Xiphophorus couchianus (Monterrey platyfish): 114144732
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Entry
114144732 CDS
T05908
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110
Cell cycle
xco04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114144732 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xco00535
]
114144732 (smc3)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
114144732 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
114144732 (smc3)
Proteoglycans [BR:
xco00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
114144732 (smc3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
OmpH
AAA_29
MFD_D3
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
114144732
NCBI-ProteinID:
XP_027873631
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Position
5:31781525..31812659
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSTKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSKVSAMKEEREQLSSERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNMVKEKEER
GISRLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEMNKEKNLEQYNKLDQDLNEVKTRVEELDKKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLSKLDVRDTAY
PETNDAIPMISKLRYSPNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELAELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRVKDTLARSDDLDGLVDKTEAEIKEHIKS
MERWKNIEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGSQSQDEGEGGEGSERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatattaaacaggtcattatccaggggttcagaagttatagggatcaaactgttgtg
gacccctttagtcccaagcacaatgtgatcgtcggcagaaatggttctggaaaaagtaac
ttcttctatgctatccagtttgtgctcagcgatgaattcagccacctgcgacccgaacag
cgcctggccttgcttcatgaaggaactggtccacgtgtcatttcagcttttgtggagatt
atatttgataactccgacaaccggctgccgatcgacaaagaggaggtctcccttcgccgt
gtcatcggcgcgaagaaggaccagtacttcttggacaagaagatggtgactaagaatgac
gtcatgaaccttctggagagtgccggcttctctcgcagtaacccatactacattgtcaag
cagggaaagatcaaccaaatggccacagcgcccgattctcagcgactgaagcttctgaga
gaggtggcaggaacgcgagtctacgacgaacgaaaggaggagagtatttctctcatgaag
gagacggagggaaagcgagagaagatcaatgagctgctgaagtacatcgaggagcgtctg
cataccctggaggatgagaaggaggagctggctcagtaccagaagtgggacaagatgagg
agagctctggagtacaccatttacaaccaggagctgaacgaaactcgcgccaaactagat
gagttgtccaccaagagagagacctgtggagacaaatccagacaactgcgtgacgctcag
caagacgctcgggacaaagtagaggagacggagcgcgttgtgcgcgagctgaagtccaag
gtctctgccatgaaggaggagagagagcaactgtcgtcggagcgccaggagcagatcaag
cagaggaccaagctcgagctgaaggccaaggacctgcaggatgagctggcaggcaacagt
gaacagaggaaacggctgctgaaggagcgacagaagctgctggagaagatcgaggagaag
cagaaggagctccaggagaccgaacccaaattcaacatggtgaaggaaaaggaggagcgg
ggcatctctagactggctcaagctacccaagagaggactgacctgtatgccaagcagggc
cgcggcagtcagttcacctccaaagaggagagggataagtggatcaagaaggagttgaag
tcgctggaccaggccataaatgacaaaaagaggcagattgcagccatccacaaagacctg
gaggacacggagatgaacaaggagaagaacctggagcagtataacaaacttgatcaagat
ttaaatgaggtgaagacccgggttgaagagctggacaaaaaatattatgaagtgaagaac
aagaaagatgaactccaaagtgaaagaaactacctgtggcgggaggagaacgcagagcaa
caggccctggcagccaagcgagaggacttggagaagaagcagcagctcctccgagctgct
acaggcaaggccattctgaacggtatcgacagcataaacaaagtattggagcattttagg
aggaaggggattaaccagcatgtcatcaatggttaccatggcattgtcatgaataatttt
gagtgcgagccagctttttacacctgcgtggaagtgacagcagggacacgactgttttac
cacattgtggaaacggacgaagtgagcacaaaaatcctcatggagtttaacaaaatgaac
ttacccggagaagtgaccttccttccactcagcaagctggacgtcagagacaccgcctac
ccagaaaccaatgacgccatccctatgatcagcaagctgcgctacagtccaaactttgac
aaggcctttaagcacgtgtttgggaagacgttgatttgtcgcagcatggaggtttccacc
cagctggcccgagctttcaccatggactgtataactctagagggagaccaggtgagccac
agaggagcgctgacgggaggttactatgacaccaggaagtctcgcctggagctgcagaag
gacatgaggaaggccgaggaggagctggccgagctggaggccaagctcaacgagaacctg
cggaggaacatcgaacgtatcaacaacgagatcgaccagctgatgaaccagatgcagcag
atcgagacgcagcagaggaagttcaaggcctccagggacagcatcctgtcagagatgaag
atgctgaaggagaagaggcagcagtctgagaagaccttcatgcccaagcaacgtagtctc
cagagcctggaggccagcctccacgccatggagtccaccagggagtcgctgaaggccgag
ctcggcaccgatctcctctcccagctcagcctggaggaccagaggcgtgtcgacgacctc
aacgacgagatccgtcagctacagcaggacaacaggcagctgttaaacgagaggatcaag
ctggagggaatcatgacccgagtagaaacgtatctcaacgagaacctgaggaagcgtctt
gatcaagtcgagcaggagctgaatgagctgcgtgagacagagggcggcacggttctcacg
gcgaccacgtctgagctcgacggcatcaacaaacgagttaaagacactttggctcgatca
gatgacctggacggtctcgtcgacaagacggaagcagagatcaaggagcacataaagagc
atggagcggtggaagaacatcgagaaggagcagaacgacgccatcaaccacgacaccaag
gagctggagaaaatgaccaacaggcagggcatgctgctcaagaagaaggaggagtgcatg
aagaagatcagagaactgggctccctgcctcaggaagcctttgagaagtaccagaccctc
acactcaaacagctcttcaggaagctggagcagtgcaacacggagctgaagaagtacagc
cacgtcaacaagaaggccctggatcagttcgtcaacttctccgagcagaaggagaagcta
atcaagcgtcaggacgagctggatcgtggctacaaatccatcatggagctcatgaacgtg
ttggagctgcgcaaatacgaggccatccagctcacctttaagcaggtgtcgaaaaacttc
agcgaggtttttcagaaactcgtcccgggaggcaaagccacgctggtgatgaagaagggc
gacgccgaaggcagccagtcccaggacgagggagaggggggagaaggcagcgagagggga
tccggatcccagagcagcgttccttcggtggaccagttcacaggagtcggcatcagagtg
tcgttcacggggaagcagggggagatgagggagatgcagcagctgtccggaggtcagaag
tctctggtggctctggctctgatttttgccatccagaagtgtgacccggctcctttctac
ttgttcgatgagatcgaccaggccctcgacgcccagcacaggaaggctgtgtcagacatg
attgtggagctggccggccacgctcagttcatcaccaccaccttcaggccggagctgctg
gagtcggcagacaagttctacggagtcaaattcaggaacaaggtgagtcacatcgatgtg
atcacagcggagcaggccaaagactttgtggaggacgacaccacccatggttaa
DBGET
integrated database retrieval system
