Xiphophorus couchianus (Monterrey platyfish): 114144999
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Entry
114144999 CDS
T05908
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
114144999 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114144999 (mbd4)
03400 DNA repair and recombination proteins [BR:
xco03400
]
114144999 (mbd4)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
114144999 (mbd4)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
114144999 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
114144999
NCBI-ProteinID:
XP_027874144
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All DBs
Position
1:20331299..20335362
Genome browser
AA seq
451 aa
AA seq
DB search
MDVQSNKEALPHGWIREVRQRKAGKTAGKLDVYIISPSGQRFRSKSSLHDYLLKNGGENL
DINLFDFTSSKTKFTSSETDHSKETQEKWTKKQANGQQEQIGGKVKSVRHKSKNSSSSTR
CKVSKSKVKPAVEDIRSNILQEDIAEEAEQISSQATSSSDLADDDDTHKSPRRVGLLREK
ILRLAPSSDQRNTFLPAHRNQLANTPPLVPTLSVEAATESEDESENVANTDVAQAHSKGD
KSNSEVVDNADSHREEEVLPDNSGGSCTPVRDSHNRSRNLESRRKTSPYFSGKHLKDGLS
PPRRKSLRKWTPPRSPFNLIQETLFHDPWKLLVATIFLNKTSGKMAIPVLWVFFERYPSA
EVTREADWKPMSELMKPLGLYELRAKTIIRFSDEFLNKQWRYPIELHGIGKYGNDSYRIF
CVDEWRQVTPKDHKLNKYHAWLWENHKTLGI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggatgttcagagtaacaaggaagcactgccacatggatggattagagaagtgaggcag
agaaaagctggcaagactgcaggaaaactggacgtgtacataataagtcccagtgggcag
aggttccggtctaagtcgtccttgcatgattacctgttgaaaaatggaggagagaacctg
gacataaacctgtttgatttcacctcatccaaaactaaattcaccagctctgaaacagat
cattccaaagaaacacaagagaaatggacgaaaaagcaagcaaatggacagcaggaacaa
ataggtggaaaagtgaagtctgtcagacataaatctaaaaacagctcttcctctaccaga
tgtaaagtcagcaagagcaaggtaaagcctgctgttgaggatattagaagtaatattttg
caagaggacatagctgaggaggctgagcagattagctcacaagctacatcttcatcagac
ttggcggatgatgatgatacacacaagagcccccggagggtgggtctgctgagggagaaa
attctgagactggctccttccagtgatcaacgaaacaccttccttccagctcacaggaat
caactggcaaacacgccgcctttggtcccgactctgagtgttgaagctgccactgagagc
gaggatgaaagtgagaatgtggcaaacacagatgttgcacaggctcacagcaaaggtgac
aagtctaattcagaggtagtggataatgctgacagtcacagagaggaggaggtgttacct
gacaacagtggtggaagctgtacaccagttagagattcccataatagatccaggaatttg
gagagcaggcggaaaacaagcccttatttcagtgggaaacatctcaaagatggactcagc
ccacccaggagaaaatctctcagaaaatggacacctcccaggtctcccttcaacctcata
caggaaacccttttccatgacccctggaagctcctggtggccactatttttctgaataag
acaagtggaaaaatggccattccagtgctttgggtgttctttgagcgctacccgtctgca
gaggtgacccgggaggccgactggaagcccatgtctgaactcatgaagccacttgggctc
tatgagcttcgagccaaaacaatcatccgcttctccgatgagtttttaaataaacagtgg
cgttaccctattgagttgcatggtattggcaagtacgggaacgactcctacaggatcttc
tgtgttgatgagtggagacaggtgactcctaaagatcacaagttaaataaataccatgcc
tggctgtgggagaaccataaaacgttgggaatctga
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