Xiphophorus couchianus (Monterrey platyfish): 114145100
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Entry
114145100 CDS
T05908
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114145100
04020 Calcium signaling pathway
114145100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114145100
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
114145100
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
ETRAMP
RTX
Motif
Other DBs
NCBI-GeneID:
114145100
NCBI-ProteinID:
XP_027874293
LinkDB
All DBs
Position
5:35317846..35511863
Genome browser
AA seq
2294 aa
AA seq
DB search
MSEEEEGPGVAASASTQSAATAAGTAPAATKGGDGVVSSSPPRGPSPRYPVYPEEKEAEA
EEEGVVQEERLEEEEKELKVVEERDDDSDGGSSDTSVLVVPHPELVPVVFFCLKQTTCPR
SLCIRMVCSPWFERVSMMVILLNCVTLGMYQPCENIDCSSDRCQILQAFDAFIYIFFAME
MVIKMVALGIFGRRCYLGDTWNRLDFFIVMAGMVEYSLDLQNVNFTAIRTVRVLRPLKAI
NRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCYPEENFTLTT
GIGLPRPYYMADEDDERPFICSLPVDNGIMSCSDVPARREGGRACCLDKEDVVYRQSIGL
SPEPLTNNSVSVAGLCVNWNQYYTRCHTGSSNPHKGAINFDNIAYAWIVIFQVITLEGWV
EIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQREHQLMQEQRARCS
SSSTLASEPGDCYEELFQLVCHCLRKARRQTVAFFNSVRGKPRGFRGVGRGRRVGDEREK
KANGRRELERRLVSRPGHPCPHRHKQVHASSAEPVALTAASKVDGCPQCAAALELKDGVG
AVCVAGDETEEEAVDKNDNEDKQKQGTKDEDKKPPKSAENRIGCSPKKQCKELWQDTRKK
LWRIVESKYFNRGIMMAILINTISMGIEHHEQPEQLTNVLEICNIVFTSMFSMEMILKLT
AFGSFNYLRNPYNVFDGIIVIISVCEIVGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQL
VVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLKTETGDTVPDRKNFDSLLWAIV
TVFQILTQEDWNAVLYNGMAATSPLAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDAN
RSCSDDDRSSSNYDESEKRDSIKLSDPRICTLTPNGHLELGALSGSRGSYSSEKRSFTIE
SRKSSLMSLGWSSMERRSLSLRHGRSSNYHNWGRPFPPQSGWSRRSSSNSLGRRTYGFSG
APPVGGSLRVRSTCSPYSYHHASEQESLLSHPLHSHHSHHPLPPPMFLSRHFGGRRDRRA
LSLELPELLRTGGQAPAPPPIQLPDHGRKSGPGAAGSLTGGSGAGSGLGVDHRDCNGKAS
GHHNHLMTDVFPQVNARKDRADLDEETDYSLCFRIQKMMEVYKPDWCETREDWSVYMFSP
QNKFRLLCQSIIAHKLFDYVVLVFIFLNCITVALERPKILQGSLERLFLTLSNYIFTAIF
VAEMTVKVVSMGLYLGETAYLRSSWNILDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLL
RTLRPLRVISRAPGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYYCVG
SDVKNITNKTDCIRASYRWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGIDR
QPLTNNNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEEARRREEKRQRRM
EKKRRKAQKLPYYSSYGRTRLAIHALCTSHYLDLVITFIICINVITMSLEHYSQPQSLET
ALKYCNYFFTSTFVIEASLKLVAFGFRRFFKDRWNQLDLAIVLLSVMGITLEEIEINASL
PINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALG
VELFGELVCNADYPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPQHLPG
TDYGCHAGLQFISPLYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEDAEMDAEIELE
LAQGGLCCMMGNIGAIAGATGGAAAAAGVGGAVGSLGGGVTAPLQDGAGGGGSGSAHDGH
AHPRCRLYSPSQESQWLDSVSLLIKDSLEGDMIDNLSGSVFHHYCSSPVCKDCKSHPQEV
RLAEVEQASLMSEQLSDKSSSPALPDDLSLDEHSSYQLLVRDSQRGSSDSHSSEELLMQE
GRRRLYPSSSGSEEFLHPPLKRPSVEQQTSAHEKEGDENTHSGAADVASPVFQLPADFFH
PAAAAHSDGQGDSMRPRDMDPSRLASPASWASLRSPGANSRPLSSQHPSHSDSSLATGSS
DGSLQAAPDEGLGFGVCPPRHLDLPVPVLCPVAAVALRPKEQPTADRGQPPQSGRSSATQ
RKQRSHSSSGPGCPQQDCVDPSDEEAGTGTGRDGCHQALCGEHFSETLNSLSLTSLLAPG
SLAPTAMKKCNSTGSIVGSSPSARGKDGRHTCAVDPPGFSSSPWIEGRGEASLEDSNAMK
SSARHFNTKDRKKR
NT seq
6885 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggaggaggagggccctggtgttgcagcatcagcatccacgcagtcagcagcg
acagccgccgggaccgcaccagccgcaaccaaaggcggagatggcgtcgtttcgtcctcg
cccccccgcgggccctctcctcgctaccccgtctatcccgaggaaaaagaggcagaagcg
gaagaggagggcgtcgttcaggaagagaggctcgaagaagaagaaaaggagctgaaggtg
gtggaggagcgcgacgacgactccgacggcggcagcagcgacaccagtgtgctggtcgtg
ccccatcctgagctggttcctgtggtcttcttctgtctgaagcagacaacctgcccacgc
agtctgtgcatccgcatggtctgcagcccgtggttcgagcgtgtgagcatgatggtcatc
ctgctgaactgcgtgaccctggggatgtaccagccctgcgagaacatcgactgctcctca
gaccgctgccagatattacaggcgtttgatgcgttcatctacatcttctttgccatggag
atggtcataaagatggtcgctctgggaatcttcggccggcgctgctaccttggagacacg
tggaaccggctggatttcttcatcgtcatggctgggatggttgaatattccctggatttg
cagaacgtcaacttcacagccatcaggacggtgagggtgctgcggcctctcaaggccatc
aacagggtgccaagcatgcgtatcctggtgaacctgctgctcgacacgctgcccatgctg
ggtaacgtgctcctcctctgcttcttcgtcttcttcatcttcggcatcatcggggtgcag
ctgtgggcggggctgctcaggaaccgctgctacccagaggagaacttcacactgactacg
ggtatcggtctcccccgaccttactacatggccgatgaagatgacgagcggcccttcatc
tgctcgttacccgtcgacaacggcatcatgtcctgctcagatgtcccagcccgccgtgaa
ggaggccgggcctgttgtttggacaaagaggacgttgtctaccgtcagtccattggactg
agtcctgaacctttgaccaataacagcgtcagtgtagctggcctgtgcgtcaactggaac
cagtactacaccagatgtcatactggaagcagcaacccacacaaaggtgccatcaatttt
gataacattgcctatgcctggattgtcatctttcaggtgatcactctggagggctgggtg
gagatcatgtactatgtaatggatgctcactctttctacaactttatctacttcatcctc
ttaataatagtcggttccttcttcatgatcaacctgtgccttgtggtcatcgcaacccag
ttttcagagaccaagcagcgggagcaccagctcatgcaggagcagcgagctcggtgctcg
tcctcttcgacattggccagcgagccgggagattgctacgaagagctcttccagctggtc
tgccactgccttcgcaaggccaggaggcaaactgttgccttttttaacagtgtgcgaggt
aaaccccgtgggtttcggggcgttgggcgaggaagacgagtaggggatgagagggagaag
aaggccaatggaaggcgagaacttgagaggagacttgtgtccaggcctggtcatccgtgc
cctcatcgtcataaacaagtccacgcctcgtcagctgagcctgtagccctgaccgctgcc
tcgaaggtagacggttgtcctcagtgtgctgcagcactggaacttaaagacggagtggga
gctgtctgtgttgctggcgatgaaacagaggaggaagccgtggacaaaaacgacaatgag
gataaacaaaaacaaggaaccaaagacgaggacaaaaaacccccgaaaagtgccgagaac
cgtataggatgcagtccaaagaaacaatgcaaagaactttggcaggacacgaggaagaag
ctgtggagaatcgtagagagcaaatactttaaccgaggcatcatgatggccatccttatc
aacaccatcagcatggggattgagcatcatgagcagccggagcagctcaccaacgtgctg
gagatctgcaacatcgttttcaccagcatgttctccatggagatgatcctgaagctcact
gctttcggctccttcaactacttgaggaacccctacaacgtgtttgatggcatcatcgtc
atcataagcgtttgtgagattgtcggccagtcagacggcggcctgtcggtgctcaggacg
ttccggctgctgcgcgtgctgaagctggtcaggtttatgccggctctcaggagacagctg
gttgtcctcatgaagaccatggacaacgtggccaccttctgcatgctgctcatgctcttt
atcttcatctttagtatcctcgggatgcacatcttcggctgtaaattcagtctgaagaca
gaaactggggatacagtcccagacaggaagaactttgactccctgctctgggctatcgtc
accgttttccagattctgacccaggaggattggaacgccgtgttgtacaacggcatggca
gccacctcaccgctcgccgctctttacttcgtggcgctcatgacctttggaaactacgtc
ctcttcaatctgctggtggccattttggtcgaagggtttcaggcagagggcgatgcgaat
cgctcctgctccgacgacgaccgctcgtcctccaactatgatgagagtgagaaacgagac
tccattaagctgtctgatccaaggatttgtactctgacaccaaacggtcacctggagctc
ggggccctgtcgggctccagggggtcctactcctcagagaagcgcagcttcaccatcgag
tcgaggaagagcagcttgatgagcctcgggtggagcagcatggagagacgctccctttct
ctgcgccatggtcgcagttccaactaccacaactgggggcgaccttttcctccacagtct
ggatggagtcgcaggtccagctccaacagccttggtaggcggacatatggtttcagtggg
gcgccccctgttggcgggagcctgcgcgtgcgcagcacctgctccccctactcctaccac
cacgcttcggagcaggagtcccttctctcgcaccctctccactcgcatcactcccatcat
cccctgccgcccccgatgttcctctccagacatttcggaggaagacgggatcggcgggct
ctttccctggaactcccagaattgctccggacaggcggacaagctccggcaccgccgccc
attcagctccccgaccatgggagaaagagcgggcctggggcggcgggctcgctcaccgga
ggctcgggagccggcagcggtctgggagtggaccaccgtgactgcaacggcaaggcgtcg
ggtcaccacaaccatctgatgaccgatgtcttccctcaagtcaatgcacgcaaggacaga
gcagatctagatgaagaaacagactatagtttgtgcttccgtatccagaagatgatggag
gtttacaaaccagactggtgtgagactagagaggactggtctgtctacatgttctctcct
caaaacaaattcaggcttctctgtcagtccatcattgctcataagctctttgattacgtg
gtcctggtctttatcttcctcaactgcatcacagtggctctggaaaggcctaagatacta
caaggaagcctggaaagactgtttctcaccctttcaaactacatctttacggccatcttt
gtcgcagagatgacggtcaaggttgtgtccatgggcctgtacctgggagagacggcgtat
ctgaggagcagctggaacatcctggacggtttcctggtctttgtgtctctgattgatatt
gttgtgtcaatggcaggaggcgctaagatcctgggagtcctgcgcgttctccggttgctc
aggacgttacggcctctcagggttatcagcagggctccagggctgaagctggtggtggag
acgctaattacttccctcaaacccatcggaaacattgttctcatctgctgtgcctttttc
atcatctttggcattctcggagttcagctcttcaaaggcaagttttactactgcgtgggt
tcggacgtgaagaacatcacgaataaaacggactgcatccgagccagttaccgatgggtt
caccacaagtacaactttgacaaccttggacaggctcttatgtcgctgtttgttctagca
tcaaaagacggctgggttaacatcatgtaccacggactggacgcagtggggattgaccgg
cagccgttgaccaacaacaatccgtggatgctgctctacttcatctcgttcctcctgatc
gtcagcttcttcgtcctcaacatgttcgtgggtgtggtggtggagaatttccacaagtgt
cggcagcaccaggaggtggaggaggcgaggcgcagggaggaaaagcgccagcgtcgcatg
gaaaagaagaggagaaaagcccagaaactgccttactattcttcctacggccgtacccgg
ctggccatccatgctctgtgtactagccactacctggacctcgtgatcacctttattata
tgcattaacgtcatcaccatgtccctggagcactacagccagccacagtcgcttgagacc
gccctgaagtattgcaactacttcttcacctccacctttgtcattgaggcgtctctcaag
ctagtggcctttggcttccgccgcttctttaaggacaggtggaatcagctggacttggct
atagttctgctgtcggtgatgggcatcactctggaggagattgagatcaatgcctccctt
cccatcaaccccaccatcatcaggatcatgagggtgctccggatagcgcgagtgctgaaa
ttactgaaaatggcaaccggcatgagggccttgctggacacagtggtccaggctcttcct
caggtgggaaatctaggcttgctcttcatgttgctgtttttcatctacgctgctcttgga
gtggagctttttggcgagctcgtgtgtaacgccgactacccttgtgagggaatgagccgc
cacgccacatttgaaaactttgggatggcttttcttacactcttccaagtatcaacaggt
gacaactggaatggcatcatgaaggacactctgagagagtgcccacaacatctccccggc
accgactacggctgccatgctgggctgcagttcatctccccgctgtacttcgtgtcgttc
gtgctcacggctcagttcgtcctgataaacgtggtcgtcgccgtgctcatgaagcacttg
gacgactccaacaaggaggcgcaggaggacgcggagatggacgcggaaattgaactggag
ctggctcaggggggcctctgctgcatgatgggaaacatcggcgccatcgctggggcgaca
ggcggggccgcagccgcggcaggcgtggggggtgcggttgggagtctgggcggcggagta
acggcgccacttcaagacggagctggaggaggaggcagcggctctgctcacgacggacac
gcccacccgcgatgtcggctctactcgccgtctcaagagagccagtggctggacagtgtg
tctctgctgattaaggactcattggaaggggacatgattgacaacctctctgggtccgtt
tttcaccactactgctcttctcctgtctgcaaggactgcaagagtcacccgcaagaggtc
cgactggcagaggtggagcaggcatcactgatgtcagaacagctgtcagacaaatcctcc
tctccagcgttacccgatgacctcagcctggatgaacacagcagctaccagctgcttgtt
agagacagtcagaggggcagcagtgactcccacagctcagaggagttgctcatgcaggaa
ggccgcaggagactttacccctctagttcaggaagcgaagagttcctccatccgcctctt
aaacgtccttctgtggagcagcaaacctcagcacacgaaaaagaaggcgatgagaacaca
cacagtggggctgctgatgtggcttcgcccgtgtttcagctcccagcagactttttccac
ccagccgccgcagcgcattcagacggtcaaggggacagcatgaggccgagggacatggac
ccgtcccggctggcgtcccccgcctcctgggcctctctacgctctcccggagccaacagc
aggcctctgagctctcagcatccatcgcacagcgactcgtccttggccacgggcagttca
gatggcagcctgcaggccgcgccggatgaagggctcggctttggcgtgtgcccacctcga
catctggatctccccgtgcccgtcctctgcccggtcgccgccgtcgcgttgcgtcctaaa
gagcagcccacagcggaccgggggcagccaccgcagagcggacggagttctgccactcag
aggaaacagaggagccacagcagcagcggccccggctgcccccaacaggactgcgtggac
ccttcagatgaagaggcgggcacagggactggaagggacggctgccaccaggccctctgc
ggcgaacacttctcagaaacgctcaacagtctgtccctcacgtcgttgctcgccccgggc
tctctggcacccacggcgatgaagaaatgcaacagcacgggatcgatagtcggctcgagc
ccgtccgcccgaggtaaagacggccgacacacgtgcgccgtagatccccccggattctcg
tccagtccttggatcgaggggaggggagaagcgtcgctggaggacagtaacgcgatgaag
agcagcgctcggcatttcaacacaaaagacaggaaaaaaagatga
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integrated database retrieval system
