Xiphophorus couchianus (Monterrey platyfish): 114144385
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Entry
114144385 CDS
T05908
Symbol
tmc6
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xco02000
]
114144385 (tmc6)
03037 Cilium and associated proteins [BR:
xco03037
]
114144385 (tmc6)
Transporters [BR:
xco02000
]
Other transporters
Pores ion channels [TC:
1
]
114144385 (tmc6)
Cilium and associated proteins [BR:
xco03037
]
Other cilia and associated proteins
Stereociliary proteins
114144385 (tmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF3576
Motif
Other DBs
NCBI-GeneID:
114144385
NCBI-ProteinID:
XP_027872944
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All DBs
Position
5:29690409..29715171
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AA seq
829 aa
AA seq
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MAHNVNFDLSHPRVEAGLESPADEEGVHDSFSQLIAEESQKEGPSDAIELQYQQRNPEDK
DRDNVAYLSPSENRRWRIGSDKTGEEDKGRQTDSLLKDSWSSATLKILSSMPSRTIGRSR
GAIISQYYNRTAELRRRTQRRASIKDFARSARPSIRGYGVEVDTTDSAEKKQERLIQNLQ
NLSAVDRVRLLKEMPLNLSEKKSLRRLTLQMTKQTRSSSNLRCCSYLKFHIILALRHSWY
NCLSFLHSLHLWQMPLKRVSGRFGSGVLSYFLFLKTLLFFNMFLFLVLGSFLVVPQAVYP
PEQLENRKSFTGLELFTGGGYFANTLLYYGYYSNHTLHSCSKNNISSPPKPECDSKSLSY
NMPLAYFFTIGLSFFVTCIILVYSMSKSFGQSFRIDKSNGMLAMKVFCSWDFKVIKRSSV
RLLSENIRTQLKELLGEAHHRHIRSTISDKLVRLVMHGLGWILCIGATAGCVAVIYYFSD
YMHKEQLKSSQNDSGDPELLKEASLLALPVLVSFINLMLPILFQFTAWMEKYNSPSLRTF
VSLSRNLILKVSVLGVLCFHWLKRVAGSADNNKTFKCWESFVGQELYRFLIIDFIFTLLA
TLFGELLWRSFSDKVLKRNRRPGFDIAKNVLDLIYGQTLAWLGLLFAPLLPAVQILKLLL
LFYIKMSSVMMNCQAPSRAYRVSQMTTIFITLLCFPSFLGASVCVTYTMWRLPSSESCGP
FRGNKTMIQAGKQRIVELVKENPNLYFLAEAHTYLVENPLVLFVGATIFLIVIYFQSQVV
DGQRKIIALLQEQIENEGEDKKFLITRLQSVHERKRTPARNLTSQDSGC
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggctcacaatgttaactttgacctgagtcaccccagagtggaagctggactggaaagc
ccagcagatgaggaaggggttcatgattcattcagccagctgattgcagaagagagtcag
aaggagggaccgtctgatgccatcgagctgcagtatcagcagaggaatccagaagacaag
gaccgagacaatgtggcgtatttgtcaccctctgagaatcggcggtggaggataggaagt
gataaaactggagaagaggacaaaggaagacaaacggactctctcctcaaggattcctgg
tcttcagccaccctgaagatcctctcctccatgccgagccgcactatcggccgcagccgg
ggagccatcatctctcagtactacaacaggaccgctgagcttcgaagacgcacgcagaga
agagcgtccatcaaagacttcgctcgctccgccagacccagcatacgaggctacggcgtg
gaggtggacactacagactcagcagagaagaagcaggagcgattgatccaaaacctgcag
aacttgtcggcggttgaccgagtgaggctgctcaaagaaatgcctctgaatttgtctgag
aaaaaaagcctcaggaggttgacgttgcaaatgactaagcaaacacgttccagcagtaat
cttcgctgttgcagttatctgaaatttcacatcattttagccttgaggcacagctggtac
aactgtttatccttcctgcactccctgcacctgtggcaaatgccgctcaagagagtcagc
ggacgcttcggctccggggtcctctcctacttcctgttcctcaagactctcctcttcttc
aacatgttcctttttctggtcttgggttcgttcttggtggttccacaggcagtgtacccc
ccagagcaacttgaaaacagaaagtccttcactggactggagctcttcaccggagggggt
tacttcgctaacaccctgctgtactacggatactacagtaaccacacactgcatagctgt
tcgaagaataacatctccagtcccccaaaaccggagtgtgactcaaagtccctgtcctac
aacatgccgcttgcatatttcttcacaatcggactgtccttcttcgttacatgcatcatc
cttgtgtacagtatgtcaaagtcgtttggtcagagcttcaggatcgataagtctaacggc
atgttggccatgaaggtcttctgctcgtgggactttaaggtcatcaagagaagctcggtc
aggctgctgtctgaaaacatccgcacccaactcaaggagctgctgggagaagcacatcac
aggcacatcaggagtacaatctcagacaagttggtcagacttgtgatgcatggcctgggt
tggatactctgcattggagctaccgctggatgcgtggctgtgatttactacttctcagat
tatatgcacaaagaacagcttaaaagttcacaaaatgattccggggatccagagttatta
aaagaagccagcctgttggctctgcctgtcctggtctccttcatcaacttgatgttaccg
atcctcttccagttcacagcctggatggagaagtacaattctccatctctgcgcacgttt
gtttcactcagtcgaaacttgatattaaaagtgagcgtgctcggagtcctctgcttccat
tggttgaaacgggtggctggcagcgccgataataacaagacattcaagtgctgggagagt
tttgttggccaggagctttaccgcttcctaatcatcgacttcatcttcactctgctggct
accctgtttggagagctgctttggaggtcattctctgacaaagtgctcaagcgaaacaga
agaccggggtttgatatcgccaagaatgtcctggacctcatctatggacagacgttagcc
tggttgggtcttctcttcgctcctctcctgcctgctgtgcagatcctcaaactgctgctg
cttttctacattaagatgagcagtgtgatgatgaactgtcaggcccccagcagggcatac
agagtcagccagatgaccaccatcttcatcaccctcctgtgcttcccctccttcctcggt
gcctccgtgtgcgtcacatacaccatgtggaggctcccatcgtcagagtcatgcggtcct
ttccgtgggaacaaaaccatgatccaggcggggaaacaaaggattgttgagctggttaaa
gaaaaccccaacttgtactttctggctgaagctcacacctatttggtggaaaatcccctt
gtcctgtttgtgggagcaaccatctttctgatagtcatttacttccagagtcaggtggtg
gacggccaaaggaagatcatcgctttactgcaggagcagatagaaaacgagggagaagac
aaaaagttcctaattacccggcttcagtccgtccatgagcgcaaacggaccccagcgaga
aatctcacaagtcaggactctggatgttaa
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