Xiphophorus couchianus (Monterrey platyfish): 114143956
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Entry
114143956 CDS
T05908
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
114143956
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xco02000
]
114143956
Transporters [BR:
xco02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
114143956
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
114143956
NCBI-ProteinID:
XP_027872168
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Position
5:18556346..18570252
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AA seq
560 aa
AA seq
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MALNIPGVVAVVLFYILILGTGVWAARKSRRAERKSSGDRTEVVLLGDRNISLVVGIFTM
TATWVGGGFILGVAEAVYTPKMGLIWALMPIQYSVSFIIGGLFFAKPMREKKYVTMMDPF
QEKYGRVLSGALVLPCILVDVLWVSCTLLGLGATMSVILDLHFGYSVWISAAVAIIYTLL
GGLYSVAYTDIIQLALTFFSLWLCVPFLLLNKTSVNIAETAFNHTIQEPWVGSLDKDRVW
KWIDDWLMLGLGSLSFQCFHQRTLSASSSSTAQLTCFVAAFLIAILGIPPALVGAVAAST
DWNLTQYGSPPPYLRGEHSFVLPLTLQYLTPSYISIIGIGAVAAAVMSSTDSALLSATSV
FSANIYKNIFRTQASDNEMQWVIRASVVVVGLVGTSITFCTNSTLLLWILGADVSYTLLF
PHLVSVLFLRVTNGYGATVGYIVGVTVRILLGENTLGIPVVLHLPGCTLEDGIYVQKSPV
RTVSMLCTLVTILIFSWLAVVMFNHSLLPEKWDVFKVRRIVTEPPEDGVAQNLKDEAGND
DESDENSHGVALQPLSQTEI
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggctcttaacatccccggtgtggttgcggtggtgctgttctacatcctgatcctgggc
acgggagtttgggccgcccgaaagtccaggagagccgagaggaagagcagtggagacagg
actgaggtggtgctgcttggagacaggaatatcagcctggtggttggaatattcaccatg
acagccacgtgggttggaggaggttttatcctgggtgttgctgaagctgtgtacactccc
aaaatgggcttgatttgggctctgatgccgatacaatactcagtttccttcattataggt
ggtcttttctttgccaagccaatgagggaaaagaaatatgtcaccatgatggaccctttc
caggaaaagtatggcagagtgctgagtggggctctcgtgctgccatgcatattggtggat
gtgctctgggtctcctgcactctgttaggactgggagcgactatgagcgtgatactggac
ttacactttggctactctgtgtggatctcagcagcagtggctatcatctacactctgttg
ggaggtctttattcagtagcctacactgacatcatccagctcgccctcacattcttcagt
ctgtggctgtgtgtaccctttctcctactgaacaaaacatctgttaacattgctgagacg
gctttcaaccacacaattcaagagccatgggttggaagtctggataaagatagagtctgg
aagtggatcgatgactggttaatgctgggacttggtagtctttcattccaatgcttccac
cagaggacgctgtcggcatcttcatcaagcacagcccagttaacctgctttgtagcagca
ttcctgattgccattctaggaatccctcctgctctggtgggggctgtggctgcctccaca
gactggaacttgactcagtacggctctccgcctccttacctccgcggggagcacagtttc
gtcctgcctctcacgctgcagtacctcactccgtcctacatatccatcattggaatcgga
gccgtggccgctgccgtcatgtcttccacagattcggctctgttatctgcaacttctgtt
ttctccgcaaacatctacaaaaacatcttccgtacacaggcctcagacaatgaaatgcag
tgggtgattcgggcatcagtggtagttgtgggtcttgttggaacatcaataacgttctgc
accaacagcaccctgctcctctggattcttggagcagacgtttcctataccctcttgttc
ccccatttggtttctgtccttttcctcagagtgaccaatggttatggcgccaccgtgggt
tacattgtgggggtgactgtgaggattttgttgggagaaaacactttgggcattcctgtt
gttcttcaccttccaggttgcactcttgaagacggcatctatgtccagaagtctcctgtt
aggacagtgtccatgctgtgcaccttggtaaccatattgattttttcttggttggctgtg
gtcatgtttaaccacagcttgctgcctgaaaaatgggacgttttcaaagttagacgtatt
gtcactgaaccaccagaggacggtgttgcgcaaaacctgaaagacgaagcaggaaatgat
gatgaaagtgatgagaacagccatggagtggctttacagccattgtcgcaaactgaaata
taa
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