Xiphophorus couchianus (Monterrey platyfish): 114144981
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Entry
114144981 CDS
T05908
Symbol
arhgef38
Name
(RefSeq) rho guanine nucleotide exchange factor 38 isoform X1
KO
K20711
Rho guanine nucleotide exchange factor 38
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114144981 (arhgef38)
Membrane trafficking [BR:
xco04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
114144981 (arhgef38)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
BAR
SH3_9
SH3_1
Motif
Other DBs
NCBI-GeneID:
114144981
NCBI-ProteinID:
XP_027874072
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All DBs
Position
5:16989740..17005103
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AA seq
802 aa
AA seq
DB search
MDPREAGGGEKDKERQIKRKNRPVFLRYLERRKTDTIVVDDMAKGDINLGTLVRRSQSDK
TEYSAKIKDKLMPLDLSALPSPVLDVEEIWSRKMSRRAKVIKELVQTEKDYLTDLELCIR
EVVQPLRVLQVVDVDRLFTNMETVCEVSAALLNRLHVAMSDPDPEAVVIGEVFIQAKAAL
EDVYKIYCYHHDDANMSLKAYEKEEQIKQHFTICILALKKIYDQEGKPNLLDMGSLLIKP
VQRIMKYPLLLGELWQATPEDHIDYLPLQEALTASKIINVNINEFRRRKDIVMKYKRLEN
DEGTLRGKLNKINIHSLRKKGDRFAGYLKILTGVEPQVRDEVFDKEEKLFRSLEKAVRQL
AKNVNCYVQYTQEMVPVAVQNMKDMENIIMDPSKADTNGSSHKNGKDPYKYFKERMEELV
LLPLTSLQGMFTAPQKLIQKRYDKLLDYCCRLERSSSFASSSSTSTVSSTASPASDVPPG
PAKRDYEAINALLVDELQRFNMAAYTILTNCVLCLVALLRGLMVCALVGAPAVHQLPPPL
SNMVEVQNSIMDELNNLTFVKDNAQKLMERKVSFERQRDKKTVVQEVQHQTEEQRAWLLA
EYPPNRLYQLKRKCNGCQEQDLSLLEGELVALLEDTDPLGSSSRWLVHNGGDKGYVYSTF
LKQYNPLRDSQRANQKAKEQQQPPVITYEDFDDLSLFVSPSSSSMRSLSLNTTDSSSTLS
GLQGELENAEELEESVDGDTQQYYAVYAFHARCEQELSLQEYQHVRILQFCDLGGNKQWW
LAEANGQKGYVPANYLGRMSYA
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggatcccagggaggccggtgggggtgagaaggacaaggaaagacagataaaaagaaaa
aaccggcctgtgttcctgcggtacctggagaggagaaagacggacactatagtggtcgat
gacatggccaaaggtgacatcaacctggggacgctggtgaggaggagtcagtctgacaag
acggagtacagcgctaaaattaaagacaaattgatgccacttgacctgtcagctcttccc
tctccggtgctggacgtggaagagatttggtccaggaagatgagccgcagggcgaaagtg
ataaaagaacttgtgcaaactgaaaaggactacctcactgacttggaactgtgcatcaga
gaagtcgtccagcctctgcgagtgttacaggttgttgacgtagaccgacttttcaccaac
atggagacggtgtgtgaggtgtctgccgctcttcttaacagactgcacgtggccatgtct
gacccagatccagaagcagtcgtcataggggaagtgtttattcaggcaaaggcagcttta
gaagatgtatataagatttattgttaccaccatgacgatgccaacatgtctttgaaagcc
tatgagaaggaggaacagataaagcagcattttactatatgcatcttagcattgaaaaaa
atctatgaccaagaaggaaaacccaatttgttggacatgggctccctgctgatcaaacca
gtccagaggatcatgaagtacccattgcttctgggggaactttggcaggccacccctgaa
gaccacattgactatctgcccctgcaggaggcgctcaccgcttccaagatcataaatgtt
aacatcaatgagttcaggagacggaaagacatagttatgaagtacaagaggttagaaaac
gatgaaggcacgctgaggggcaagctaaacaagattaacatccactctctccggaagaaa
ggagacaggtttgcaggatatctgaagattctcactggagtagaaccacaggtgagagat
gaagtgtttgataaggaagagaaactgttcaggagtttggaaaaagctgtgaggcaactg
gccaagaatgttaactgttatgtgcaatacactcaggagatggtgcctgttgctgttcag
aacatgaaggacatggaaaacattattatggatccaagcaaagcagacacaaatggctcg
tcacacaagaatggcaaagatccttataagtactttaaagagcgaatggaggagttggtt
ctgctgcccctcacctctctgcagggcatgttcacggctccgcagaagctcatccagaag
cgttatgacaagctgctggactactgctgccgcttggagcgctcctcctcttttgcttcc
tcatcctccacctccactgtgtcctccaccgcctcaccagcgtcagatgtgcctcctggt
cctgccaagagagactatgaagccatcaatgctttgctagtggatgagttgcagaggttc
aacatggcggcttatactatcctgacaaactgcgtgctgtgtctggtggccctgctcaga
ggactgatggtttgcgctttggttggagctccggctgttcaccagctgcctcctccattg
tcaaacatggttgaagtgcagaacagcattatggatgagctgaacaatctgacatttgtg
aaggataatgctcagaagttaatggagagaaaagtcagctttgagaggcaacgagacaaa
aaaacagtggtgcaggaggtgcagcatcaaacagaggaacagcgcgcctggctgctggcg
gagtacccaccgaaccgcctctaccagctgaagaggaagtgtaatggctgtcaggagcag
gacctcagcctgctggagggagagctggtggccttgttggaggatacagaccctttaggc
agcagcagccgttggctggtgcacaacggaggtgacaaaggctatgtctactccacgttc
ctgaagcagtacaaccctctgagggactcccagcgggcaaaccagaaggccaaagagcag
cagcagcctcctgtcatcacatatgaggactttgacgatctcagcctgtttgtgtcaccc
agcagcagcagcatgcgtagcctcagcctgaacaccacagacagcagctcaaccctctca
ggtctgcagggagagctggagaacgctgaagaactggaagagtcggtggatggtgacacc
caacagtattatgccgtttatgcatttcacgcacgctgtgaacaggagctgtccctgcag
gagtaccagcatgtccgcatactccagttctgtgacctgggcggaaacaagcagtggtgg
ttggctgaggccaatggacagaagggatacgtccctgctaactaccttggcagaatgtca
tatgcatga
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