Xiphophorus couchianus (Monterrey platyfish): 114145309
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Entry
114145309 CDS
T05908
Name
(RefSeq) zinc finger protein 585A-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114145309
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114145309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-Di19
Zap1_zf1
Zn_ribbon_19
zf-C2H2_15
zf-C2H2_2
zf_UBZ
zf-C2HC_2
GAGA
zf-met
YnfU
Nairovirus_NSm
Zf-C2H2_ZNF451_6th
zf-C2H2_fungi
zf_C2H2_ZNF598
PNMA
Retrotrans_gag
zf-C2H2_16
zf-C2H2_FBX41
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
114145309
NCBI-ProteinID:
XP_027874610
LinkDB
All DBs
Position
5:complement(39607716..39617209)
Genome browser
AA seq
1056 aa
AA seq
DB search
MCDITAELALADVKEEVSSEPRPEPLFLILPPPPPFSLVPGELTMPWPKWLKAFEHYAQA
FSEKAFGDKDMEDSSKLVLLRSFLGQEGQNVYSTLIRNQATYAIAISELTAHFSSDYSTQ
AHRLKFHQRVQMPGETVDEFVTALKNLLRLCQYGRYKNKLLLDQLIEKTNNLQLREKLLM
RKDRLTLAKALTIAKEAEPSSSGSQELDFDEVSVDIGEDSETPVQIKRKRGRPRIGEEKV
KFKAPVAEPQQKLKRGRPRLGEKKVTLEHLVTEHQQKRKRGRPRLGEKKVMSELLVTEAQ
RKSDKIKNQNSHSNDMMCYSGSEGRSQACDELDNAITSSPQIMEDEKSNQSSCCAEDNDD
SKDEDFFPPSTKGKDLCCSICINKYFKTVDKLNRHMRTHTGEKPFKCLLCDLTFSQSYHM
TRHMRNQHAAGPYICPTCGISLESLAELFKHKKTHKPQILYCPDCNEIFLNNEDLRNHVK
SHKKDLSSQTEGESSQQQPQCIEVKTETELSDISAEACEAAESHCLTKGVNSDTNSEKVV
LKKTRDNSCPICVGRRFKGPNKLARHMRTHTKEKPFSCPVCNKTFSQSYHMTRHVRIQHG
LGQYICPHCGKSFTTWLELKIHKRTHAHIDLFCLACNKQFKEKGALEKHLKLHKAVEPSP
RSLICGDCGKEFGRSYHLKRHIMSHRKAAKSDFYTCPDCKQIFYFPEDLNKHLEDHVKEN
SGTCPKCNERFGSAEELETHMQVHRKSFPCGTCGKKFKVEYALKKHEESHQHDQYYCSLC
QKHFMKLSHYKRHVQVHDRRESRCPHCNDVFLKLTAFKYHLRTHTLERPYQCSCCIETFE
QEEELEQHCLKHRKFKKERPYSCTRCDLAYSTLVELTEHMISHEGEQPQTCPFCGKTFLN
KNKLERHISIHTGERPHLCSICGNGFPSAASLKLHVFIHTGEKPFKCLQCSKSFSSSSGL
RLHSRQHMDERPSYECPECGRTYGRLTELKMHQRYHTGDKPYACTCCSKRFISKDKLNVH
MRTHTGERPFSCPHCGQTFTQTGDRNRHISKYHPMI
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacattactgcagagttagctttggcggatgtgaaggaagaagtttcttcagag
ccacgcccagaacctttgttcttaatcctgcccccaccgccacctttctctctggtccca
ggagaactcaccatgccctggccaaaatggcttaaagcttttgaacactacgctcaagca
ttcagtgaaaaagcatttggtgataaagatatggaggactccagtaagctggtgctttta
cgaagtttcctgggccaagagggacagaacgtctattcaactctgatcaggaatcaggct
acgtatgctattgctatttcagaactcactgctcattttagctctgattattccactcag
gcgcaccgccttaagttccaccaaagggttcagatgcctggagagactgtagatgagttt
gttacagccctaaaaaatctgctgaggctttgtcagtatggaaggtacaagaacaaactt
ctactagatcagctgattgagaaaacaaacaatctgcagctcagagagaagcttctgatg
aggaaagaccgtctaaccttggccaaggctctgactattgctaaagaggcagaaccttct
tcaagtggttctcaggagttggattttgatgaagtgagtgtggatattggagaggattca
gagactcctgttcaaattaagcgcaaaagaggaagacctcggatcggggaagaaaaggtt
aaatttaaggcacctgtggcggaacctcaacaaaagctcaaaagaggaaggcctcgactt
ggggagaaaaaggttacattagaacatcttgtgactgagcatcaacaaaagcgcaaacga
ggaagaccccggcttggtgagaaaaaggttatgtcagaactacttgtgactgaagcccaa
agaaaatctgacaaaatcaaaaatcagaactctcacagcaatgatatgatgtgttatagt
ggtagtgaaggtagatcccaggcttgtgatgaactagataatgctatcacctcatcacct
cagataatggaagatgaaaaaagcaaccagtcaagttgctgtgccgaagacaatgatgac
agtaaagatgaagacttcttccctccttcaactaagggaaaagacctttgctgttccatc
tgcatcaacaagtatttcaaaacagtggacaagctcaacagacacatgaggacacacact
ggtgagaaaccattcaaatgtcttctctgcgatctcacattcagtcagtcttaccacatg
accagacacatgaggaaccagcatgctgcgggcccatatatttgccccacctgtgggata
agcctggaaagcctggcagagttatttaaacacaagaagacgcacaagccacaaatcctt
tactgccctgactgtaacgaaatcttcttaaacaatgaagatcttcgtaatcatgtgaag
tcacacaagaaagacctgtcttcccaaacagagggagaaagcagtcaacaacaacctcaa
tgcattgaagtgaaaactgaaactgaattatccgatatttctgcagaagcttgtgaagct
gctgagagccattgcctgactaagggtgtcaactcagatactaactctgaaaaagttgta
ctaaagaaaactagagacaattcttgtcccatttgtgttgggaggcgcttcaaaggccca
aacaaacttgctagacacatgaggacccacacaaaggaaaaacctttcagttgccccgtc
tgcaacaagacgttcagccagtcctatcacatgacacgtcatgtgagaattcagcatggt
ctagggcagtacatctgccctcactgcgggaagagtttcaccacctggctagaactaaaa
atacacaaaaggactcatgctcacattgatcttttttgcctggcatgtaataagcagttc
aaagagaagggtgcactagaaaagcatcttaaactacacaaagcggttgagcccagccct
cgaagcctcatctgtggtgattgcggcaaagaatttggccgctcgtatcatttgaagagg
cacatcatgtctcatcgtaaagctgcaaagtctgacttttacacatgccctgactgcaag
caaatcttttatttccctgaagacctcaacaaacacctcgaagatcatgtgaaggaaaac
agtgggacgtgtcccaaatgcaacgagaggttcggcagtgcggaggaactcgagacccac
atgcaggttcatcggaagtcttttccttgtggtacctgtgggaagaagttcaaagtggag
tatgcactgaagaaacacgaggagagtcaccagcatgatcagtattactgttcattgtgt
cagaaacacttcatgaagctgtctcattataagagacacgtacaggtccacgacagacga
gaatccagatgtccacactgcaacgacgtctttctaaagcttacagctttcaaatatcac
cttcggacgcacactctggaaaggccgtaccagtgcagttgctgcattgagaccttcgag
caggaggaggaattggagcagcactgcctcaaacacaggaagtttaagaaagagaggcct
tattcatgcacacgctgtgaccttgcttactcaactttggtggaactgactgagcacatg
atctctcacgagggagagcagccacagacctgtcccttttgtggcaaaaccttcctgaac
aagaacaagctggagcggcacataagtatccataccggcgagaggccccacctgtgctcc
atctgcggtaacggtttcccttcggccgccagtctcaagctgcacgtcttcattcacacc
ggggagaaacccttcaagtgcctgcagtgcagcaagagcttcagctcctccagcggcttg
cgtctccacagcaggcagcacatggatgagcgacccagctatgagtgtccggagtgtggc
aggacgtacggccgcctgacagagctgaagatgcaccagcgctaccacaccggggataaa
ccgtacgcatgcacctgctgtagcaaacgctttattagcaaagacaagctgaacgttcat
atgagaacgcacacgggagagagacccttttcctgccctcactgtgggcaaacctttaca
caaactggggacagaaacagacacatcagtaaatatcaccctatgatctaa
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integrated database retrieval system
