Xiphophorus couchianus (Monterrey platyfish): 114144510
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Entry
114144510 CDS
T05908
Symbol
ddx31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31 isoform X1
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xco01009
]
114144510 (ddx31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xco03009
]
114144510 (ddx31)
Enzymes [BR:
xco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114144510 (ddx31)
Protein phosphatases and associated proteins [BR:
xco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114144510 (ddx31)
Ribosome biogenesis [BR:
xco03009
]
Eukaryotic type
Pre-60S particles
Helicases
114144510 (ddx31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
114144510
NCBI-ProteinID:
XP_027873217
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All DBs
Position
5:complement(205268..210915)
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AA seq
706 aa
AA seq
DB search
MTSSAEQQLCLNICSVPSSSSSSLPCSRKWAKRKKWTLKKQKPEKKKKSFISPEEEEEDE
EAHLQVPPPELTHGAPQKKKRRKEEVKEGGSGSIKTSSLFRHNPEIPEILRPAVAQLKEK
VFTSDFFSDLHLHPHLVATLNKVLNVSRLTSVQQQTIPALLSGRDAAVRSQTGSGKTLSY
AVPLVQRLQASEPKVSRSDGPLALVVVPTRELALQTYNTFQKLLKPFTWIVPGILMGGEK
KKAEKARIRKGMNVVVSTPGRLADHVQNTLSLSLGAVRWLVLDEADRILDLGFDRELTVI
LNGLNRTGPTRQNVLLSATLSPGVTRLADVCLRDPISICVSGPAPSDPPSQSESFAVPEA
LQQFVVLVPSKVRLVCLAAFILDQCKFSQGNKMIIFVSSCEAVEFLHLLFSSVLTRHSAN
RELSFLRLHGNMKQEERCQVFHQFSASTTGVLLCTDVAARGLDLPQVTWIVQYTPPSSAA
EYVHRVGRTARIGGRGNGLLFLTPAEAAFITELANHNISVSEMKLQDVLSCLMKDDAFKG
RGKYHSQTSPRALQQDIRERATVLQTQLEDFVHSDARWVQAAKKALQSFLRAYTTYPAPL
KQVFHLRRLHLGHAAKSFGLRDAPQGLSPGPAPGARRGPGDQVRSRSQDQTRKRAGSPRK
NQNQNPGRQRLHPGHREAVLIRSEFSSGLEGGGAKRKRKVTEEEED
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcatcagcagagcagcagctgtgtctgaacatctgcagtgttccttcatcatca
tcatcatcactgccctgcagcaggaaatgggcgaaacgcaagaaatggaccttgaagaag
cagaaaccagagaagaagaagaagagcttcatctccccagaggaagaggaggaggatgaa
gaggctcacctgcaggtcccgccccctgagctgacccatggagcaccacagaagaagaag
aggaggaaggaggaagtgaaggaaggaggaagtggcagcatcaagacttcctctctgttc
agacacaacccagagatcccagagatcctcagaccggccgtcgcccagctgaaggagaag
gttttcacctccgacttcttttcagacctccacctgcacccccacctggtggcgacgctc
aacaaggttctgaacgtctccagactgaccagcgttcagcagcagaccatcccggctctc
ctgtccggacgggacgcagcagtccggtcccagacgggttcagggaagacgctgtcctac
gccgtcccgctggtccagcgcctgcaggcctccgagccaaaggtcagcaggtcggacggc
ccgctggcgctcgttgtggttccgacccgggagctcgccctgcagacctacaacaccttc
cagaagctgctcaagccgttcacttggatcgttcctggcattctgatgggaggagagaag
aagaaagcagagaaggcccggatccgtaagggaatgaacgtggtggtgtcaacgccgggc
cgcctggccgatcacgtccagaacacgctcagcttgtcgctcggcgccgtgcgctggctg
gttctggacgaggcagacaggattctggacctgggcttcgaccgggagctaacggtgatc
ctgaacgggctgaacagaaccgggccgacccggcagaacgtgctgctgtcggccacgctg
agtccaggtgtgacgcgcctggcggatgtctgcttgcgggatccaatcagcatctgtgtt
tctggccccgccccctctgacccgcccagccaatcggagagcttcgccgttccagaggcg
ctgcagcagtttgtggttttggttcccagtaaggtccggctggtgtgtctggccgccttc
atcctggaccagtgcaagttctctcagggcaacaagatgatcattttcgtgtcgagctgc
gaagccgtcgagttcctgcacctgctcttcagctccgtcctgacccggcactcggccaat
cgggagctcagctttctgcgtctccacggcaacatgaaacaggaggaacgctgccaggtt
ttccaccagttctccgcttccaccaccggagtcctgctgtgcacggacgttgccgccaga
gggctggatcttcctcaagtcacctggattgttcagtacactcctccctcgtcggccgcc
gagtacgttcaccgggtcggccgcacggctcggatcggaggaagaggaaacggcctcctc
ttcctcactcctgctgaggccgccttcatcacggagctggccaatcacaacatcagtgtc
tcagagatgaagctccaggacgttctatcttgtctgatgaaggacgatgccttcaagggg
cgtgggaaataccacagccagacgtcgccccgggcgctgcagcaggacatcagggagcgc
gccaccgtcctgcagacgcagctggaggacttcgttcactccgatgcccgctgggtgcag
gcggctaagaaagcgctgcagtccttcctgcgggcctacaccacctaccccgcccccctg
aagcaggtgttccacctgcggcgcctccacctgggtcacgccgccaagagcttcggcctc
agagacgctccgcagggcctgagccccggcccggcccccggagcccgccggggccccggg
gaccaggtccgcagcaggagccaggaccagaccaggaaacgggcaggaagcccgaggaag
aaccagaaccagaacccggggaggcaacggctccatccgggtcacagggaggcggttctg
atccggtcagagttctccagcggcttggagggaggcggggccaagaggaagaggaaggtc
actgaggaagaggaggactga
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