Xiphophorus couchianus (Monterrey platyfish): 114144713
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Entry
114144713 CDS
T05908
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04120
Ubiquitin mediated proteolysis
xco04137
Mitophagy - animal
xco04144
Endocytosis
xco04340
Hedgehog signaling pathway
xco04350
TGF-beta signaling pathway
xco04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114144713
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
114144713
04350 TGF-beta signaling pathway
114144713
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114144713
04137 Mitophagy - animal
114144713
09144 Cellular community - eukaryotes
04520 Adherens junction
114144713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114144713
04121 Ubiquitin system [BR:
xco04121
]
114144713
03029 Mitochondrial biogenesis [BR:
xco03029
]
114144713
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114144713
Membrane trafficking [BR:
xco04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
114144713
Autophagy
Mitophagy
Other mitophagy associated proteins
114144713
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
HECT type E3
114144713
Mitochondrial biogenesis [BR:
xco03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
114144713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
114144713
NCBI-ProteinID:
XP_027873600
LinkDB
All DBs
Position
5:complement(33614217..33671575)
Genome browser
AA seq
776 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNRL
GPNDNDTVRGQIVVSLQSRDRIGSGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPVNGAVASGPPGEQRVQERRVRSQR
HRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELG
PLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNSPSSNGSRVAPDSQNTNL
SHPPQLKDQGGPGVPPQALSPAQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGH
CRIEVSREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNP
YYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQL
LGKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIPHELKPNGKSIP
VTEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQHLLKSFDEKELELIVCGLGKI
DIADWKSNTRLKHCTPDSNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGA
AGPRLFTIHQIDANANNLPKAHTCFNRIDIPPYESYDKLYDKLLTAIEETCGFAVE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccaaggagtaaggagaaatggcccagtaaagctgcggttgacagtcctctgt
gcaaaaaacctggcaaagaaagacttctttcggttgccggatccttttgctaaagtggta
gtggacggttctggacaatgccactcaacagatactgtgagaaatactcttgatccaaag
tggaatcaacattatgatctctacatcggaaagtcggactccattactatcagtgtctgg
aaccacaagaagatccacaaaaagcagggcgcgggattcctcggctgcgtccggctcctg
tccaatgccatcaacagactcaaagacacgggctatcagagactggacctgaataggctg
ggccccaacgataacgacaccgtaagaggacagatagtagtgagtcttcagtccagagat
cgcatcggatccgggggaccagtggtagactgcagccgcctgtttgacaacgatttgccc
gacggctgggaagagaggaggacagcatcggggaggatacagtacctgaaccacatcacc
cgcaccacgcaatgggagagacccaccaggccggcgtcggagtactccagcccatccgga
cgtccgctgagctgcgtggtagacgaaaacacgccggtgatgactcctgttaacggggcc
gtggccagcggacctccaggcgaacagcgtgtccaggagcgacgggttcgatcgcagcgg
catcggaactacatgagtcgaacacacctgcatacgccgcccgatctgcctgagggctac
gaacaaagaaccacccagcagggccaggtgtatttcctccacacacagaccggagtcagc
acctggcacgacccccgagtacccagggacttaagcaatgtgaactgtgaggagctggga
ccactgcctccaggctgggagatcaggaacaccgccaccggccgcgtctactttgttgac
cacaacaatcgaacaacacagttcacagatccacgattgtctgccaacctgcatctagtg
ctcaacagcccaagttcaaatggttcccgcgtggccccggacagccaaaacactaacctc
agtcatccaccacagctaaaggaccagggtggtcccggagtccctccgcaggctctgtct
cccgctcagctgccggaagaggcggagtgtctgacggtgcccaagtacaagagagacctg
gtgcagaagctgaagattctccggcaggagctctcgcagcagcagccgcaagccggccac
tgccgcatcgaggtcagccgggaggagatcttcgaggagtcgtatcgacaagtgatgaag
atgcgtccgaaggatctctggaaaagactgatgataaaattcagaggagaagagggactg
gactatggaggagttgctcgggaatggttgtacctgctgtcgcacgagatgttgaaccca
tattacggcttgttccagtactccagagacgacatctacactctacagattaacccagac
tctgctgtcaacccagaacacctgtcatacttccactttgtgggccgcatcatgggcatg
gcggtgtttcacggccactacatcgacggaggcttcacgttgccgttttacaaacagctg
cttgggaaaccaatcacgctggacgacatggagtctgtcgaccccgacctccacaacagc
ctcgtttggatcttggacaatgacatcacaggggtcctggaccacactttctgcgtggag
cacaacgcttacggagaaatcatcccacacgagctgaagcccaacgggaagagcatcccg
gtgacggaggacaccaagaaggagtatgtcaggctctacgtgaactggcgtttcctccat
ggcatcgaggctcagtttctggctctccagaaaggcttcaacgaggtcatcccgcagcac
ctgctcaagtccttcgacgagaaggaattagagctgatcgtgtgcggcctggggaagatc
gacatcgccgactggaagtccaacactcggctgaagcactgcaccccagacagcaacatt
gtcaagtggttctggaaagccgtggagtcgttcgacgaggagaggagggcccggctgctg
cagttcgttactggctcgtccagagtcccgctgcagggcttcaaggctttacagggtgca
gcaggacccagactcttcaccattcatcagattgatgccaacgccaataacctgcccaaa
gcgcacacctgcttcaaccggatcgacattcctccctacgagagctacgacaaactgtac
gacaagctactgacggcgatcgaggagacgtgcggcttcgcggtggagtga
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