Xiphophorus couchianus (Monterrey platyfish): 114145088
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Entry
114145088 CDS
T05908
Name
(RefSeq) multiple PDZ domain protein-like
KO
K06095
multiple PDZ domain protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
114145088
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
114145088
NCBI-ProteinID:
XP_027874275
LinkDB
All DBs
Position
5:complement(12733697..12797855)
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AA seq
1877 aa
AA seq
DB search
MEIMDAQCALEAVERLQAKLRERGEAPTQEKLSVLKTVLQSPLFLHILSLQQAQPKPPVK
GKGVSKSVSLNCGPCLDLPVGLKALSHSDSYTWAVENRKSFQKDGSNSSLGSHELSFSDI
YPDNFSHKESQYCTPPRISRTMSMGRNLSAIAHERRHVEIIELINDGKGLGFGIVGGRST
GVMVKTILPGGAAGRDTRLRSGDQILHIGDTDLAGMSSEQVAQVLRNAGSRVKLLIARDV
TKPNYLSSPALNQDTLDDKPSDLNDDYEFSVQFTKNSRGLGFSISSYVGDLNSVYSAGVM
VKSIVKGSSADQDGQMRVGDIILSVDGVSLQGCSEQRAMEVLRRTGPVVRLRLLRKAVCL
RHILPPVPPLQPLRHSHSLHEGSPYKSFLNKIQETGISSLREISRRAAYASRRPRHDPRD
GVKLTPEEEENLRKRWQDAVGHRFEVTVCQLERFSETSGLGISLEARAGHHYLCSILPEG
PVGQSDKIFTGDEIMEVNGIPLIGQTHKEVVNVLKELPVQVYLVCCRIVPPSVHDSDEEA
NDDVCLSLKELLAEFNDKLDHGCVIPCPTAEDITKRGVPPMSPPLAMWEKEAQIVELEKG
ESGLGFSILDYQDPEDASKTVLIIRSLVPGGVADQDGRLLPGDRLMFVNETDLEGSSLDY
AVHVLKSTEYGLVQIGVSKPLPLELCGGLTPIAERSARPSTDDTDSHTQVSLLAETAEAN
FNGTTWSAEDHSLSQPCYTENQLRYRCCTMEDDSGQQAPPLPPRTSFERTITVVRGNRSL
GMSVSAIKDGTGILVRSVVQGGSVCQDGRLGVGDVILAINGELASNLSSAQARSMLRRHS
VIGPEMRITYVPAHQVDEHRTRLCLPPLASISTDSPSSSPILPTPEPESLSARSSCPPAS
SALRLSASVKYKTTTAPEPPIVRATVSFKAVKGPAIVPTITLASDTSWQIPKSLQKFPNS
KAEDKDVKERDDTNEGVKVKNPQVKIKVDGKEEDNEEVCSHAAWSWDQPKSVQLTRAPSQ
SLGISIMGGRGMGRRLNSGEMMRGVFIKHISPDSPAALNGTLRVGDRILEVSGVDLRDAS
HEQAVEAIRRAGDTVHLLVQSGLDRTQSPNPINHERLSPITLSDSHNNKEAETLSSLFRL
SPANPFTPTPFKAPSPTSDRMDRRSPVNVTTAADAAAEDGDDTGRKKMLQRYGSLSGKLH
MIELEKDPAAHGLGIRLAGNEEGSRARMSVCVEGINPNGPAGLDGRVHVGDELLEINGQI
LYGRSHQNATTIINNAPSKVKIILIRNKAGQMLKRIRREDEDTVDSKMEAAEGESHGIEH
VILPQEGRIKVGDRVVAVGDGPIAGLSVEKVSSLILKDPVTVEHSISRSKTLPFLSSQSF
PSSLSHHPHLPAVSSEPRPISQSSSTSLGTEQTSPEECSHWPASSPSTSDPRSCPVLPGR
ETTIEICKENLGLGLSIVGGCDTLLGAVIIHEVNDGGAAQRDGRLQAGDQILEVNNIDLR
QATHDEAIAVLRLTTQQVRLCVFRHQEAYREEDLWDIFSLELTPRPEEGLGFTTVGKSDD
TGIFVSEIIRGSVAESDGSLLHGDQILSINGEDVRAASQDHAQRLLQECTGAVHLEVARF
KAGLQYSQRSKLCFIQSEASDCSTLTSKSGCDSSFCHQRETDNKTRSWKAELRKVTIQKG
PCDTLGIGLAGGRSSPHGNVPLFIASMDTNGLAAKTWKLETGDRILSINDVSTEGMTHDH
AEALLKNATGTISLQVAAAFEGCISQDPSEAHVSSSDPTSSCSQNNFCPRVYKTISLERG
LLGLGFSIVGGFGSPHGDLPIYVKTIFSKGAAIEDGRLKRGDQIIAVNGHCLEGVTHAEA
VEILKKTKGTVVLTVLS
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggagatcatggatgctcagtgcgccttagaagctgtggaaagactgcaagccaaactg
agggagcgaggggaggctcccactcaggaaaaactctctgtgctgaagactgtcctgcag
agccctcttttcctgcacatcctcagcttgcagcaggctcagccaaagcctccggtgaag
gggaaaggcgtttccaaatctgtgtccctgaactgtggcccatgcctggacttacctgtt
ggcctaaaggcactgagccacagcgactcgtacacttgggctgtggagaaccgaaagtct
tttcagaaggatggcagcaactcctcccttggttcacatgaattgtccttctcagatatc
tacccagacaacttttctcacaaggaatctcagtactgcactcctcctcgtatttcccgc
accatgtcgatgggtaggaacctttctgctattgcacatgagaggcgtcatgttgagata
atagagctgatcaatgatggaaaaggacttggttttggcatcgtaggaggacgcagcaca
ggtgtcatggtcaagacaatattacctggaggagcagcaggaagggacactcgcctgcgc
agcggagatcagattctgcatattggagatacagacttggcaggcatgagcagtgaacaa
gttgcacaggtgctgcgaaatgctggcagcagggtgaaacttctcattgccagggatgtt
accaaacccaattacctctcctcccctgctctgaatcaggatactttggacgacaagccc
agtgacttgaatgatgactatgagttcagtgtccagttcactaaaaatagccggggcctg
ggattttccatctcaagctatgtaggagacctgaactcagtctacagtgctggtgtgatg
gtgaaaagtatagtaaagggcagttctgcagatcaagatgggcagatgcgggttggagac
attatcctttctgtggatggtgtgagccttcagggctgcagtgaacagcgagccatggag
gtgctcaggaggactggtcctgttgtcaggctgaggttgctgagaaaggctgtctgcctt
cgtcacatcttgcccccagttcctcctctgcagcccctcagacactcccacagcctccat
gaaggcagcccttacaaatcattcctgaacaagattcaggagacaggaatcagctctctg
cgtgaaatctcccggcgagcggcatatgccagcagacgaccccgacacgatcccagagat
ggtgtgaaactcactccagaggaagaggaaaacctgaggaagaggtggcaggatgccgtt
ggacaccgatttgaagtgactgtctgtcagctggagaggttcagtgaaacaagtggtcta
ggtatcagtctggaggctcgggctggacatcactacctgtgctccatcttaccagagggg
cctgtaggtcaaagtgacaaaatctttactggagatgagataatggaagtaaatggaatc
cccctcattggacagacacacaaagaggtggtcaatgttctgaaagaactgccagtgcaa
gtataccttgtgtgctgtcgcattgtccccccttcagttcatgacagtgatgaagaagca
aacgatgatgtctgtctgagtctcaaagagctgctggctgagttcaatgacaagctggat
cacggctgtgtcataccctgtcctacagctgaggacattacaaagcgtggcgtgcccccc
atgtcacctcctctggccatgtgggagaaagaggctcaaattgttgagctggaaaaaggc
gagtcaggacttggcttcagcatcctggactaccaggatccagaggatgcctccaaaaca
gttctgataatccggtcactggttcctggaggtgtagcagatcaagatggccgcctgcta
cctggtgaccgactaatgtttgttaatgaaactgacttggagggttccagcctggattat
gctgttcatgtcctgaagtctactgaatatgggcttgttcaaattggcgtttctaaacca
ctgccgctggaactgtgtggtggcttgacacccatagcggagcgaagcgcgcggccttcg
accgatgacactgacagccacactcaggtcagcctgctagctgagacagctgaggccaat
ttcaacggcacaacttggagcgccgaggatcacagcttgagccagccgtgttacacggaa
aatcagctgcgttatcgctgctgcacaatggaagatgacagtgggcagcaagctccacct
ctgccccctcgcacaagctttgagaggacaatcactgttgtccggggcaaccgtagcctt
gggatgtcggtgagtgctatcaaggacggcacaggcattctggtccggagcgtggtccag
gggggctctgtttgccaggatggcagactgggggtgggggatgtcatcttggccataaat
ggagaacttgcctcaaatctgagcagcgcccaggccaggtccatgctccgcaggcactct
gtcatagggccagagatgaggataacctatgttccagctcatcaggtggatgagcaccga
acccgtctgtgtttgcctcctctggcgtccatctcgacagacagtccatcttcttcgccc
atcctacctacccctgagcctgaatcactctcagccagatcctcctgtcctccggcttca
tcagcgctcagattgtctgcttcagtcaaatacaaaacaacaacagctccagagccaccc
atagtcagggccactgtttcattcaaagccgttaaagggccagccatagtccccaccatc
accctagcctcagacacaagctggcagattccaaaatccctccaaaaatttccaaatagc
aaagcggaggataaagatgtaaaggagagagacgacacaaatgaaggtgtaaaagtaaaa
aacccacaggtgaaaataaaggttgatggcaaagaagaggacaatgaagaggtctgctca
catgcagcctggtcttgggatcagcctaaaagtgtgcagctgactcgagcaccgagccaa
tcgctaggtatcagcattatgggaggcagaggcatgggccgcagactgaacagtggagag
atgatgaggggtgtcttcatcaagcacatcagccccgacagccctgcagcacttaatggc
acccttagggttggggacaggatactggaggtgagtggcgtggacctgagagatgccagc
catgagcaggcagtagaagccatccgcagggcaggtgacactgtgcaccttctggttcag
tccggtctggacagaactcagtctcccaatcccatcaatcatgaaagactatctcctata
acgctgtctgactcacacaacaacaaggaggcagagactctcagcagtctgttccgtctt
tcccctgcgaaccctttcactcccaccccctttaaggccccatcgccaacatccgataga
atggatcggagaagccccgtaaatgtcacaacagcagccgatgcggcagctgaggacgga
gacgacaccggcaggaagaagatgctccagcgctatggcagcctgtcaggaaagctccac
atgattgagctggagaaggaccctgcagctcatggtttgggaattagactcgcaggcaac
gaggagggctccagggcacgaatgagtgtctgtgtggaaggaataaacccgaatgggcct
gccggtttggatgggagagtacatgttggggacgagctactggagataaatggccagatc
ttgtatggtcggagtcatcaaaatgccaccaccattatcaacaacgccccctctaaagtc
aagatcattctcatccgaaacaaagcgggccaaatgctgaagagaatcaggagagaggat
gaggacacagtggactctaagatggaagctgcagagggtgaatcacatggcattgagcat
gtcatcctaccccaggaaggcaggataaaagttggagaccgagtcgtagcagtgggtgat
ggacctatagccggactgtcagtagagaaggtgtccagtttgattctcaaagatccggtc
actgtcgagcactccatcagccgatccaagactctccctttcttatcttctcagtctttc
ccttcatcactttcccatcacccccaccttcctgctgtttcatcggagcctcgtcccatc
tctcagtcttcttctacatccctcggtacagagcaaacctctccagaagagtgctctcat
tggccagcttcaagtccttcaacctctgacccccggagctgcccggttttgcctgggagg
gaaactaccatagaaatttgcaaagaaaacttaggcctgggcctcagcatcgtaggagga
tgtgacacccttctgggggcagtaataatccatgaagtgaatgatggcggcgcagcacag
agagatggaaggctgcaggctggagaccaaatattagaggtgaataacatagacctgcgg
caggccacacatgacgaggcgattgcagtcctgcggctcaccacccaacaagttcggctg
tgtgtcttcaggcaccaggaggcctaccgggaggaagacctgtgggacatctttagtctg
gaactcacgcctcgtccagaggaaggcctgggattcaccaccgtggggaagagcgatgac
acaggcatctttgtgtcagaaatcatcagaggaagcgttgcagaatcagacggcagcttg
ctacacggcgaccagattctgtcgattaatggggaagatgttcgcgccgcatcacaggac
catgcacagagacttctacaggagtgcactggagcagtccaccttgaggtagctcgtttt
aaagctgggctccagtattcccagaggagtaagttgtgttttatccagagcgaagcctct
gactgctccactctgaccagcaaaagtggatgtgattcatctttttgccaccagagggag
acggacaacaaaacacggagctggaaagctgagctcagaaaagtaacaatacagaagggt
ccatgtgacaccctgggaataggtttagccggaggacggagtagtccccatggcaacgta
cctcttttcattgcttctatggataccaatggactggctgccaaaacatggaaattagag
acaggagacaggatcctcagcatcaacgatgtgtccacggagggaatgactcatgaccac
gctgaagccctgctcaaaaacgccaccggaaccatcagtctgcaggtggcagctgctttc
gaagggtgcatttcacaggatccaagtgaggctcatgtcagctcatcagatccaaccagc
agctgctctcagaataacttctgtccacgtgtttataagaccatcagtctggagagaggt
ttgttaggcctgggcttcagcattgtggggggatttggcagccctcatggagacctgccg
atctacgtgaaaactattttcagcaagggggcagccattgaggacggcaggctgaaacga
ggtgatcagatcattgctgtgaatggacactgcctggaaggtgtgactcatgcagaagct
gtggaaatcttaaaaaagaccaaaggaactgtagtcttaactgttctctcctga
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