KEGG   Xiphophorus couchianus (Monterrey platyfish): 114144905
Entry
114144905         CDS       T05908                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-A-like
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144  Endocytosis
xco04517  IgSF CAM signaling
xco04530  Tight junction
xco04810  Regulation of actin cytoskeleton
xco05100  Bacterial invasion of epithelial cells
xco05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xco00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    114144905
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    114144905
  09144 Cellular community - eukaryotes
   04530 Tight junction
    114144905
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    114144905
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    114144905
   05100 Bacterial invasion of epithelial cells
    114144905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xco04131]
    114144905
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xco04812]
    114144905
Membrane trafficking [BR:xco04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    114144905
Cytoskeleton proteins [BR:xco04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     114144905
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_THOC3 WD40_WDHD1_1st WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WDR55 WD40_Gbeta Beta-prop_WDR35_TULP_N Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_WDR3_2nd Beta-prop_HPS5 Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st EIF3I Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_WDR75_1st RMC1_N PEP5_VPS11_N Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Tricorn_2nd Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_2nd Beta-prop_SPT8 SH3_3
Other DBs
NCBI-GeneID: 114144905
NCBI-ProteinID: XP_027873937
LinkDB
Position
5:39485404..39491808
AA seq 380 aa
MAYHSFLLEPISCHAWNKDRTQIALCPNNHEVHIYKKDGTKWTKIHELKEHNGQVTGIDW
APDSNRIVTCGADRNAYVWTLKEGSWKPTLVILRINRAARCVKWSPKENKFAVGSSSRLI
SICYFEQENDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGEVLFESGGTGGAAPSSSGGGGWVHSVCFSHSGNRLAWTSHDSTVSVAE
GGKTGTVSSLSSETLPLLCVTFITENSLVAAGHDCYPMLYVYDGANASLTFGGKLDVPKQ
AASKDISARERFKNLDRRASETQSTDKDLNTLHKNSISQMSVLEGGRNQCTKFCTTGMDG
GMGIWDVKSLESAMKNLKIV
NT seq 1143 nt   +upstreamnt  +downstreamnt
atggcgtaccatagcttccttctggaaccaattagctgccatgcgtggaacaaagatcgg
acccagattgccctgtgccccaataaccatgaagttcacatttacaagaaagatggaacc
aagtggaccaaaatccacgagctgaaggagcacaatggacaggtaacaggtattgactgg
gctccagacagtaaccgcatcgtcacttgtggtgctgatcgtaacgcttacgtgtggacc
ctgaaggagggatcatggaagcccaccttggtcatcttgaggatcaaccgggctgctcgc
tgtgtgaagtggtcaccaaaggagaacaagtttgccgttggcagcagttcgaggctcatt
tcaatctgctactttgagcaggaaaatgactggtgggtgtgcaagcacatcaagaagccg
atccgttctactattctgagtctggactggcatcctaataatgtgctcctggctgctgga
tcctgtgatttcaaatgcagggtgttctcagcctacataaaggaggtggaggagaagcct
ggccccactccttggggcagcaagatgccatttggggaggtgctgttcgagtctggaggt
actggaggtgctgctccgtcatcaagtggaggtggcggctgggtgcacagcgtgtgcttt
tctcattctggcaaccgtttggcctggacgtcccacgactccacagtgtcagtagctgag
ggaggaaagacgggcacggtgagcagcctgagctcggaaactcttcctctcctgtgtgtt
accttcatcactgagaacagcttagttgctgctggtcatgactgttacccgatgctgtat
gtatatgatggtgcaaatgccagcttgacatttggtggcaagttggatgttcccaagcag
gcagcttcgaaggacatcagtgccagggaacgctttaagaacctggaccgtcgagcctct
gagactcagagcactgacaaggacctgaacacgctccacaagaacagcatcagccaaatg
tcagtgctggagggaggaagaaaccagtgcaccaaattctgtaccactggcatggatgga
ggaatgggcatctgggatgtgaagagcctggagtctgctatgaagaatttgaagatcgtg
tga

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