Xiphophorus couchianus (Monterrey platyfish): 114145311
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Entry
114145311 CDS
T05908
Name
(RefSeq) CD209 antigen-like protein E
KO
K06563
C-type lectin domain family 4 member L/M
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03260
Virion - Human immunodeficiency virus
xco03264
Virion - Flavivirus
xco04145
Phagosome
xco04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03260 Virion - Human immunodeficiency virus
114145311
03264 Virion - Flavivirus
114145311
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114145311
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
114145311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114145311
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xco04054
]
114145311
04090 CD molecules [BR:
xco04090
]
114145311
04091 Lectins [BR:
xco04091
]
114145311
Membrane trafficking [BR:
xco04131
]
Endocytosis
Phagocytosis
C-lectin receptors
114145311
Pattern recognition receptors [BR:
xco04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
114145311
CD molecules [BR:
xco04090
]
Proteins
114145311
Lectins [BR:
xco04091
]
C-Type lectins
Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
DC-SIGN subgroup
114145311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
KASH_CCD
CENP-F_leu_zip
SNF2_assoc
JIP_LZII
Motif
Other DBs
NCBI-GeneID:
114145311
NCBI-ProteinID:
XP_027874614
LinkDB
All DBs
Position
5:33585452..33589420
Genome browser
AA seq
237 aa
AA seq
DB search
MSVLQRNTLTAERDALKKINVAREATSRSLTIERDDLKRQLKTCTSQQISLTNERDGLKR
TNSGIEAKSQRLSVEKSQLSIELTTCIFEKLGLTTEKNELTKKLSDFAKFAQAQWVYFSG
SFYYISTTQKSWQSSQYFCQYQGADLVIINSREEEQFTRKFQKRAWIGLTDRIQEGSWKW
VDGTALTQSYWRFGEPNHFKARNEDCVEIQNFDSERNWNDAQCANDNYWICEKNFDI
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttttacagcgcaacacgttgactgcagagagagacgcgttgaagaagatcaat
gttgctagggaggcaacatccagaagtctcacaatagaaagagacgacttaaagaggcag
ctgaaaacctgcacttcacagcaaatttcacttactaatgagagggacggactgaagagg
acaaactctggtattgaagccaagtctcaaagactatcggtggaaaagagtcaactcagc
attgagcttactacctgcatattcgagaagttaggcctgactactgagaaaaatgagctg
accaagaagctgagtgattttgctaaatttgcgcaggcacaatgggtgtatttcagtggt
agcttctattatatttctacaacccagaagtcctggcaaagcagtcaatatttctgccag
tatcaaggagccgacctggtgatcataaacagcagagaagaagagcaattcacaagaaag
tttcaaaagagagcctggattggtcttactgatagaatacaagaggggtcctggaaatgg
gtggatgggactgcgctaacacaaagctactggcgctttggagagcctaaccattttaaa
gccagaaatgaggactgtgtggagatacagaactttgactccgaacgcaactggaatgat
gctcaatgtgcaaacgataactactggatctgtgaaaagaactttgatatttaa
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