Xiphophorus couchianus (Monterrey platyfish): 114144726
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Entry
114144726 CDS
T05908
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xco00536
]
114144726 (slit2)
Glycosaminoglycan binding proteins [BR:
xco00536
]
Heparan sulfate / Heparin
Axon guidance molecules
114144726 (slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
LRR_5
Laminin_G_2
Laminin_G_1
LRRNT
LRR_9
EGF_TEN
LRRCT
LRR_1
hEGF
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
Laminin_G_3
EGF_Teneurin
LRR_EndoS
EGF_3
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
114144726
NCBI-ProteinID:
XP_027873619
LinkDB
All DBs
Position
5:complement(14175239..14279266)
Genome browser
AA seq
1564 aa
AA seq
DB search
MVGAVRSVGLGRSLETAPRLLLLGTVLVLVLISRADSQPCPPQCSCTGTTVDCHGQGLRS
VPRNIPRNTERLDLNANNLTKITKGDFAGLRHLRVLQLMENKITTIERGAFQDLKELERL
RLNRNNLAVFPELLFLATTKLHRLDLSENQIQGIPRKAFRGAVEIKNLQLDYNHISCIED
GAFRALRDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRP
RLGLYTQCMAPPHLRGHNVAEVQKKEFVCTDAEEGHQSSSSSSCSVLQCPESCTCSNNIV
DCRGKGLTEIPTNLPETITEIRLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISELASDAF
QGLRSLNSLVLYGNKITEISKGLFEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLY
DNKLQTIAKGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLA
NKRIGQIKSKKFRCSGNEDYRSKLGGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIP
QYTTELRLNNNEFTVLEATGIFKKLPQLRKINLSNNRISDIEEGTFEGALGVNELILTSN
RLENIHHRMLKGLGGLRTLMLRSNKISCVSNSSFVGLSSVRLLSLYDNQITSMNPGAFDT
LHSLSTLNLLANPFNCNCHLAWLGDWLRRKRIVTGNPRCQNPYFLKEIPIQDVAVQDFAC
EDGNNENSCSPVLRCPAECSCLDTVVRCSNKGLTALPKGLPKETTELYLDGNHFTQVPVE
LSNYKHLTLIDLSNNQISTLSNHSLSNMSELLTLILSYNRLRCIPVRAFDGLKSLRLLSL
HGNDISLIPEGAFKDLSSLSHLALGANPLYCDCHLQWLSDWVKSGYKEPGIARCAGPGDM
TDKLLLTTPSKKFTCTGPVDLSIQAKCDPCLSSPCKNDGTCSGDPVHYYRCTCPYGFKGQ
NCEEPIHACISNPCQNSGTCHLKEGDGSHFWCVCPEGFEGDTCEINIDDCEDNDCENNST
CVDGINNYTCMCSPEYTGELCEEKLNFCTPELNPCQHDSKCILTPRGYKCECTPGYVGEQ
CELDYNDCEENKCQNGGHCIDAVNGYTCICPEGYSGLFCEFTPPMVLPRTSPCDNHDCLN
GAQCVVVGTDPRCQCLHGYEGEHCETLVSVNFVNRESYLQLPSNLLSPQTNISLQIATDE
DSGVLLYKGDNDHIAMELYRGRLRVIYDTGSYPPSAIYSVETVNDGSFHSVELVAADQTL
SLSIDGGPPKSISSISKQSTLNLDSPLYLGGMPEQASASGGLSALQLSSGGRNGTSFHGC
LRNLYINGKLQNLGAGHDQSSPGPGTLRSYRQWLGNGVEPGCQPCQRGACVQGDCHPTGH
QGFTCTCHPGWTGALCDQQVSNPCDGNKCIHGTCLPINSYSYSCVCQPGFAGVLCDVQDL
DTANPCSLSRCKHGKCRVSGLGKAYCECNSGYTGEACDREVACRGERVRDVYQRQQGYAA
CQTQEKVSRLECRGSCPGGAEGQGTCCTPLRSKRRKYTFQCTDGSSFVQEVEKVVKCGCT
KCSS
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagctgtgcgctccgttggccttggccgctccttggagactgcaccgaggctt
ctgctcctggggaccgtcctcgtcctggtcctgataagcagagcagacagtcagccgtgc
cctcctcagtgttcctgcaccgggaccacggtggactgtcacggccaaggactgcggagc
gttcccaggaacataccccgaaacacggaaagactggatctgaatgcaaacaacctcact
aaaatcaccaaaggggattttgcaggcctgaggcatctgagagtcctgcagttgatggag
aacaaaatcaccacaattgagagaggagcgttccaggacctgaaggagctggagagactc
cgcctgaatcggaataatctggccgtgtttcctgagctacttttcctggcaacgacaaag
cttcacagacttgacctgagcgaaaaccagatccagggaattccaagaaaagcattcaga
ggagctgtggaaatcaagaacctacagttggactacaaccacataagctgcattgaagat
ggagccttcagagcgttacgtgacctggaagtgctcactctgaacaataacaacatcagc
cggctgtctgtggccagtttcaaccacatgccgaagctcaggactttccgtcttcactcc
aacaacttgcagtgcgactgtcatgtagcctggttgtccgagtggctacgacagcgcccc
cgcctgggcttgtacacacagtgcatggcccctcctcacttgcgggggcacaacgtggct
gaggtgcaaaagaaggagtttgtgtgcacagatgcagaagaaggtcatcagtcgtcatca
tcttcctcctgcagtgtgttacagtgcccagagtcctgcacctgcagtaacaacattgtg
gactgcagaggaaagggtctgacagaaatacccaccaacctgcctgaaaccattactgag
atacgactggagcagaacgccatcaaggtgatcccagctggggccttttctccttataag
aagctacgcagaatagatttaagcaacaaccagatctcagaattggcttcagacgccttc
cagggtctgcgatcccttaactctttggtcctctatgggaacaaaatcactgagatttcc
aagggactcttcgaaggactgttctcactgcagctattgttgctaaatgctaacaagata
gcatgtctgcgggttgacgcatttcaggaccttcacaacctcaatctgctctctctgtat
gacaacaagctccagaccattgcaaaggggacgttctcctcactaagagcaatacaaaca
cttcatttagctcaaaacccatttatctgtgactgccatctgaagtggctggctgactac
ctgcaggacaatcccattgagacgagtggcgcccgctgcaccagtcctcggcggctcgcc
aacaagcggatcggccaaatcaagagcaagaagttccgctgctcaggtaatgaggattac
cgcagcaagcttggaggtgactgcttcgccgacctggcctgccctgagaaatgccgctgt
gagggcacgacggtcgactgctccaaccagaaactgaccaaaatccccgatcacattcct
cagtacaccaccgagctgcgtctgaacaacaatgagttcacggtactcgaggcaacgggg
atcttcaagaagttgcctcagctaaggaagattaatctgagtaataatcgtatcagcgac
attgaggaggggacttttgaaggagctttaggggtcaacgagctgattctgacctccaac
agactggagaacatacaccaccgcatgctgaagggactcggtggcctccgcacacttatg
ctgagaagcaacaagatcagctgtgtgagtaacagcagcttcgtggggttgagttctgtc
agactgctttctctctacgacaaccagatcacctccatgaaccccggcgccttcgacaca
ctgcactctctctccacactgaaccttttggccaatcccttcaactgtaactgccacctg
gcctggctcggcgattggctgagaaggaaacgcatcgtgactgggaatcctcgctgccaa
aacccttatttcctgaaggagattcccatccaggatgtggctgttcaggactttgcctgt
gaagatggaaacaatgagaacagctgctctcctgtcctgaggtgtccagctgagtgttcc
tgcctggacactgtggtgcgctgcagcaacaaaggcctcaccgcgctgcccaaaggcctc
ccaaaagagaccactgaactatatttggacggaaaccacttcactcaggttccagtggag
ctctccaattacaaacacttaacgctcattgatttgagtaacaaccagatcagcacgttg
tccaaccacagcctcagtaacatgtccgaactgcttacactaatcctgagctacaaccgt
ctgcggtgcataccagtgagggcgttcgatgggctcaagtctttgcgtttgctatctctt
catggtaacgacatatccctgattccagagggagcctttaaagacctgtcttcactttct
catctggctctgggtgccaaccctttgtactgtgactgccacttgcagtggctgtccgac
tgggtcaagagcggctacaaggagcccggcatcgcccgctgtgctgggcccggtgacatg
acagacaaactgctcctcaccacaccttccaagaagttcacctgcacaggcccggtggat
ttgagtatccaggccaagtgtgacccctgtctgtccagcccctgtaaaaatgacggcaca
tgctccggtgatcctgtgcactactaccgctgcacttgcccctatggatttaagggacaa
aactgtgaggagcctattcatgcctgcatcagtaatccctgccagaacagtggaacttgc
catctgaaggaaggagatggaagccacttttggtgtgtgtgtccggagggcttcgaaggc
gacacttgtgagatcaacattgatgactgtgaggataacgactgtgagaacaactccacc
tgcgtggacggaatcaacaactacacctgcatgtgctcaccagaatacacaggggagttg
tgtgaggagaaactgaacttctgcaccccagagcttaacccgtgtcagcacgactcaaag
tgcattttgacccctcggggatacaagtgtgagtgcactccagggtatgtaggtgagcag
tgtgagctggactataacgactgtgaagagaacaagtgtcagaacggaggtcactgcatt
gatgccgtgaacggatacacctgcatctgtccagagggatatagtgggctgttctgcgag
ttcactcccccaatggtcctccctcgaaccagtccctgtgacaaccacgactgcctaaac
ggagctcagtgcgttgttgtgggaacagacccacgctgccagtgtctccatggatacgag
ggcgagcattgtgaaacgctcgtgagtgtgaactttgtcaaccgggagtcctacctgcag
cttccctccaatctcctctcaccacaaaccaacatcagcttacagattgctactgatgag
gacagcggcgtcttgttgtacaagggtgacaatgatcacatcgcaatggagctgtacagg
gggcgtctcagggtcatctacgacactggatcctacccgccttctgcaatatacagcgtg
gagacggtgaatgatggtagtttccattctgtggagttagtagcagctgaccagacgttg
tcactgtccattgatggcggaccacccaaatccattagctccatcagcaaacagtccacg
ctcaacctagattccccactttacctgggaggaatgccagagcaggcatcagcttctggc
ggcctttctgcactgcagctcagctccggaggccgtaacggcaccagctttcacggatgc
ctccgtaacctctacatcaacggaaagctccagaacttgggagccgggcatgaccaaagc
tctccaggtccaggaactttgcggagctacagacagtggctgggaaacggggtggagcca
ggctgccagccgtgccagagaggtgcctgcgtccaaggcgactgccacccaacgggtcac
caaggtttcacctgtacctgccatcctgggtggactggggctctgtgtgaccagcaagtt
agcaatccttgtgatggaaacaagtgtattcatggtacctgccttccaatcaactcctac
tcctactcctgcgtttgccagcctggtttcgctggtgttctctgtgatgtacaggacctg
gatacagctaacccctgcagcctgtctcgctgcaaacacggcaaatgtcgagtgtcaggc
ctgggtaaagcatactgcgagtgtaacagcggatacacaggggaggcatgtgacagagag
gtggcctgccgaggggaacgggtcagagatgtctaccagagacagcaaggctacgcggcg
tgccaaacccaggagaaggtctcccgtctagagtgtcgaggcagctgcccggggggagca
gagggacagggcacctgctgcacccccctccgtagcaaacgcaggaaatacaccttccag
tgcactgatgggtcttcttttgtccaagaagtggaaaaggttgtcaagtgcggctgtaca
aagtgttcttcgtaa
DBGET
integrated database retrieval system
