Xiphophorus couchianus (Monterrey platyfish): 114145093
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Entry
114145093 CDS
T05908
Symbol
ddx39a
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114145093 (ddx39a)
Enzymes [BR:
xco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114145093 (ddx39a)
Spliceosome [BR:
xco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114145093 (ddx39a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
114145093
NCBI-ProteinID:
XP_027874281
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All DBs
Position
5:9885114..9894649
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AA seq
427 aa
AA seq
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MAENDVDNELLDYEEDDEPQGLPESGTPVNKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
IRELAFQISKEYERFSKYMPNVKVSVFFGGLAIKKDEDVLKKNCPHIVVGTPGRTLALIR
NKTLSVKNIKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVNRCV
ALSQLLVEQNFPAIAIHRGMGQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNEVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaatgacgttgataatgaacttctggactatgaggaggacgatgagccccag
ggactcccagaaagcggcacccctgtcaacaagaaggaggtgaaaggttcctatgtatcc
attcacagctcgggcttcagagacttcctccttaaaccagagctgctccgcgccattgtt
gactgcggttttgagcatccttcagaagttcaacatgagtgcattcctcaagctattctt
ggtatggatattctctgccaggcaaagtctggtatgggaaagacggctgtgtttgtgtta
gccacattgcagcagattgaacctgtggatggccaggtgtctgttcttgtgatgtgccac
atacgggaattggccttccagattagcaaagagtacgagcgcttctccaagtacatgccc
aacgtcaaggtgtctgtgttctttggcggcctggccatcaagaaggacgaggacgtcctg
aagaagaactgccctcacatcgttgtaggaactccaggtcgtacgctggccctcattcgt
aacaagactctgagtgtgaagaacatcaaacactttgtgctcgacgagtgcgataagatg
ctggagcagctggacatgaggcgtgatgtgcaggagatcttcagactgacacctcatgag
aaacaagttatgatgttcagcgcaacgctaagcaaggagatccgccccgtctgccgcaag
ttcatgcaggatcccatggaagtatttgtggacgatgagactaaactgacactgcatggc
ttacagcagtactactgcaagctgaaggacagcgagaagaacaggaagctgtttgacctt
ctcgatgtgcttgagttcaaccaggtggtgatctttgtgaagtctgtgaatcgttgcgtt
gccctgtctcagctgctggtggagcagaacttccctgctatagcaatccaccgggggatg
ggacaggaggagaggttatcccggtaccagcagtttaaagacttccagaggcggattctg
gttgccactaacctgtttggccgaggaatggacatcgagagagtcaacatagtcttcaac
tacgacatgcccgaggattctgacacatacctccacagagtggcccgtgcaggcaggttt
ggaaccaaaggcctggccatcacctttgtttcagatgagactgacgctaagaccctgaat
gaagtccaggaccgcttcgaggtcaacgtagctgagctgccagacgagatcgacatctcc
tcctacattgaacagtccagatga
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