Xiphophorus couchianus (Monterrey platyfish): 114144073
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Entry
114144073 CDS
T05908
Symbol
prdm13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114144073 (prdm13)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
114144073 (prdm13)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_7th_ZNF462
ADK_lid
zf-BED
zf-C2H2_15
Zf-C2H2_ZNF451
GPS2_interact
Motif
Other DBs
NCBI-GeneID:
114144073
NCBI-ProteinID:
XP_027872340
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Position
5:24907731..24914279
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AA seq
637 aa
AA seq
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MVLISPRAMQATRASTTVSVFADCSVPAGLRIGPVPGVFKLGKYLSDRKDVGPKKKMRLL
RGEFVDESGCPVPDWIGFIRAARNSQEQNLEAVSDLPGGQIFYRVLREIPAGEELSVWYS
NPLAQWYDIPTTATPTHDEKGEERYICWYCWRIFKYPNTLKAHVHFHCALSNGRGFVSGE
QARGTESFSRSPKSGDIPNTSGHSNSSDSNRRAVSASPFPSNKGGLSKKSSAEEQDRALD
MSVASARSQGHLLGLGAASSVLGSMGFHPGVRSAFKPTGVSKVPGAEASREEAGGKLSGL
GFSKLIGNMKPIRNLGEALNGAGSHPPKFASTIVDSTSPMVQCGNPIRGFPLLPHVEETS
AFKHVESRIHTGLSPSRYPQMPPGLHFERFSLPHFDGVKTYGGDCNIPLMPFTVYNGELL
YSSPYYPLKFHFSNLLKYPDSVPYFGAPQLSQDLGSITNIDREIAMHTQQLSEISSDKSR
ARLDSVPAGSTGSTGSGKPKKGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCFRPF
GDPSNLNKHIRLHAEGNTPYRCDFCGKVLVRRRDLERHVKSRHPGQTLKKLDDKPGGPFD
DADHKSDNDSDVDVCFTDDQSDQESSKNNDLVLSETI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggttctgatctcaccccgcgccatgcaagccacccgggcgtccaccaccgtcagtgtg
tttgcggactgcagcgtcccggccgggctccggatagggccggtaccgggcgtcttcaag
ctggggaagtacctgtcggaccgcaaggacgtcggaccgaaaaaaaaaatgcgtttgctg
cgcggagagttcgtggacgagtcgggctgtcctgtgcccgattggatcggattcatccgc
gccgccaggaacagccaggagcaaaacctggaggcggtgtcggacttacctggcggacag
attttctaccgagtcctgagagaaatcccagcgggagaggagctgagtgtgtggtactcc
aaccctctcgcccagtggtacgacatccccaccacggccactcccacgcacgacgaaaaa
ggtgaggagcgttacatctgctggtactgctggagaatattcaaataccccaacaccctc
aaggcccacgtccacttccactgcgctctgagcaacgggcgggggttcgtgagcggcgag
caggccagaggtaccgagtccttcagcaggtcgcccaagtccggagacatccccaacacc
tccggccacagcaactcctcggactctaaccggcgggcggtgtccgcctcgcccttcccg
agcaacaaaggcggactgtcgaagaaaagcagcgccgaggagcaggaccgggccctcgac
atgagcgtcgcgtcggccaggagccagggacacctgctcggactgggagccgcgtcttca
gtgctgggtagcatgggtttccatccgggcgtgcgctccgctttcaagccgacgggcgtc
tctaaagtcccgggcgcagaggcgtccagagaggaggccggcggcaagctgagcggcctc
ggattcagtaaactcattgggaacatgaagccaatccgcaacctgggcgaggcccttaat
ggggctgggagccaccctccaaagttcgcgtccaccatcgtggactccacgtctccgatg
gtacagtgcgggaatcccatccgggggttcccactgctgccgcacgtggaggaaacgtcg
gctttcaagcacgtcgagagtcgaatacacaccgggttgtccccctcccggtacccgcaa
atgccccccggcctgcactttgaaaggttctcacttccgcacttcgacggcgtgaagacg
tacggcggagactgcaacatcccgctgatgcccttcaccgtctacaacggggagctcctg
tacagctccccctattacccgctcaaattccacttcagcaacctcctcaagtacccggac
tccgtgccctactttggcgccccccagctgagccaggacctgggctccatcacgaacatc
gaccgggagatcgccatgcacacgcagcagctatcggagatcagctcggacaagagtcgg
gctcggctggactcggtgcccgccgggagcaccggctccaccggctcgggcaaacccaag
aagggccacttgtgtctctactgcgggaagctgtactcccggaagtacggcctgaagatc
cacatgaggactcacacggggtacaagcctctcaaatgcaaagtgtgcttcaggcccttt
ggagacccgagcaacctgaacaagcacatccggctgcacgcggagggcaacacgccctac
aggtgcgacttttgcgggaaggtgctcgtgcggaggcgggacctggagcggcacgtgaag
tccaggcaccccggacagactctgaagaagctggacgacaaaccgggcggcccgttcgac
gacgccgatcacaagagcgacaacgacagcgacgtggacgtgtgcttcaccgacgaccag
agcgaccaggaatcgagcaaaaacaatgacttagttttgtcagagacgatttaa
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