Xiphophorus couchianus (Monterrey platyfish): 114144745
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Entry
114144745 CDS
T05908
Symbol
l1cam
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114144745 (l1cam)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114144745 (l1cam)
04090 CD molecules [BR:
xco04090
]
114144745 (l1cam)
04091 Lectins [BR:
xco04091
]
114144745 (l1cam)
Cell adhesion molecules [BR:
xco04515
]
Immunoglobulin superfamily
L1 family
114144745 (l1cam)
CD molecules [BR:
xco04090
]
Proteins
114144745 (l1cam)
Lectins [BR:
xco04091
]
I-type lectins (Siglecs)
114144745 (l1cam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
V-set
Ig_5
Bravo_FIGEY
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set_CD47
Receptor_2B4
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
114144745
NCBI-ProteinID:
XP_027873661
LinkDB
All DBs
Position
1:14730309..14781030
Genome browser
AA seq
1272 aa
AA seq
DB search
MPHMQRQQVCSRGQSSSHLLPLVLALLSLAALPSRAAVEMSSNWDNKRPPQITTHPESVT
VFSTEDLVMKCEASGVPMPSFSWTKNGKPFDPSADTELNVTKSFGLFAFSTLSKTMDTLK
PYQGKYVCYATNELGTAVSKEAILKTDVAPTQQKQKEKAVTAKSDEGSSIVLKCNPPQSS
MEPIIHWMDQKMHHIQLSKRVVVGKDGNLYFAHLTMDDSRDDYTCNVQYMVTRTILAQEP
ITLKVNPSNSVVRNRRPHMMRPAEAESTYQALRGQTIELECIVQGLPTPEITWLKKEGEL
DESRTFKDMFDRLLRLSDISESDSGEYQCIAKNTQGNAKHTYHLKVEAAPYWKVIPKSLI
YAPGEMVRLDCAAEGTPSPTISWTRNGEEISGTDSRHTVIEKNASLILNTVDFEDTAVYQ
CRASNKHGTILTNTYVYIIELPPQIITDDRKVYAVTEGKSASLECETFGSPKPKVIWERA
SYLLDDPRLQPLPNGGLQIINVSHDDEGPYACSVQNSNLSIIAELEVFNRTVILTPPRNQ
KVQPGNTAIFTCVGLYDTRLRIPQIQWRKNNQKLMESPSDEKYTFDEAEFIIANVEQDDE
GIYTCEIISSLDKVEASATLTLCDRPDPPSLLQISDPRHRAISLRWTPGDDHKSAVLEYV
IEFEDQDLKERGWEELKRVSGNQEHAVLSLWPYMSYRFRVIAINEVGKSDPSKPSEIHNT
PAEAPDNNPENVRSESINPNTLLITWEKMDKRNFNGAEFMYKVLWRRSVGSGPKWHERET
TEPPVIVDDVGNFSAFEIKVQAFNTMGYGPEPDPVIGYSGEDVPLEAPIGVGVELLNSTT
VVVTWAAIEIESVRGHLLGYKIYLRRMGSRSHRHSRRSTEAESTVVEETGPNEKMKIISN
LRPYSRYLLFVAVFNNKAEGPHSEPLPFDTKEGVPGPPTSLILDSPSETEMTLQWTPPAH
PNGILTGYLLQYQRITESDDGPLQKDEIDNPTVTQFTLKGLDRHSQYRFYLRGLTDAGKG
EPIMMTGATTLDGVPPSDISLSVGETSVNVSWEAQKRHRNVGFYIHYFKKNGGWKKSERV
NSSQSFYQLRGLVPGSDYLLRFFYGNASFWETGIKTEGTEMTEVQASIATQGWFIGVVSA
LALLLLILLILCFIKRSKGGKYSVKDKEDGPMDSEARPMKEETFGEYRSLESDLEEKCTA
SQPSLCEDNKMCSEDTLNINGSSALTTELNLDESLASQISRRSEGPEGFSLLNPATIAPT
TNGMPNAITILD
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacatgcagcgacagcaggtttgcagtagggggcagagctcctcccacctcctc
ccccttgtcctagccctcctttccctcgcagccctgcccagccgggcagccgtcgaaatg
tcctccaactgggacaacaaaaggcctcctcagatcaccacacacccggagtctgtcaca
gtttttagcaccgaggacctcgtcatgaagtgtgaagcctctggtgtcccaatgcccagt
ttcagttggactaagaatggaaagccatttgacccaagtgctgacacagagcttaatgtt
acgaaaagctttggtttgttcgccttctccacactcagtaaaactatggacaccctgaaa
ccgtaccaaggcaaatatgtctgctacgccaccaacgagctcgggacggctgtgtcgaag
gaagccatcctcaaaactgatgttgcccctacccagcagaagcagaaggagaaggcggtt
actgcgaagtctgatgaggggagcagcatcgtgctgaaatgtaacccccctcagagctcc
atggagcccatcattcactggatggatcagaagatgcaccatatccagctgagtaagcgg
gttgtggttggaaaggacggcaacctttactttgctcatttgacaatggatgacagccgg
gacgactacacctgcaacgtccagtatatggtgacacgcaccattctggcccaggagccc
atcactctgaaggttaacccctccaattcggtggtgcggaaccgtagaccacacatgatg
aggcctgctgaagccgaaagcacgtaccaggccctcaggggccagacgatagaactcgag
tgcattgtacaaggccttccaactcctgaaattacgtggctgaagaaggaaggtgagctg
gatgaatcccggacattcaaagacatgtttgaccgactcctgcgcctcagtgatatctct
gaaagtgacagtggcgagtaccagtgcatagccaagaacacacaagggaatgccaaacac
acctaccatctgaaagtagaagccgctccatattggaaagtgatcccaaagagtctgatc
tatgctccgggtgaaatggtaaggctagactgtgcagcagagggtacgccctctccgacc
atcagctggaccaggaacggagaggagatctcaggaactgactccagacatactgtgata
gagaaaaatgcatcattgatcctaaacactgtcgactttgaagacacagctgtctaccag
tgccgggcctccaacaaacacggcaccatcctcaccaacacctatgtatacatcatcgaa
ctgcctccgcagatcattacagatgaccggaaagtgtacgctgttactgaaggcaagagt
gcttcgctggagtgtgagacctttggctctcctaaacctaaagtcatatgggagcgagca
tcgtaccttctggatgatcccagacttcagccacttcccaatggagggcttcagatcatt
aatgtcagccatgacgacgaaggtccctacgcctgctcagttcaaaactccaacttgtca
atcatagccgagctggaggtgttcaacaggacagtgatcctgacaccgcctaggaaccag
aaggtgcagcctggaaacacagcaatctttacatgtgtgggcctttatgatacaagactg
aggattcctcaaattcagtggagaaagaacaaccagaaactgatggaatcccccagtgat
gaaaaatacacatttgatgaggcagaattcataatcgctaatgtggaacaagatgatgag
ggcatttacacctgtgagatcatctcttctctggacaaggtcgaagccagcgccacgctc
actttatgtgatcgtccagaccctccaagcctcctccagatctctgatcccaggcatcgt
gcaatctctctcaggtggactcctggagatgaccacaagagcgctgttctagagtatgtc
atagagtttgaggaccaagatttgaaggagaggggttgggaagagctgaagagagtcagc
ggcaaccaggagcacgctgtcctctccctctggccttacatgtcctaccgttttcgggtc
atcgctatcaatgaggtgggaaagagtgaccctagcaaaccctctgaaatccacaacacg
ccagccgaagctccagacaacaacccagagaatgtcaggagtgagtccataaacccaaat
actctcctcatcacctgggagaaaatggacaaacgtaatttcaatggagctgaattcatg
tacaaggtgctgtggagacgatcagtgggcagtggacctaagtggcacgagagggaaaca
accgagcccccggtcatcgttgatgatgttggcaatttctctgcttttgaaataaaagtc
caggccttcaatacaatgggttacgggccggagccagaccccgttattggctactcaggg
gaggatgttcccctggaagctccgataggcgtgggagtcgaactactcaacagtactacg
gttgtcgtgacctgggcagctatagaaatagagtcggtgagaggacacctgctgggatac
aagatttacctgagaaggatgggctccaggagccaccgccatagccggagatccacggag
gctgagagcactgtggtggaagagactggtcccaacgagaaaatgaagatcatcagtaat
cttagaccgtactccagatatctcctgtttgttgccgtcttcaacaataaggcggaggga
ccgcactctgagcctctgcccttcgacacaaaagagggagtacccggtcctcccacatcc
ctgatccttgacagcccatcagagacagaaatgaccctgcagtggacgcccccagcccac
cctaatgggatccttactggatacctgcttcagtaccagcgcattacagagagcgatgac
ggccctttgcagaaggatgagatagataaccccacagtcacccagtttaccttgaagggc
ctggaccgccacagccagtaccgcttctacctgaggggcctcactgatgctgggaaggga
gagcccattatgatgacgggggccaccacacttgatggagttcctccctcggacatcagc
ctgtctgtgggggaaacctctgtaaatgtcagctgggaagctcagaagagacacaggaat
gttggtttctacatccactacttcaaaaagaatggcggctggaaaaagtctgagagggtg
aactcttctcagtctttctaccagcttcggggcctggttcctggttctgattatcttctg
cgcttcttctatgggaacgcctcattctgggagactggcatcaagacagaaggaacagaa
atgacagaggtgcaggccagcattgcgacgcagggctggttcatcggtgttgtgagtgcc
cttgcgttgctgttgctgatattgcttatcctctgcttcatcaagaggagtaaaggaggg
aaatactcagtgaaagataaagaggacggcccgatggactcagaggcacggccgatgaag
gaggaaacgtttggagagtacagatctcttgaaagtgatctggaggaaaagtgcacagcc
agccagccgtccctgtgtgaagacaacaagatgtgcagcgaggacaccctgaacattaac
ggcagcagtgctctgaccacagagctcaacttggatgaatctctggccagccagatcagt
cgtcgaagtgaaggtccggaggggttctccctgctgaaccccgcgaccattgccccaacc
actaatggcatgcccaatgcaatcactatcctcgattaa
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integrated database retrieval system
