Xiphophorus couchianus (Monterrey platyfish): 114144938
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Entry
114144938 CDS
T05908
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114144938 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114144938 (sart1)
04121 Ubiquitin system [BR:
xco04121
]
114144938 (sart1)
Spliceosome [BR:
xco03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
114144938 (sart1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
114144938 (sart1)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114144938 (sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
HA
Motif
Other DBs
NCBI-GeneID:
114144938
NCBI-ProteinID:
XP_027873998
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All DBs
Position
5:complement(37793238..37796204)
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AA seq
771 aa
AA seq
DB search
MGSSKKHKEKSRDKDAEDRRREHKKHRHKERERDVSDRDKDRRKRSRSREKSRRESHSKA
ERGPAEPRVKREKVDPGYEENGAEIQPQSTSGDGSLSIEETNKLRAKLGLKPLELNEGKK
ELGTKEAPMVAETINPVLIRQQKEMREKLAAMKEKRLLNQKLGKVKAIGDDDWLDDTAGW
VERSRTLAKEKEMAEKRAKLLEEMDEEFGVSSLVEEEFVQSKRDSYSSQDLKGLKVQHKV
DSFIEGQTVVLTLQDKGVLEEEEDVLVNVGLVDKEKAEKNVELKKKKPDYKPYEEEESVD
DMVTFKPHTVLSKYDEEIEGEKKKSFRLGNWGFADGERERELQAMKETLRNQAQSLDMPA
LTIASEYYTPQEMVGFKKTKRKVKKIRKKEKVTISDELLDDTRTSDFGSRARGRGRRQAE
EEQQESEEKVKDGGSWPHELPRMSDDIRTAEMDISDEDDYVPPEPAVIEEDEAEQELQKQ
LEKQRKLRQKQLLKDSGEKVAAQIKVLAKGDDDLDPEKKNNIVFNATSEFCRTLGDIPTY
GLSGNREDQEDIMDFEHEEEKDDGGGSDSEIDENIGWSTVNLDEEQQQVDFSTASATILD
EEPIVNSGLAAALKLCTNKGLLDTQMQKVARVKAPKGALPNDNYCIEDKMGFDDKYSRRE
EYRGFTQEFKEKDSYKPDVKIEYVDESGRKLTPKEAFRQLSHRFHGKGSGKMKTEKRMKK
LEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANNITK
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgggctcttctaaaaaacacaaggaaaagagccgcgacaaggacgcagaggatcgtcgt
cgcgaacataagaaacatcgtcacaaggagagagaaagagatgtgtcggaccgtgataaa
gacagacgaaagcgctccagatccagagaaaagagcaggcgggagagccacagcaaggcg
gaaagaggccccgcggagccccgagtaaagagggagaaggtggaccctggttatgaggag
aacggcgcggagatccagccccagagcaccagcggagatggctccctcagcatagaggaa
acaaacaaactgcgcgctaagctgggcctgaagcccctggagctgaacgagggcaaaaag
gagctggggaccaaggaggcgccgatggtggcggagaccatcaaccccgttctgatccga
cagcagaaggagatgcgagagaagctcgccgctatgaaagaaaagcgcctgctcaatcaa
aaactgggtaaagtcaaagcaatcggcgacgatgactggctggacgacacagccggttgg
gtggagagaagcaggacgctggccaaagagaaggagatggcagagaagagagccaaactc
ctggaagagatggacgaagagtttggagtcagcagcctggtggaggaggagtttgtccaa
agcaagcgggactcttattcctcacaagatctgaagggtctcaaagtgcagcacaaggtg
gactccttcatcgagggccagaccgttgtcctgaccctgcaggacaaaggtgtgctggaa
gaggaggaagatgtgctggtaaacgtgggactggtggacaaggagaaagctgaaaagaat
gtggagctgaagaagaagaagcccgactataaaccctatgaggaagaggagagcgtggac
gacatggtcaccttcaagccgcacactgtgctctcaaagtacgatgaagaaatcgagggc
gagaagaaaaagagcttccggttgggcaactggggctttgcggacggggagcgagagcgc
gagcttcaggcgatgaaagaaacgctgcggaatcaggctcagtccctggatatgcctgct
ctcaccatcgcctctgagtactacacgcctcaggagatggttggcttcaagaagacgaag
cgcaaagtcaaaaagatcaggaagaaagagaaggtgacgatctcagacgaacttctggac
gacacccgcacctccgacttcggctccagggcgcgaggcagaggccgccgacaggcggag
gaggagcaacaggaaagcgaagagaaagttaaagatggcggcagctggccgcatgaactg
ccccgaatgtccgacgacatcaggacggcagagatggatataagcgacgaagatgattac
gttcctcctgagccggctgtgattgaggaggacgaggcggagcaggagctccagaagcag
ctggagaagcagaggaagctgaggcagaagcagctcctcaaagactctggggagaaggtg
gcggcgcagatcaaagtcctggctaaaggcgacgacgacctcgatccagagaagaagaac
aacatagtcttcaacgccacctcggagttctgcagaactctgggggacattccgacgtac
ggactgtctggaaaccgggaggaccaggaggatatcatggactttgagcacgaagaagaa
aaagacgacggcggaggttcagattctgaaattgacgagaacatcggatggagcaccgtt
aacctggacgaagagcagcaacaggtggacttctccacggcctccgccaccattctggac
gaggagcccatcgttaactccggccttgcggctgcattgaagctgtgcaccaacaaaggc
ctgctggacacccagatgcagaaggtggcccgcgtcaaggcaccgaagggggccctgccc
aacgacaactactgcatcgaggacaagatgggcttcgacgacaagtacagccgcagagaa
gagtacagaggcttcacgcaggaattcaaggagaaggacagctataagcccgacgtcaag
atcgagtacgtggacgagtccgggcggaagctgacgccgaaggaagctttcagacagctg
tcgcaccgattccacgggaagggttctggaaagatgaagacagagaagaggatgaaaaag
ttggaggaagaggcgctgctgaagaagatgagcagcagcgatactcctctcgggacggtg
gctttgctccaggagaagcagaaatctcagaaaaccccgtacatagtgcttagtgggagt
gggaagagcatgaatgcaaacaacatcactaaatga
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