Xiphophorus couchianus (Monterrey platyfish): 114144740
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Entry
114144740 CDS
T05908
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
114144740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114144740
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114144740
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114144740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
PHD_NSD
zf_RING_Vps8
zf-UDP
WWE_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
114144740
NCBI-ProteinID:
XP_027873651
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All DBs
Position
5:complement(1976403..2000742)
Genome browser
AA seq
774 aa
AA seq
DB search
MKEFVKVCSRSLGSGGRTQESNRATSNNMLLASAVVVWEWLNEHGRWRPYSPAVSHQIEA
AIRSSDPRGGSVVLGQVDSRLSPYIIDLQSMHQFRQDTGTIRPVRRTFYDPASAPGQGWQ
WEWENDAGTWTPYDMEVAIAIESAHSRQQTCLDLTPLGFCYLIDFKNMTQVNRQSQRCRR
IQRRADLAYPLVSGPLPVPKGGAVGGGGGLTGALLGVGVSGASMGVGGPVTSNGGLPVLG
LGQPCSCQQCMLVLSVKSGAGGAAGAAAAFQTLNRRALTMQRPKNLAPPALRPLSPSKSA
TLGRGLQQSPAYYQTLPHGLAITKNTASPRRNAQLFAQSLAALTAGTSSMGLSTPSSRPP
PPALPPPQPPASNQNPPSIPPKLSSSSSSATEPVPTATLITPASGVTTPPSPVPSPSPVV
MKPQRTPSSTAACHAPLPQRSSLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSP
VHPALAGITGILMSAAALPVCLTRPPKLVLHPPPVSKSDIKPVPGFNHSCRKTTKKQVRK
GKTPEEVVKKYLQKVKSPPEEDCTICMEPLGGPSGYKGPGVGPVSKAESVGRLAQCGHQY
HFQCLVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPAGKMEYHVIPHSLPGHPDCKSIRII
YNIPPGIQGPEHPNPGKPFTARGFPRHCYLPDSEKGRKVLRLLLVAWDRRLIFSVGTSST
TGESDTVIWNEVHHKTEFGSNLTGHGFPDPGHLDNVLEELRAQGITEEDALVEK
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagtttgttaaagtttgctccagaagtcttggatcaggagggaggacgcaggag
tccaacagggccaccagtaacaacatgctcctggcctccgctgtggtggtgtgggaatgg
ctcaacgagcacggccggtggcggccctacagccccgccgtctcccaccagatcgaggcg
gccatccggagcagcgacccccgcggagggagcgtggtcctcggccaggtcgacagcagg
ctctcgccgtacatcatcgacctccagtccatgcaccagttcagacaagacacaggaacc
atccgtccggtccggaggaccttctacgacccggcctccgccccgggtcagggctggcag
tgggagtgggagaacgacgcgggaacctggacgccgtacgacatggaggtggccatcgcc
atcgagagcgcccacagccgccagcagacctgcctggacctgacgccgctgggcttctgc
tacctcatcgactttaagaacatgacgcaggtgaaccggcagagccagcggtgccggcgg
atccagcggcgcgccgacctggcctacccgctggtgtccggcccgctgcccgtccccaaa
ggaggcgcggtgggaggaggagggggcctgacaggggccctgctgggcgtcggggtatct
ggggccagcatgggggtgggaggccccgtcacctctaacggcggcctgccggttctgggt
ctgggccagccgtgttcctgccagcagtgcatgctggtcctgagcgtgaagagcggtgca
ggaggtgcagcaggcgctgcagcggccttccagactctgaacaggcgggctctaaccatg
cagcgccccaagaacttggccccccccgcgttgcgccccctcagcccgtctaagtcggca
actctggggcggggcctgcagcagagccccgcctactaccagactctgccgcatggcctc
gccatcaccaagaacactgcgtcgccgcggaggaacgcccagctgttcgcccagtcgctg
gccgccctcaccgccggcacctcttccatgggtctctcaacgccttccagcaggccgccg
ccgcctgcgctgccgccgccgcagccgcccgcctccaaccagaacccgccctctattccg
cccaagctctcctcctcctcttcctcagccacagaaccggtaccgaccgccacgctgata
acccccgccagcggcgtcaccacgcccccctccccggtgccgtctccatcgcccgtggtg
atgaagccgcaacgcacgccatcgtcgacggcggcgtgccacgcccccttaccgcagcgg
tccagcttggccgggctgagcaggccggcgctgcagaggatcgccatggcgcagtccaga
gcgctcatagcctcaggcgttcccaccgtgccggtgaagaacctgaatgggtccagcccg
gtccaccccgcgctggccgggatcaccgggatcctgatgagcgccgcggcgctgcccgtg
tgcctgacccggccgcccaagctggtgctgcaccctccgcccgtcagcaagagcgacatc
aagccggtaccgggcttcaaccactcctgcaggaagaccaccaagaagcaggtccgcaaa
ggtaaaactccagaggaggttgtgaagaaatacctgcagaaagtaaaaagtcctccagag
gaggactgcaccatctgcatggagccacttgggggcccatccgggtacaaaggtccgggc
gttggacccgtctccaaggcagagtcggtgggtcggctcgcccagtgcggacaccagtac
cacttccagtgtctggtggcgatgtacaacaacggcaacaaggacggcagcctccagtgt
cccacctgtaagaccatctacggcgtgaagaccggcaaccagccagccgggaagatggag
taccacgtcatcccccactccttaccgggtcaccccgactgcaagagcatccgcatcatc
tacaacataccgccagggatccagggaccagagcaccccaacccggggaagcccttcact
gccagaggcttcccgcgacactgctacctcccagacagcgagaagggacgcaaggttctg
aggctgctgctggtggcatgggaccgccggctcatcttctccgtcggaacctccagcacc
acgggagaatccgacaccgtcatctggaacgaggtccaccacaagacggagttcgggtcc
aacctgacgggccacggattccccgacccgggtcacctggacaacgtgttagaggagctc
cgagctcagggcatcacagaggaagatgcactggtagagaagtga
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