Xiphophorus couchianus (Monterrey platyfish): 114144985
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Entry
114144985 CDS
T05908
Symbol
pkd2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xco03037
]
114144985 (pkd2)
04040 Ion channels [BR:
xco04040
]
114144985 (pkd2)
Cilium and associated proteins [BR:
xco03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
114144985 (pkd2)
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114144985 (pkd2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
114144985
NCBI-ProteinID:
XP_027874079
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Position
5:4187683..4199318
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AA seq
893 aa
AA seq
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MSSSRVRPQSQSGRSAQGPDSSEGIEMENIQHQDLGLGGVIGTPSPQSRQAWSRDNPVFE
PEEEIMEADWPQASPGRRSVSTASSGSSSSYNRGGSSAQIPRGGLYPTPTPTINARQQDR
HEHRSCLKQILQKIRILWGTELMEDSDSSRERYLRNVLREMLTYVGFLITVCVLTYGMVN
SNMYYYTKVMSQLFLDTPLSPGDQTTFRSLSTMEDFWKFTQGPFLGGMYWDVWYNNNSLP
ENQSFIFYENLLLGVPRLRQVKVRNESCSVHEDLRDEVQDCYNIYTPSNEDTAPFGPKNG
TAWMYTTESEMNSSSHWGQVSKYGGGGYYLDLSQTKEESSNRLQFLKDHLWLDRGTRAVF
LDFSVYNGNINLFCIGRLLVEFPATGGAVTSWHFQTVRLIRYVSSWDYFVGMCEVAFCLF
ILYYVVEEVLEVHIHRLHYFKSMWNCLDVLIVVLSVVAIIMNITRTAMARNLLSGLLENY
TAHPSFEPLASLQVQFNNLAAVIVFFSWVKLFKFINFNKTMSQLSTTMSRCAKDLTGFAI
MFFIIFLAYAQLAYLVFGTQVNDFSTFQASVFTQFRIILGDFGFSEIEESNPVLGPVYFT
TFVFFIFFILMNMFLAIINDTYSEVKADMSQQRCEMEMTDLIKKGCNKALMKLRLKKTPV
DEISSGLQQASSKMNFDELRQDLKGKGHTDAEIQAIFAKYDQDGDPELTEHEHQQMRDDL
EKEREDLELERNSLTRPSSGRSFPRTQDDSEEDDDEDSGHSSRRRGSSSGGVSNEELQVL
VRRVDRMEHSIGSIVSKIDAVIVKLEGMERAKLKRKDVLGRLLDGVMEDERLGRDTDVHR
EQTERLVREELERWESDDLGSQVSHTPVGPRARPPSSLSVDGLDVSSNGAVHV
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtctcgagtcagaccccagagccagtccggcaggtcggcccaaggaccggac
tccagcgaggggatagagatggagaacatccagcaccaagacctgggtctcggaggggtg
ataggcaccccgtctccacagtccaggcaggcgtggagccgcgacaacccggtgttcgag
ccggaggaagagatcatggaggcggactggcctcaagcgagtcccgggagaaggtcggtg
tccacggcctccagcggcagcagcagcagctacaaccgcgggggcagcagcgcccagatc
ccccgaggaggactctacccgaccccgaccccaaccatcaacgcccggcagcaggacaga
catgagcaccgcagctgtctgaagcagattctgcagaaaatcagaattctgtggggaact
gagctgatggaggacagcgacagcagcagagaacgctacctcagaaacgtcttgagggaa
atgctcacatatgttggcttcctcatcactgtttgcgttttgacgtatgggatggtgaac
tccaacatgtactattacaccaaagttatgtctcagctattcctggacacgccgctgtct
cctggggaccaaactacatttaggagcctctccaccatggaggacttctggaagttcaca
caggggcccttccttggtgggatgtactgggacgtttggtacaacaacaacagcctgcca
gagaatcagagcttcatcttctatgagaatctcctcctcggcgtaccgcggctccggcag
gtcaaggtccgcaatgagtcctgttctgtccacgaggacctgagggacgaggtccaggac
tgctataacatatacacccccagcaacgaggacaccgccccctttggtccaaagaatgga
acagcgtggatgtacaccacagagagtgagatgaatagcagcagtcactgggggcaggtg
tctaagtatggaggtggaggctactacctggacttgtctcaaacaaaagaggagtcatcc
aaccgtctgcagttcctgaaagaccacctatggctggacagaggcaccagagccgtcttc
cttgacttctcagtctacaatggaaatataaatctattctgcattggcaggttgctggtg
gagttcccggctaccggaggggctgtgacctcctggcacttccagacggtgcgtctgatc
cgatacgtgtccagctgggactactttgtgggcatgtgtgaggtggccttctgcctcttc
atcctctattacgttgtggaggaagtgctggaagtccacatccaccggctgcactacttc
aagagcatgtggaactgtcttgacgttctgatcgtagtgttgagcgttgtggctattatt
atgaacataaccagaacagccatggcccgaaacttgctgagtgggctgttggagaactac
acagctcatcccagctttgagcctctggccagcctccaggtccagttcaacaacctggca
gctgttattgtgtttttctcttgggtcaagctgtttaagttcatcaacttcaataagacc
atgagtcagctgtccaccaccatgtcccgctgcgccaaagacctcacagggttcgccatc
atgttcttcatcatcttcctggcgtatgctcagctcgcctacttggtgtttgggacacaa
gtcaatgatttcagcactttccaagccagcgtattcactcagttccgcatcattctggga
gactttggcttctcagagattgaagagtcaaacccagtgctcggacctgtttactttaca
acatttgtcttctttattttctttatattaatgaacatgttcctggctatcatcaatgac
acctactctgaggtgaaggcagacatgtcccagcagaggtgtgagatggaaatgactgac
ctcatcaagaagggctgcaacaaagctttgatgaagttaagactgaagaaaacgccggtg
gacgaaatctccagtggtttgcaacaagcgagcagtaaaatgaactttgatgagctgcgt
caggatctgaaaggaaaaggccacacagacgcagagattcaggccatctttgctaaatac
gatcaggacggcgacccggagctgacggagcacgaacaccagcagatgagagacgacttg
gagaaagagagagaggacttggagctggagcgaaattcgctgacccgacccagcagcggg
cgcagcttccctcgcacgcaggacgactcggaggaggacgatgacgaagactcgggtcac
agttcccgtcggcgcggcagcagctcaggcggcgtctcaaacgaagagcttcaagttctg
gtgaggcgagtggaccggatggagcactccatcggcagcatcgtgtcgaagatcgacgcc
gtcatagtgaagctggagggaatggagcgagctaagctgaaaagaaaagacgtgttgggc
cggctgctggacggagtcatggaggacgagcgtttgggccgcgacacggacgtccacagg
gagcagacggagcgactggtgagggaggagctggagcgctgggagtcagacgacttgggt
tcacaggtcagccacactccggtcggcccgcgggcccgtcctccatcctccctgtccgtg
gacggcctcgatgtcagctcaaacggagccgtccacgtctaa
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