Xiphophorus couchianus (Monterrey platyfish): 114144783
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Entry
114144783 CDS
T05908
Name
(RefSeq) peroxisome assembly factor 2-like
KO
K13339
peroxin-6
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
114144783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114144783
Membrane trafficking [BR:
xco04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
114144783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
AAA_33
DUF815
RuvB_N
AAA_22
nSTAND3
Vps4_C
AAA_18
TIP49
AAA_19
TsaE
AAA_30
AAA_7
RNA_helicase
Cytidylate_kin
NPHP3_N
Mg_chelatase
AAA_28
AAA_25
PEX6_4th
AAA_17
AAA_14
IstB_IS21
AAA_24
Parvo_NS1
PhoH
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
114144783
NCBI-ProteinID:
XP_027873761
LinkDB
All DBs
Position
5:9053955..9069583
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AA seq
1052 aa
AA seq
DB search
MAVQIQLSCLENFPAHISPLDVLALESDLESVFQHGTNQPTVLFTPNQPQLCDRAGILLQ
VHPTTMEEISSAGGSSCLTADSESGLRVRFFTSQYFLKHFRFQRCSYAGTIRPLEPVSLD
RVVLGARSRQSLCWAGREQFTGGLLELCHLGQEPLARQGDPFLLSHHPLFGDDTGQVQQR
LLELLVLECSPVKQGRITANTSLVLTDCWDCADPPGPSLPGRSLGLSVSDFAHYADSVGS
RSLLDSWSSLGSGLPDVLQALECRLDVRVVDTQRWYWVKGKQGALVDTDSCMFLSKQLLL
RLGLFNHEWVRLSRPAGSGRGLGEEVDVRAAPCRERLVSAVVVDLGPELTIHDDVGFISA
TLWFNMTEGEKLPVKSCTLRMKRWKSALEDLRQRSDSYCLSASLPFATELHIQPVSSPQH
SNLSFPDNLLAEHFTTPRMISQGDILTVPAENHPELLEYNAEGIRRCPVLYFKVQKALPS
ANGGGEALLADEAHTSLYMGTFTNSPVPCCCVDEESLWRSLAPSGLNKTVDLLSDLILPH
LQHRESLSACTVILQGPAGSGKMTVVRAASRRLHLHLLKVNCVTVCSDTPAAAEVKLSSV
FQRANALQPCVLLLRNLHLLLKGAAEDNGRVKAVLCQLLGSAPTSVVVVATVCRARDLSI
MGAFIHQVEMESPTEEQRLAMLVGLSRELHLGRDVNLERLSKLTAGFVLGDLSALLTEAG
RAACRRLIHTCGGSLQEDLCSSGVTIMKQDFCCALETLQSAQSKAIGAPKIPNVCWEDVG
GLEHVKREILDTVQLPLQRPELLSLGLNRTGVLLYGPPGTGKTLLAKAVATECAMTFLSV
KGPELINMYVGQSEENIREVFHKARSAVPCVVFFDELDSLAPNRGRSGDSGGVMDRVVSQ
LLAELDSLQSSAGVFVIGATNRPDLLDQSLLRPGRFDKLVYVGINEDRVSQLQVLQAILR
KFQLDPAVNLQDVVDRCPTRMTGADLYALCSDAMTAAIKRKIQQINDGLDSEDSPVLLSA
EDFSSALKNFRPSVSEAELLRYRSIHQELSGQ
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacagattcagttgagttgtttggagaattttcccgcacacattagtcctctg
gatgttctggccctggaatctgacctggaatctgttttccaacatggcaccaaccagccc
accgtcctcttcaccccgaaccagcctcagctctgtgacagggcgggcattttactgcaa
gttcacccgaccaccatggaggagattagcagcgccgggggtagtagctgtctaactgcc
gacagcgagtccggactccgtgtccgcttcttcaccagccagtatttcctgaaacacttt
cggttccagcggtgttcatacgccggaaccatcaggcctctggagccggtcagcctggac
agggtggtactcggagcccgcagcaggcagagcctctgctgggcaggaagggagcagttc
accggtggactgctggagctctgtcacttggggcaggagccgctggcccgtcaaggagac
ccgtttctcctgtcccatcatccactgtttggagacgacacgggacaggtgcaacagcgc
ctcctggagctcctggtgctggaatgcagtccagtgaagcaggggagaatcacagccaac
acctctctggtcctgaccgactgctgggactgcgcggaccctccaggcccgtcgttgcca
ggcagatctctcggactgagcgtgtcagactttgctcattacgccgacagcgttgggtct
cggtctctcctggacagctggagtagcctgggctctgggttgccggacgtcctgcaggcc
ttggagtgcaggttagacgtgcgcgtggtggacactcagcgatggtactgggtcaaaggc
aagcaaggagcacttgtggacacagacagctgcatgttcctgagcaagcagctgcttctg
aggctggggctgttcaaccatgagtgggtgaggttgtccaggcctgcagggagcggcaga
gggctgggggaagaggtcgatgtcagagctgccccctgcagagagcgcctggtctctgca
gtagtggtggatctgggtccagaactgacgatccacgacgatgtgggtttcatctcagcg
actctgtggttcaatatgacagaaggagaaaagcttcccgtgaagagctgcacgctaagg
atgaagaggtggaaatcggctcttgaagatctcaggcagcgctctgacagttactgcctc
tcagcttctctgccgtttgccactgagcttcacatccagccggtcagctctccgcagcac
agcaacctcagcttccccgacaacctgctggccgagcatttcaccacaccacgcatgatt
tcacagggagacatcctgacggttcctgctgaaaaccatccagagctgctggaatacaac
gcagaggggattcgcaggtgtccggttctgtactttaaagttcagaaggctctcccatct
gctaacggagggggagaagctcttctggctgatgaggctcacacctcactctacatggga
acattcactaacagccctgttccctgctgctgtgtggatgaagagtctctctggagaagc
ctggctccttctggcctcaacaagaccgtcgacctcctcagtgacctcatcctgcctcac
ctgcagcacagagagtctctgtctgcttgcaccgtcatcctccaaggtcctgcaggcagc
ggaaagatgactgtggtcagagcggcgagtcgcagactccacctccacctgctgaaggtg
aactgtgtgactgtgtgttcagacactcctgcagctgcagaagtgaaactgtcgtcggtg
ttccagcgagccaacgcgctgcagccgtgtgtcctgctgctcagaaacctgcatctcctg
ctaaaaggagctgctgaagacaatggccgggtcaaggcggttctgtgccagctgctcggc
agcgcccccaccagtgtggtagttgtggccacggtttgcagagctcgggatctctccatc
atgggggcatttatccaccaggtggagatggagagccccacagaggagcagcggctcgcc
atgttggtaggtctgagtcgagagcttcatctggggagagacgtcaacctggagcgactg
tccaagctaacagcaggttttgtgctgggagatctgagcgctcttctgactgaagctgga
agagctgcctgcaggaggctgatccacacctgtggtggcagcctgcaggaggacttgtgc
tccagcggagtgaccatcatgaaacaggacttctgctgcgctctggagacgctgcagagc
gcccagtctaaagccatcggagccccaaagatccctaatgtgtgctgggaggacgttgga
gggttggagcatgtgaagagggaaatcctggacactgtgcagcttcctctgcagcgtcct
gagctcctgtctttgggtctgaaccgaaccggagtcctgctgtacggaccgcccggtaca
ggaaaaaccctgctggccaaggctgtggccaccgaatgcgccatgaccttcctcagtgtc
aaaggtccagagctcatcaacatgtatgtgggtcagagtgaagaaaacatccgagaagtg
tttcacaaagcgcgctcggctgttccctgtgtcgtcttctttgacgagctggactctctg
gcgcccaacagggggcgcagtggagactctggaggagtgatggacagagttgtgtctcaa
ctgctggctgaactggactcgctgcagtcgtctgccggagtttttgtgatcggagccaca
aaccgtccggatctgctggaccagtcgctgctcagacccggaaggtttgataaactggtc
tatgttgggatcaatgaggaccgcgtctcccagctgcaggttctccaggccatcctcaga
aagttccagttggatccggctgtgaatctgcaggacgtggtggatcgctgcccgactcgc
atgaccggcgccgatctgtacgctctgtgctcagacgccatgacggcggccatcaagaga
aaaatccaacagatcaacgatggtctggattcagaggactctcctgtcctcctctctgca
gaggatttctcttctgctctgaaaaactttagaccttctgtttccgaagcggagctgctg
cggtaccggagcattcaccaggaactctccggacagtag
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integrated database retrieval system
