDS
T05908
Symbol
tmc5
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xco02000
]
114143937 (tmc5)
03037 Cilium and associated proteins [BR:
xco03037
]
114143937 (tmc5)
Transporters [BR:
xco02000
]
Other transporters
Pores ion channels [TC:
1
]
114143937 (tmc5)
Cilium and associated proteins [BR:
xco03037
]
Other cilia and associated proteins
Stereociliary proteins
114143937 (tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
114143937
NCBI-ProteinID:
XP_027872154
LinkDB
All DBs
Position
5:28627582..28639279
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AA seq
973 aa
AA seq
DB search
MTSYSNGGVFNPAYHDSETLEIDRRSSRKHQHTNPYARVDPAQWGHNVEPGNNGEWGAAG
DGWTGRENVPMGLISTRLGSPPLQHNPNNNTSQIDPDSQYDRLPPVQLHSSISGNMTMRW
RGVTMRRMSMFPNADPAHAAFTEDAIKSEMENEEQNLIKELVALSTTEQIRKIRELPVSF
EEKKHVRTQVTAFKSAGQYHHFTSLTDFSQNMSLSMRRFGYSIKSARQTLQLWQGIMKEI
GGKFGSSVLNYFVLLKWLLLFNIFSFLVNFGFITIPLLVYDLSLNVSPNVSFRGLELLTG
AGYFNYTIMYYGSYSNETIRGLVDYDMQLAYFFTISVYMVLCGLVLIFSMASSFKKNYAL
ADPASNSAWQLLCSWDFSITNEKAVNQRKNNLRIQLKESLSEKAHRERQTTSEQLKQYGI
YFGSWLLSTGLAAGCGASIFYLCHYEDEQAEDTETWSALKEAETLLVPFVVSLMNMVIPL
FFSLFNKFEQYSSQRKQIYALLFRNVLLRISILGVLCYYWMNTVPQKFTCWEPMVGQALY
RLVIVDFIFLMLGSLFGEFLSNVIGTKIQPRLGVPEFDVARNVLEIIYAQTLAWIGIYFS
PLLPVIQILKFFILFYLKKVSLTHNCQPPRRSGRAAQMKTIFIFLLFFPFFVGALSIVAY
TSWRLTPSEQCGPFRGLNSTFSVTGEWIDHVNNNSSNHWVGWIYQNVIRSEIFYFLSTLI
ILVIIYIFWQLIQGRKQLIVLLRRQIINEGKDKSFLLEKLQNLQKSCPEVNKKHKKRTTH
TSRRSAERSSGSQSNSNAMVQVLLARQQLEEEERSRASGVSVPSDISTSDAVTQAMLARQ
KAERQHENVYEITDGRPPSLDAVAQSLAARQRAEDRDEYWSTTHFNQSNPVNSSIIQVRQ
SAERDREDDSHDASSPVSSVMIQVMQARQKAEEEERNQRIHPPGQNPAPPGSSALIQAML
ARQQAQNEYDDGY
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgacgagttacagtaatggtggagttttcaacccagcctaccatgacagtgaaactctg
gaaattgacaggaggtcttccaggaaacaccagcataccaatccgtatgcgagagtagac
ccagcccagtgggggcataatgttgagcccggaaataatggtgagtggggagcagccggg
gatggttggactgggagagaaaacgtccccatggggctcatctccacacgcctgggaagt
cctccgttgcagcataaccccaataacaacacaagtcagattgacccagattctcagtat
gaccgcctaccacctgttcaacttcattcttcaatttcaggcaacatgacaatgagatgg
agaggagtaacaatgagacggatgagtatgtttcctaatgctgatcctgcccatgcggct
ttcacagaagatgccatcaagagcgagatggaaaatgaggaacaaaacctcatcaaggag
cttgttgccctgtcgacaacggagcaaatcaggaagatccgggagctgcctgtgagcttt
gaagagaagaaacacgtcaggacccaagtaacggcattcaagtctgcaggacagtaccat
cacttcacatctttaacagatttttctcaaaatatgtcactgtcaatgcgaaggtttggt
tacagtataaaatccgccaggcagaccctgcagctttggcaaggcatcatgaaggagatt
gggggcaaatttggctccagcgttctcaactattttgtgcttctaaagtggcttctcttg
ttcaacattttctccttcctggtcaactttggcttcattaccatcccgctcctggtttat
gacctttcactcaacgtatccccaaatgtgagcttcagaggtctggagttactcaccgga
gctggttatttcaactacaccatcatgtactacgggagctacagcaatgaaacaattagg
ggcctggtggattacgacatgcagctcgcctatttctttaccatctcggtctacatggtg
ctgtgtggactcgtgctcattttcagcatggcgagctcatttaaaaaaaactatgccctg
gcagacccagcttcaaacagtgcatggcagcttttgtgcagctgggatttcagcataacc
aacgagaaagcagtgaaccagcgtaagaacaaccttcgaatccagctgaaggagtcttta
tcagaaaaggcacacagggagcgacaaacaacttctgaacaactgaagcagtatgggatt
tattttggttcctggctcctctccactggtctagctgctggctgtggagctagcatcttt
tatctctgccattacgaagatgagcaggctgaagacaccgaaacatggtccgcactgaag
gaagcagagacactcctggttccctttgtagtgtctttgatgaatatggtcattcccctc
ttcttctccctcttcaacaagtttgagcagtactccagccagcgcaaacaaatttatgcc
ttgttgttcagaaatgtgttactccggatatccattttgggtgttttgtgctattactgg
atgaatacagtgcctcagaaattcacatgctgggagcccatggttggacaggctttgtac
cgtttggtcattgtcgatttcatttttctgatgctgggatccttgtttggagagtttctt
agcaatgtgattgggaccaagatacaaccacgtttaggagtaccagagttcgatgtagcc
agaaatgtcctggaaatcatttatgctcagactctggcctggattggaatctacttctct
cctctgttacctgtgatccagattctcaagttcttcatcttgttttacttgaaaaaggtc
agtttgactcacaattgtcagcctccacggcgttcaggcagggcggctcagatgaaaacc
atcttcatctttctcctgttctttcctttctttgtgggagccctgtctatcgttgcgtac
acctcctggaggctgaccccttcggagcagtgtggccctttccggggcctcaacagcacg
ttcagtgtgactggagagtggatagatcacgtgaacaataattctagtaatcattgggtt
gggtggatctaccaaaatgtcatcaggagtgaaattttctactttcttagcacactcatc
atccttgtcatcatatacatcttctggcagctcattcagggccgaaagcagctcattgtt
cttctgagaaggcagattattaatgaggggaaagacaagtccttcctgttagaaaagctg
cagaacctgcagaaatcctgtccggaagttaacaaaaaacacaaaaaacggacaactcat
acaagtcgacgttcagctgagcgctcctctggaagtcagtccaactcaaacgcaatggtt
caggttctacttgctcgccagcagctggaagaggaggagagaagccgtgccagtggcgtt
tcagtcccgtcggacatttccacctccgacgccgtgacgcaggccatgctggcccgccag
aaagctgagagacaacatgaaaacgtctacgaaatcaccgacggacgccctccttccctc
gatgcggtggcgcagagcttagcagccagacagagggctgaagacagggatgaatactgg
agcacaacccactttaaccaaagtaacccagttaacagttccattatccaagtcagacaa
agtgctgaaagggacagagaagatgattcacatgatgcttcatcccccgtatcaagtgta
atgattcaagtcatgcaagccaggcagaaagcagaggaagaggaaaggaatcagaggatc
catcctccagggcaaaacccggctcctcccggctccagcgctctcatccaggccatgttg
gcccggcaacaggcccagaatgaatatgatgatggttattga
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