Xiphophorus couchianus (Monterrey platyfish): 114145200
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Entry
114145200 CDS
T05908
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114145200
Membrane trafficking [BR:
xco04131
]
Endocytosis
Others
Others
114145200
Endosome - Lysosome transport
114145200
Endosome - Golgi transport
114145200
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
114145200
NCBI-ProteinID:
XP_027874463
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Position
5:complement(2375599..2598709)
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AA seq
1196 aa
AA seq
DB search
METRVGTRPGSRVSLGLWLLITAHALQHARAEISCGSCPSPVQLHREELQLAPGLRSDPA
EEAVAVREARVTGRESGMLATSGPNFSLDEVKPAGSESGVAEDAAPWRAKRSAPDFSEFS
DSDWTGRTAQLDSHKAGRSEFGWNRQDERGNTRQDEPRLNSSTFALTGDSAHNHAVVYWT
GQNSSVILILTKLYDFHIGSVTESTLWRSTDYGSTYERMNDKIGSKAVLSYLYVCPTNKR
KIMVLTDPEFESSVLISTDEGASFQKYRLSFFVLSLLFHPTEEDWALAYSHDQKLYSSVD
FGRKWMLIHEHVTPNRFYWSVSGLDKEPALVHMEAHTPDGNVQYVTCRAQMCSEANRNYP
FPGYIDISSLVVQDDYIFIQVPTSGRATYYVSYKREAFIQIKLPKYSLPKDLHIVSTDGK
QVFAAVQEWNQNDTYNLYLSDTRGIFFTLAMENVKTTRGIAGNQMLDLYEVAGIKGMLIA
NKKQDNQVKTYITYNKGRDWRLLQAPTADLEGNNIHCILPSCSLHLQLQLSENPYVSGTI
STKSSAPGIIVATGNIGAELSYNNVGMFVSSDAGNNWRPIFEEEHNIWFLDKGGALVAVK
QPSVPTKHLWVSFDEGRQWTQHSFSSALLFVDGVLVEAGAENQIMTFFGHFSHRSEWQLI
KIDYKSIFSRKCTEEDYQTWHLHNKGEPCVMGQKQIYMKRRPGNYCMLGRDYSRILSAES
CICRAHDFECDYGYERRNDGNCRPAFWFNPSSVSRSCSQGQNYFNSTGYRKVVLNNCTKG
VKEMYTARKQQCPNRPPKGLSLATKDGKVTANMGSNVTFVVHLDEGDSLRTNIQLDFGDG
KAVFYSNLSWTEEGIKHVYKSAGIFRVTALAENTLGSDTTTLYLHVTCPVEHVQLLAPFV
VIRNKEVNITAVVLPSQSRTVTYFWWLGNNTEPVITLDGSVSYTFRSEGMHSITVQVAAA
NGILQDTRSIAVKEFFKSLLLSFSPNLDEFNPDIPEWRQDVGRVIKKALLQVSDFPEDQL
LVAVFPGVPTAAELFLLPNKNQSEGKKKSEEELEKASSVIVSALNQNLVEFELKPGIRVI
VYNTQLTLAPLVDSSPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNQEKE
QEMIGSVGQGDSTPKITLSEFTASKELMEKELDARVKRGVGNACESTREIPNCTSV
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggagactcgggttggcacccgcccaggctctcgcgtctctctgggtctctggctgctg
atcaccgctcatgctctccaacacgccagggcggagataagttgcggatcttgcccgtcg
cctgttcaacttcaccgggaggagctgcagctggcgccggggttgcgctccgaccccgcg
gaggaggcggttgcggtcagggaagcccgggttaccggtcgggaatctgggatgcttgct
acttctggccctaattttagtttggatgaagttaaaccagccggttctgagtctggggtg
gccgaggatgctgcgccctggagagccaagaggagcgctccagactttagcgagttcagc
gacagcgactggaccggccggaccgcgcagctggatagccacaaagctggccggtcggaa
ttcgggtggaacaggcaggatgagagagggaatacccggcaggatgagcccaggctcaac
agcagcaccttcgctctcactggggactctgcgcacaaccacgccgtggtctactggacc
ggacaaaacagcagcgtcatccttattctcaccaaactctatgactttcacatcggcagc
gtcacggagagcactctctggagatccacagattacggatcaacatacgagagaatgaac
gacaaaatcgggtccaaggcagtcctcagttacctttacgtttgcccaaccaataaaagg
aagattatggtcctgactgatccggagtttgagagcagcgtgctcatcagcactgatgag
ggagccagtttccagaagtaccgcctctccttcttcgtcctgagccttttattccacccc
acagaggaggactgggccttggcctacagccacgaccagaagttgtacagctcagtcgac
tttggaaggaagtggatgctcatccacgaacacgtcaccccgaacagattctactggtct
gtttctggactggacaaagaaccagccctggtccacatggaggctcacactccggatgga
aatgtgcagtatgtcacatgcagagctcagatgtgctctgaagccaaccggaattatcca
ttcccgggatacatcgacatcagctctctggtggttcaagatgactacattttcatacag
gttcccacctccggacgagcgacttactacgtctcctacaagagagaagctttcatacaa
atcaaactgccaaaatactccctgcctaaggatttacacatcgtcagcactgatgggaag
caggtctttgcagcagtgcaggagtggaaccaaaatgacacctacaatctctacctgtct
gacaccagagggatcttcttcaccttggccatggaaaatgtcaagacaaccaggggcatc
gctgggaaccagatgttggacctctatgaggtggctggaatcaaaggaatgctaatcgca
aacaagaagcaggacaaccaggtgaagacctacatcacctacaacaagggccgggactgg
aggctccttcaggcgccgactgcagacctggagggaaacaacatccactgcattctgcca
tcttgttcccttcatctccaactgcaactgtcagagaacccttacgtgtcgggaacgatc
tccaccaagagctctgctccggggatcatcgttgccacaggaaatattggagcagagctg
tcttataacaacgttggcatgttcgtatcatcggatgcaggcaacaactggagaccgatt
tttgaagaagagcataatatctggtttctggataaaggaggcgccctcgttgcggtgaag
cagccgtctgtgccaactaaacatctctgggtcagctttgatgaagggaggcagtggacc
cagcacagcttctcctcggcgctgctgtttgtggacggcgtgttggtggaggccggagcg
gagaaccagatcatgaccttctttggacatttcagccaccgctctgagtggcagctcatc
aagatagactacaaatccatcttcagcaggaagtgcaccgaggaagactaccaaacctgg
cacctgcacaacaagggcgagccgtgtgtaatgggtcagaagcagatttacatgaaacgc
cggcctggaaactactgcatgctgggaagggactactccagaatcctctcagctgaatcc
tgtatttgccgagctcatgattttgaatgcgattatggatacgagcggcggaacgacggg
aactgccggccggccttctggttcaatccgtcctctgtgtccagaagctgcagccagggt
cagaactacttcaacagtacagggtaccgtaaagtggtgctgaacaactgcaccaagggc
gttaaggagatgtacacggccaggaagcagcagtgccccaacaggcccccgaaaggactc
agcctggccaccaaagacgggaaagtcaccgccaacatgggcagcaacgtcacctttgtg
gtgcacctggacgagggagactctttgaggacgaacatccagctggactttggcgatggc
aaagcggtcttctactccaacctgagctggacggaggagggcatcaaacacgtctacaag
tcagcgggaatattccgtgtcacggcgctggcagagaacacgctgggctccgacaccacg
acgttgtacctgcatgtcacgtgtccggtggagcacgtccagctccttgctcccttcgtg
gtgatcagaaacaaggaggtgaacatcacagcggtggtcctgcccagccaatcacgcact
gtcacctacttctggtggcttggcaacaacacggagccggtgataactttggatggaagt
gtctcatacaccttcaggagtgaagggatgcacagcatcacggttcaagtggcggcagct
aacggcatcctgcaggacaccaggagcatcgcggtcaaagaattcttcaaatctctgctt
ttatctttctccccgaacttggacgagttcaaccccgacatacccgagtggaggcaggat
gtggggagagtaattaagaaggctctgctacaagtgtcggacttcccagaggatcagctc
ttggtcgctgtttttccaggagttccaacagctgcagaactctttctgttacccaacaag
aaccaatccgaggggaagaaaaagagtgaggaagagctagagaaggcgtccagcgtcatc
gtaagcgcactgaaccaaaaccttgtggagtttgagctgaagcctggcatcagagtcatc
gtctacaacacgcagttaacgctggcgccgctggtggactccagtcccagacacagcagc
tctgcgatgctcatgctcctctctgtggtgttcctgggcctcgccgtcttcctcatctac
aagtttaagagaaaaataccttggatcaacatatacgctgaggtgaaccaggagaaggag
caggagatgattggctcggtcggtcagggcgacagcacgccgaaaatcactctgagcgag
ttcacagcatctaaagagctcatggagaaggaactggatgcccgggtcaagagaggagtc
ggaaacgcctgcgagagcacaagggagattccaaactgtaccagcgtgtaa
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