Xiphophorus couchianus (Monterrey platyfish): 114144103
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Entry
114144103 CDS
T05908
Name
(RefSeq) serum response factor-like
KO
K04378
serum response factor
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114144103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114144103
Transcription factors [BR:
xco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
114144103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
114144103
NCBI-ProteinID:
XP_027872394
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Position
5:complement(1144009..1148090)
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AA seq
469 aa
AA seq
DB search
MATRTGAGNGSVAVSSAGPEPTAGQETDGEPFEDLEFSTEVVYSGSDQDSESGDDEDAVG
SGGDRRGVKRERSEHGQSGRSSGGPNRAYSGGNSALSGAKPGKKTRGRVKIKMEFIDNKL
RRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALI
QTCLNSPDSPPRADPSGDQRMSATGFEETDLTYQVAEADAAAEGAKDPVKPAFGPPSSSS
SGPLQSGAPSWQPPASSSNGAVLKTPAGVVLPGGLTLMSGAQLPPGTHTIPLSQLQGPAP
ALQAPPTQPATLLRLPATVSLTGGGVSQQLQTIQVQPSSQQTSNHSGSDTRSPASSTAGL
SVVSSSSSSSSTASHMMYPGGPTVMYATSSPSLADGGLAVLNAFPAGHTPSHDPGAVQQV
FLTSLPPVAAQIPVSAVQLHPMVIGAPGGGGSLAELQVVSLDIHQSKED
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagaaccggggcaggcaacggcagtgttgcggtgagctccgcgggacccgaa
ccgaccgctggacaggagacggacggcgaacctttcgaggacctggagttcagcaccgag
gtggtctacagcggctcggatcaggactcggagtccggggacgacgaggacgccgtgggt
tccggcggggaccgcaggggcgtgaagcgggagcggagcgagcacggtcaatctggccgg
tcctccgggggcccgaaccgggcttacagcggcggaaactccgcgctgtcaggagccaaa
cccgggaagaagacccgagggcgggtcaagatcaagatggagttcatcgacaacaagctg
cggcggtacacgacgttcagcaagaggaagaccggcatcatgaagaaggcctacgaactg
tccaccctgactgggacccaggttctgctgctggtggccagtgagacgggtcacgtttac
accttcgccaccaggaagctgcagccaatgatcacctcggagacgggcaaggcgctgatc
cagacctgcctcaactcgcctgactcgccgccgcgcgccgacccgtccggcgaccagcgc
atgagcgccaccggcttcgaggagaccgacctgacctaccaggtggccgaggcggacgcc
gccgccgagggcgccaaggatccggtgaagccggccttcggcccgccttcctcctcttcc
tcaggccccctgcagagcggcgccccctcctggcagcctccggcctcctccagcaacggc
gcagtgctgaagactcctgcaggagtggttctccctggaggactcaccttgatgtcaggt
gcccagctgccccccggcacccacaccatccccctcagccagctgcagggccccgccccc
gcgctccaggctccacccactcagccggccacgctgctccgcctccccgctaccgtttct
ctgacaggaggcggagtctctcagcagctgcagaccattcaggttcagcccagtagtcag
caaacatccaatcacagcggctctgacacacgcagccccgcctcctccacagctggtctc
tctgtggtctcttcttcctcctcctcttcctccacggcgagtcacatgatgtatcctggc
ggtcccactgtgatgtacgccacgtccagcccctctctggccgacggcggcttggccgtc
ctcaacgccttccccgccggccacaccccgtcccatgacccaggtgcggtccagcaggtc
ttcctcacatctcttcctccggttgctgctcagatcccggtttctgctgtgcagctgcac
ccgatggtgatcggtgcgcccggcggtggtggcagcctggcggagctgcaggtggtcagt
ctggacattcatcagtccaaggaggactga
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