Xiphophorus couchianus (Monterrey platyfish): 114144905
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Entry
114144905 CDS
T05908
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-A-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144
Endocytosis
xco04530
Tight junction
xco04810
Regulation of actin cytoskeleton
xco05100
Bacterial invasion of epithelial cells
xco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114144905
09144 Cellular community - eukaryotes
04530 Tight junction
114144905
09142 Cell motility
04810 Regulation of actin cytoskeleton
114144905
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114144905
05100 Bacterial invasion of epithelial cells
114144905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114144905
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114144905
Membrane trafficking [BR:
xco04131
]
Others
Actin-binding proteins
Arp2/3 complex
114144905
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
114144905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
EIF3I
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
RMC1_N
PEP5_VPS11_N
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
SH3_3
Motif
Other DBs
NCBI-GeneID:
114144905
NCBI-ProteinID:
XP_027873937
LinkDB
All DBs
Position
5:39485404..39491808
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AA seq
380 aa
AA seq
DB search
MAYHSFLLEPISCHAWNKDRTQIALCPNNHEVHIYKKDGTKWTKIHELKEHNGQVTGIDW
APDSNRIVTCGADRNAYVWTLKEGSWKPTLVILRINRAARCVKWSPKENKFAVGSSSRLI
SICYFEQENDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGEVLFESGGTGGAAPSSSGGGGWVHSVCFSHSGNRLAWTSHDSTVSVAE
GGKTGTVSSLSSETLPLLCVTFITENSLVAAGHDCYPMLYVYDGANASLTFGGKLDVPKQ
AASKDISARERFKNLDRRASETQSTDKDLNTLHKNSISQMSVLEGGRNQCTKFCTTGMDG
GMGIWDVKSLESAMKNLKIV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccatagcttccttctggaaccaattagctgccatgcgtggaacaaagatcgg
acccagattgccctgtgccccaataaccatgaagttcacatttacaagaaagatggaacc
aagtggaccaaaatccacgagctgaaggagcacaatggacaggtaacaggtattgactgg
gctccagacagtaaccgcatcgtcacttgtggtgctgatcgtaacgcttacgtgtggacc
ctgaaggagggatcatggaagcccaccttggtcatcttgaggatcaaccgggctgctcgc
tgtgtgaagtggtcaccaaaggagaacaagtttgccgttggcagcagttcgaggctcatt
tcaatctgctactttgagcaggaaaatgactggtgggtgtgcaagcacatcaagaagccg
atccgttctactattctgagtctggactggcatcctaataatgtgctcctggctgctgga
tcctgtgatttcaaatgcagggtgttctcagcctacataaaggaggtggaggagaagcct
ggccccactccttggggcagcaagatgccatttggggaggtgctgttcgagtctggaggt
actggaggtgctgctccgtcatcaagtggaggtggcggctgggtgcacagcgtgtgcttt
tctcattctggcaaccgtttggcctggacgtcccacgactccacagtgtcagtagctgag
ggaggaaagacgggcacggtgagcagcctgagctcggaaactcttcctctcctgtgtgtt
accttcatcactgagaacagcttagttgctgctggtcatgactgttacccgatgctgtat
gtatatgatggtgcaaatgccagcttgacatttggtggcaagttggatgttcccaagcag
gcagcttcgaaggacatcagtgccagggaacgctttaagaacctggaccgtcgagcctct
gagactcagagcactgacaaggacctgaacacgctccacaagaacagcatcagccaaatg
tcagtgctggagggaggaagaaaccagtgcaccaaattctgtaccactggcatggatgga
ggaatgggcatctgggatgtgaagagcctggagtctgctatgaagaatttgaagatcgtg
tga
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