Xiphophorus couchianus (Monterrey platyfish): 114144718
Help
Entry
114144718 CDS
T05908
Symbol
thumpd1
Name
(RefSeq) THUMP domain-containing protein 1
KO
K06963
tRNA acetyltransferase TAN1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xco03016
]
114144718 (thumpd1)
Transfer RNA biogenesis [BR:
xco03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
114144718 (thumpd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THUMP
PGA2
RNase_P_Rpp14
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
114144718
NCBI-ProteinID:
XP_027873608
LinkDB
All DBs
Position
5:36394220..36397717
Genome browser
AA seq
319 aa
AA seq
DB search
MSAAQNESRKRSKKRYVSGQQGKRWKGSRELEVGMQGILITCNMNERKCTAEAFNLLNEY
ADKLYGPEKLQNNKGSSSSEEEEAEEEDVDVALKKEVAQLQSSAGKRERRFQALESGANN
VIFIRTHNLEPDKLVHHILSDLHSTKKKKSRVILRMLPVTGTCKAFQEDMLKYLTIFLEP
WFRTPHSATYQIAFKARNSSHNKREEIIKSIAGLVGKLNPKNKVDLTNPELTIIVEVIKA
VCCVSVARDYTLYRKYNVQEVVKEDAAKTKTDANAAEQRDEHNGGEAEKDKEEEAAQDEE
KTGAQNEEQEVHKDEGGGE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgcgcagaacgagtcgagaaagcggagcaagaagcgctacgtgtccggtcag
cagggcaagcggtggaagggctcccgggagctggaggtgggaatgcaggggatcctcatc
acctgcaacatgaacgagagaaagtgcaccgcggaggccttcaacctgctcaacgagtac
gcggacaagctctacggaccagagaagcttcagaacaacaaaggaagcagcagcagtgag
gaagaagaagccgaagaagaagatgtagacgtggcgttgaagaaggaagtcgcacagctt
cagtcgtctgcaggcaaacgggagaggcgcttccaggccctggagagcggcgctaacaat
gtcatcttcatcagaactcacaatctggaacctgacaaattggttcatcacattctgtct
gacctccactccaccaagaaaaagaagtcacgagtgatcctccggatgctcccagtaacg
ggaacgtgcaaggcgttccaggaagacatgctgaaatacctgactatcttcttagagccc
tggttcagaacgccacacagtgcaacctaccagattgccttcaaggcccgaaacagcagc
cataacaagagagaggaaatcatcaaatccatcgcaggcctcgttgggaagctgaacccg
aaaaacaaggtggacctgactaaccccgagctgacgataatcgtggaggtcatcaaggcc
gtgtgctgcgtcagcgtggccagagactatacgctgtacaggaagtacaatgttcaggaa
gtggtaaaagaggacgcggccaagacgaaaaccgacgcgaacgcggccgaacagagagac
gagcacaacggaggggaggcggagaaggacaaggaggaggaagctgcacaagatgaggag
aaaactggagcacagaacgaagagcaggaggttcataaggacgaaggtggcggagaataa
DBGET
integrated database retrieval system
