Xiphophorus couchianus (Monterrey platyfish): 114144503
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Entry
114144503 CDS
T05908
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04020
Calcium signaling pathway
xco04080
Neuroactive ligand-receptor interaction
xco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
114144503
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114144503
04082 Neuroactive ligand signaling
114144503
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114144503
Ion channels [BR:
xco04040
]
Ligand-gated channels
Glutamate (ionotropic)
114144503
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
DUF3663
Motif
Other DBs
NCBI-GeneID:
114144503
NCBI-ProteinID:
XP_027873204
LinkDB
All DBs
Position
5:263376..341347
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AA seq
904 aa
AA seq
DB search
MAARSVLLLAALHCCSVALCGCEPRQVNVGAVLSQKRYEQVFKDAVTQANDLYGKDKFKM
NAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVG
LTTRMSIYSDKSIHLSFLRTVPPYSHQAQVWFDLMREFRWNHIILIVSDDHEGRAAQKKL
ETLLEERETKTKNRNYENLDQQNFDFRRTPKAEKVLLFSQDTNLTALLLEAKDLEARVII
LSASEDEAMAVYKAARQLNMTGSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAH
ITDAVAVVAQSLQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMASKYPDGLTGRIEF
NDDGDRRFATYSILNHQKAGRVIQVGVFNGTQVVMNPQRKIIWPGGETEKPVGYQMSTRL
KIVTIHQEPFVYVKPTQSDGTCKQEHTVNGVVIKKVICTGPNGTIPGQPIVPQCCYGFCI
DLLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTIN
NERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLL
DRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFA
MIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS
TMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGI
GMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLV
AGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPYPTDITGQLNLSDPSV
STVV
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgcagcgtgctgctgctggccgcgctgcactgctgctcggtggcgctgtgc
ggctgcgagccgcgccaggtgaacgtgggcgccgtgctgagccagaagcgctacgagcag
gtgttcaaggacgccgtgacgcaggccaacgacctctacggcaaggacaagttcaagatg
aacgcaatctccgtcacgcacaagcccaacgccatccagatggcgctgtccgtctgcgag
gacctcatctccaaccaggtgtacgctatcctggtcagccatcctccgcagtccaacgat
cacctgactcctacgcccgtctcttacacggccgggttctaccggatcccggtggtcggc
ctgacgactcgcatgtccatctactccgacaagagcatccacctgtccttcctgcggacg
gtgccgccgtactcccaccaggcccaggtgtggttcgacctgatgagggagttcaggtgg
aaccacatcatcctgatcgtcagcgacgaccacgagggccgagccgcccagaagaagctg
gagacgctcctggaggagcgggagaccaagactaaaaacaggaactatgaaaacctcgac
caacagaactttgacttcaggagaacacccaaggcggagaaggtgctgctgttcagccag
gacaccaacctgacggcgctgctgctggaggccaaggacctggaggcccgagtcatcatc
ctgtcggccagtgaggatgaagccatggccgtgtacaaagcggcccgtcagctcaacatg
accggttctggctacgtctggctggtcggagagcgggagatgagcgggaaagctctgagc
gaagctcctgatggcttgctgggcctccagctgatcaacgggaagaacgagtcggctcac
atcacggacgctgtggccgtggtggctcagtccctgcaggagctgtttgagaaggagaac
atcacggagccgccgcggggctgcgtggggaacaccaacatctggcggaccgggccgctc
ttcaaacgggtgctgatggcatcgaagtacccggacggcctgacgggacgaatcgagttt
aacgacgatggcgaccgccgcttcgccacctacagcatcctgaaccaccagaaggcgggg
cgcgtcatccaggtgggcgtgttcaacgggacacaggtggtgatgaatcctcagaggaag
atcatctggcctggaggagagacggagaaaccagtgggataccagatgtccaccaggctg
aagatcgtgacgatccaccaggagccatttgtttacgtgaagccgacgcagagcgacggg
acgtgtaagcaggagcacacggtgaacggagtcgtgatcaagaaggtgatctgtaccgga
cccaacggaaccatcccaggtcagcccatcgttcctcagtgttgctacggtttctgcatc
gacctgctcatcaagctggccatgagcatgaacttcacctacgaggttcacctggtggcc
gacggcaagttcggcacgcaggaacgggtgaacaacagcaacaagaaggagtggaacggc
atgatgggagagctgctgggcggcctggccgacatgattgtggcgccgctcaccatcaac
aacgagcgcgctcagtacatcgagttctccaagcccttcaagtaccagggcctgaccatc
ctggtcaagaaggaaatcccccgcagcactctggactcgttcatgcagccgttccagagt
actctgtggctgttagtcggtctgtcggtccatgtggtggcagtgatgctctacctacta
gaccggttcagcccgtttggaaggtttaaggtgaacagtgaagaagaagaagaagacgcc
ctgaccctgtcctccgccatgtggttctcctggggagttctgctcaactctgggatcgga
gaaggcgccccgcggagcttctccgccaggatcctgggcatggtgtgggcggggtttgct
atgatcatcgtggcgtcgtacaccgccaacctggcggccttcctggtgctggaccggcct
gaggagcgcatcactggcatcaacgaccccaggctgcgtaacccgtcagataagttcatc
tacgccacggtgaagcagagctcggtggacatctacttccggcggcaggtggagctgagc
accatgtaccgccacatggagaagcacaactacgagagcgccgccgaggccatccaggca
gtccgagacaacaagctccacgccttcatctgggacagcgccgtgctggagttcgaggcg
tcgcagaaatgcgacctggtgacgacgggggaactgttcttccgctccggcttcggcatc
ggcatgaggaaggacagtccctggaagcagaacgtctctctggctattctcagctcgcac
gagaacggcttcatggaggatctggacaagacgtgggttcgctaccaggagtgcgactcc
aggagcaacgcccccgccacactcacctttgagaacatggcaggtgtgttcatgctggtg
gctggcggcatcgtcgctgggatcttcctcatcttcatcgagatcgcctacaagcggcac
aaagacgcgcgcaggaaacagatgcagctggccttcgccgccgtcaacgtgtggaggaag
aacctgcagccgtacccaacggacatcaccggtcagctcaacctatcggatccctccgtc
agcacggtggtctga
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