Xiphophorus couchianus (Monterrey platyfish): 114144749
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Entry
114144749 CDS
T05908
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114144749 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114144749 (dhx15)
03009 Ribosome biogenesis [BR:
xco03009
]
114144749 (dhx15)
Enzymes [BR:
xco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114144749 (dhx15)
Spliceosome [BR:
xco03041
]
Complex A
U2 snRNP components
U2 related factors
114144749 (dhx15)
Complex B
114144749 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
114144749 (dhx15)
Ribosome biogenesis [BR:
xco03009
]
Eukaryotic type
90S particles
Helicases
114144749 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
Flavi_DEAD
SRP54
AAA_25
Apis_Csd
nSTAND3
AAA_29
Atrophin-1
AAA_7
Motif
Other DBs
NCBI-GeneID:
114144749
NCBI-ProteinID:
XP_027873662
LinkDB
All DBs
Position
5:16285303..16296012
Genome browser
AA seq
762 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSDGRDRDRDRDREDRSRDRDRDRDRDRDRDRDRDTKLPAAL
SNSMPLMSSVPPVKQMNMHQQINPFTNLPHTPRYYEILKKRLQLPVWEYKESFTDIITRH
QSFVLVGETGSGKTTQIPQWCVDMVRALPGPKRAVACTQPRRVAAMSVAQRVADEMDVML
GQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM
GVLKEVVRQRQDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYLE
AAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREVDDLGPDVGDIKIIPLYSTLP
PQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV
ESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQ
LKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAK
MVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHA
FKQNHEANQWCYDNFVNYRSLMSADNVRQQLSRIMDRFSLPRRSTEFTSRDYYINIRRAL
CTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDI
KPEWLVKIAPQYYDMSNFPQCEAKRQLERIIAKLESKEYTQY
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagacaccgtttggacttgggcgatgattactcctccagtaagaaacggtct
gacgggagagacagagaccgcgacagagaccgtgaggaccgttccagagacagggatcga
gacagagatcgcgacagggacagagaccgggacagggacaccaagttgccggccgctctc
tctaacagcatgccgttgatgtcgagcgtaccccctgtcaagcagatgaacatgcaccag
cagattaacccattcaccaatctgccacacacgccacgctactacgagatcctgaagaaa
aggctacagcttccggtgtgggagtacaaagaaagcttcaccgacatcattacacgccat
cagagctttgtccttgttggagagactggctctggaaaaacaacacagattcctcagtgg
tgtgtggacatggtgagggccttgcctggtcctaagcgggccgtagcttgtactcagcca
aggagagttgctgccatgagtgtggctcaaagggttgcagacgaaatggatgtcatgctt
ggacaggaagtcggctactccatcagatttgaggactgcagctctgccaagactatatta
aaatacatgacagatggtatgttactgagagaggctatgaatgatcctctgctggagcga
tatggtgtgatcattctggatgaggcccacgagcgaactctggccacagacatcctgatg
ggcgtgttaaaggaagtggttcgtcaaagacaggatctgaaggtaattgtgatgagtgcc
accctggatgcaggaaagttccaagtgtacttcgacagctgccctctgctgaccattcct
ggacgcacacatcctgtagagatcttctacacccctgaaccggagcgggactacctggag
gcagctattcgtaccgtcattcagattcacatgtgtgaagaggatgaaggtgacgtcctt
ctgttcctcacaggtcaagaggaaattgatgaagcctgtaagagaataaaacgagaagtt
gacgaccttggccctgacgtcggagacatcaaaatcattccactgtattccacgttgccc
ccgcagcagcagcagaggatctttgagccacctcctccaagaaagccaaacggcgctatt
gggagaaaggttgttgtgtcaacaaatatcgctgagacgtcgctaacaattgatggtgtt
gtgtttgtcattgaccccggatttgccaaacagaaggtgtacaatccccgcatcagagtt
gagtctctgctagtcacagccatcagtaaagcttcagcacagcagagggcaggaagagcc
ggcagaacacgcccagggaaatgttttcgcctctatacagagaaggcctacaaaacagaa
atgcaggataatacatatccagagattcttcggtccaatttgggatctgttgtgctgcag
ttgaagaagttgggcattgatgatcttgtccactttgacttcatggaccctccagctcct
gaaacgctaatgagggctcttgagctgctcaattatctggccgctctcaacgatgatggt
gacctgactgaacttggctccatgatggcagaattcccgctggatcctcagctggccaag
atggtcatagcaagctgcgagtttaactgctccaatgagatcctctccatcactgccatg
ctgtcagtcccacagtgttttgtccgtcccacggaggctaagaaggcagcggacgagtcc
aagatgagatttgctcacattgatggagaccacttgacgctgctcaatgtctatcacgcc
ttcaaacaaaaccatgaagctaatcagtggtgttatgacaactttgtcaactaccgctcg
ctgatgtctgctgacaatgtacgtcagcagctgtccaggattatggaccgcttcagtctg
cctcggcgtagcacagagtttaccagcagagattactacatcaatatccgacgagcgctc
tgcactggcttcttcatgcaggtggctcatttggagcgcacaggccattacctcacagtg
aaagacaaccaggtggtccagctgcacccatccacagtcctggaccacaaacctgagtgg
gtgctctacaatgaatttgttctcaccaccaagaactacatccgcacttgcacagacatc
aaaccagagtggttggtgaagattgcaccacagtactatgacatgagtaactttccacaa
tgtgaagctaaaagacagctggagcgaattattgccaaactagagagcaaagagtacacc
cagtactga
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